Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05965 and MPMX19_05966 are separated by 319 nucleotides MPMX19_05966 and MPMX19_05967 are separated by 187 nucleotides
MPMX19_05965: MPMX19_05965 - Glycerol-3-phosphate regulon repressor, at 114,453 to 115,268
_05965
MPMX19_05966: MPMX19_05966 - hypothetical protein, at 115,588 to 117,765
_05966
MPMX19_05967: MPMX19_05967 - D-erythritol 1-phosphate dehydrogenase, at 117,953 to 119,524
_05967
Position (kb)
115
116
117
118 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 114.706 kb on + strand, within MPMX19_05965 at 114.706 kb on + strand, within MPMX19_05965 at 114.706 kb on + strand, within MPMX19_05965 at 114.707 kb on - strand, within MPMX19_05965 at 114.707 kb on - strand, within MPMX19_05965 at 114.769 kb on + strand, within MPMX19_05965 at 114.769 kb on + strand, within MPMX19_05965 at 114.769 kb on + strand, within MPMX19_05965 at 114.769 kb on + strand, within MPMX19_05965 at 114.770 kb on - strand, within MPMX19_05965 at 114.770 kb on - strand, within MPMX19_05965 at 115.057 kb on + strand, within MPMX19_05965 at 115.057 kb on + strand, within MPMX19_05965 at 115.057 kb on + strand, within MPMX19_05965 at 115.057 kb on + strand, within MPMX19_05965 at 115.057 kb on + strand, within MPMX19_05965 at 115.058 kb on - strand, within MPMX19_05965 at 115.058 kb on - strand, within MPMX19_05965 at 115.058 kb on - strand, within MPMX19_05965 at 115.058 kb on - strand, within MPMX19_05965 at 115.376 kb on + strand at 115.376 kb on + strand at 115.377 kb on - strand at 115.433 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.434 kb on + strand at 115.435 kb on - strand at 115.435 kb on - strand at 115.435 kb on - strand at 115.435 kb on - strand at 115.435 kb on - strand at 115.435 kb on - strand at 115.435 kb on - strand at 115.435 kb on - strand at 115.435 kb on - strand at 115.435 kb on - strand at 115.563 kb on + strand at 115.574 kb on + strand at 115.574 kb on + strand at 115.574 kb on + strand at 115.575 kb on - strand at 115.575 kb on - strand at 115.575 kb on - strand at 115.575 kb on - strand at 115.575 kb on - strand at 115.585 kb on + strand at 115.585 kb on + strand at 115.585 kb on + strand at 115.585 kb on + strand at 115.585 kb on + strand at 115.585 kb on + strand at 115.585 kb on + strand at 115.586 kb on - strand at 115.586 kb on - strand at 115.587 kb on + strand at 115.587 kb on + strand at 115.587 kb on + strand at 115.588 kb on - strand at 115.588 kb on - strand at 116.344 kb on + strand, within MPMX19_05966 at 116.344 kb on + strand, within MPMX19_05966 at 116.344 kb on + strand, within MPMX19_05966 at 116.345 kb on - strand, within MPMX19_05966 at 116.345 kb on - strand, within MPMX19_05966 at 116.345 kb on - strand, within MPMX19_05966 at 116.345 kb on - strand, within MPMX19_05966 at 116.345 kb on - strand, within MPMX19_05966 at 116.345 kb on - strand, within MPMX19_05966 at 116.704 kb on + strand, within MPMX19_05966 at 116.704 kb on + strand, within MPMX19_05966 at 116.704 kb on + strand, within MPMX19_05966 at 116.704 kb on + strand, within MPMX19_05966 at 116.704 kb on + strand, within MPMX19_05966 at 116.704 kb on + strand, within MPMX19_05966 at 116.704 kb on + strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 116.705 kb on - strand, within MPMX19_05966 at 117.321 kb on + strand, within MPMX19_05966 at 117.321 kb on + strand, within MPMX19_05966 at 117.321 kb on + strand, within MPMX19_05966 at 117.322 kb on - strand, within MPMX19_05966 at 117.322 kb on - strand, within MPMX19_05966 at 117.322 kb on - strand, within MPMX19_05966 at 117.322 kb on - strand, within MPMX19_05966 at 117.798 kb on + strand at 117.798 kb on + strand at 117.798 kb on + strand at 117.798 kb on + strand at 117.798 kb on + strand at 117.799 kb on - strand at 117.799 kb on - strand at 117.799 kb on - strand at 117.799 kb on - strand at 117.799 kb on - strand at 117.799 kb on - strand at 117.799 kb on - strand at 117.831 kb on - strand at 117.891 kb on + strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 117.892 kb on - strand at 118.128 kb on - strand, within MPMX19_05967 at 118.137 kb on - strand, within MPMX19_05967 at 118.287 kb on - strand, within MPMX19_05967 at 118.710 kb on - strand, within MPMX19_05967 at 118.710 kb on - strand, within MPMX19_05967 at 118.710 kb on - strand, within MPMX19_05967 at 118.710 kb on - strand, within MPMX19_05967 at 118.710 kb on - strand, within MPMX19_05967 at 118.710 kb on - strand, within MPMX19_05967 at 118.710 kb on - strand, within MPMX19_05967 at 118.755 kb on - strand, within MPMX19_05967 at 118.755 kb on - strand, within MPMX19_05967
