Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05725 and MPMX19_05726 are separated by 13 nucleotides MPMX19_05726 and MPMX19_05727 are separated by 103 nucleotides
MPMX19_05725: MPMX19_05725 - hypothetical protein, at 443,522 to 444,949
_05725
MPMX19_05726: MPMX19_05726 - hypothetical protein, at 444,963 to 445,739
_05726
MPMX19_05727: MPMX19_05727 - Phosphoribosylaminoimidazole-succinocarboxamide synthase, at 445,843 to 446,823
_05727
Position (kb) 444
445
446 Strain fitness (log2 ratio) -2
-1
0
1
2 at 444.242 kb on + strand, within MPMX19_05725 at 444.242 kb on