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 114,706 + MPMX19_05965 0.31 +1.1 114,706 + MPMX19_05965 0.31 -1.0 114,706 + MPMX19_05965 0.31 -0.5 114,707 - MPMX19_05965 0.31 +0.7 114,707 - MPMX19_05965 0.31 -0.7 114,769 + MPMX19_05965 0.39 -0.6 114,769 + MPMX19_05965 0.39 +0.2 114,769 + MPMX19_05965 0.39 +0.4 114,769 + MPMX19_05965 0.39 -0.8 114,770 - MPMX19_05965 0.39 +0.7 114,770 - MPMX19_05965 0.39 -0.3 115,057 + MPMX19_05965 0.74 -1.7 115,057 + MPMX19_05965 0.74 -1.1 115,057 + MPMX19_05965 0.74 -0.7 115,057 + MPMX19_05965 0.74 +1.0 115,057 + MPMX19_05965 0.74 +1.3 115,058 - MPMX19_05965 0.74 -1.0 115,058 - MPMX19_05965 0.74 +0.6 115,058 - MPMX19_05965 0.74 -0.3 115,058 - MPMX19_05965 0.74 +0.4 115,376 + -0.6 115,376 + -0.6 115,377 - +0.6 115,433 + -1.9 115,434 + -0.4 115,434 + +1.2 115,434 + -0.7 115,434 + -2.0 115,434 + -0.8 115,434 + +1.3 115,434 + -1.1 115,434 + -0.8 115,434 + -0.6 115,434 + -1.7 115,434 + -0.4 115,434 + +0.1 115,434 + -1.1 115,434 + -0.8 115,434 + -0.7 115,434 + +1.0 115,435 - -0.4 115,435 - +1.6 115,435 - -0.9 115,435 - +0.3 115,435 - -1.1 115,435 - -1.1 115,435 - +0.4 115,435 - -0.6 115,435 - -1.8 115,435 - +0.1 115,563 + +0.0 115,574 + -1.3 115,574 + -1.1 115,574 + +0.7 115,575 - +0.3 115,575 - -0.6 115,575 - +0.0 115,575 - -2.2 115,575 - +0.6 115,585 + -1.4 115,585 + -1.9 115,585 + +1.3 115,585 + -0.8 115,585 + -1.4 115,585 + +0.4 115,585 + -1.1 115,586 - -0.3 115,586 - -2.4 115,587 + -2.1 115,587 + +1.0 115,587 + -3.1 115,588 - +1.0 115,588 - +0.0 116,344 + MPMX19_05966 0.35 -2.1 116,344 + MPMX19_05966 0.35 -0.6 116,344 + MPMX19_05966 0.35 -1.1 116,345 - MPMX19_05966 0.35 -1.3 116,345 - MPMX19_05966 0.35 -0.0 116,345 - MPMX19_05966 0.35 -0.9 116,345 - MPMX19_05966 0.35 +0.0 116,345 - MPMX19_05966 0.35 +0.4 116,345 - MPMX19_05966 0.35 +0.8 116,704 + MPMX19_05966 0.51 -0.1 116,704 + MPMX19_05966 0.51 -0.0 116,704 + MPMX19_05966 0.51 -2.1 116,704 + MPMX19_05966 0.51 -0.6 116,704 + MPMX19_05966 0.51 -0.8 116,704 + MPMX19_05966 0.51 -0.6 116,704 + MPMX19_05966 0.51 +0.0 116,705 - MPMX19_05966 0.51 +0.7 116,705 - MPMX19_05966 0.51 -0.2 116,705 - MPMX19_05966 0.51 -0.3 116,705 - MPMX19_05966 0.51 -0.8 116,705 - MPMX19_05966 0.51 -1.0 116,705 - MPMX19_05966 0.51 -1.0 116,705 - MPMX19_05966 0.51 -1.6 116,705 - MPMX19_05966 0.51 -1.9 116,705 - MPMX19_05966 0.51 -1.3 116,705 - MPMX19_05966 0.51 +0.2 116,705 - MPMX19_05966 0.51 -0.2 116,705 - MPMX19_05966 0.51 -0.8 116,705 - MPMX19_05966 0.51 -1.3 116,705 - MPMX19_05966 0.51 +0.8 116,705 - MPMX19_05966 0.51 +0.9 117,321 + MPMX19_05966 0.80 +0.2 117,321 + MPMX19_05966 0.80 +0.1 117,321 + MPMX19_05966 0.80 -0.6 117,322 - MPMX19_05966 0.80 -0.4 117,322 - MPMX19_05966 0.80 +1.7 117,322 - MPMX19_05966 0.80 -0.8 117,322 - MPMX19_05966 0.80 -0.9 117,798 + -0.6 117,798 + +1.3 117,798 + +0.1 117,798 + -1.3 117,798 + +1.0 117,799 - +0.6 117,799 - -0.1 117,799 - +0.3 117,799 - -1.1 117,799 - -1.8 117,799 - +2.0 117,799 - +1.5 117,831 - +0.6 117,891 + -1.3 117,892 - -0.7 117,892 - -0.3 117,892 - -0.3 117,892 - -0.9 117,892 - +0.7 117,892 - -1.0 117,892 - -1.6 117,892 - -0.2 117,892 - -2.8 117,892 - -0.7 117,892 - +0.0 117,892 - +0.3 117,892 - -0.7 117,892 - -1.0 117,892 - +0.3 118,128 - MPMX19_05967 0.11 -0.6 118,137 - MPMX19_05967 0.12 +1.2 118,287 - MPMX19_05967 0.21 +0.3 118,710 - MPMX19_05967 0.48 -0.3 118,710 - MPMX19_05967 0.48 -1.1 118,710 - MPMX19_05967 0.48 +0.0 118,710 - MPMX19_05967 0.48 -1.0 118,710 - MPMX19_05967 0.48 +0.0 118,710 - MPMX19_05967 0.48 +0.0 118,710 - MPMX19_05967 0.48 +0.5 118,755 - MPMX19_05967 0.51 -1.1 118,755 - MPMX19_05967 0.51 +2.0
Or see this region's nucleotide sequence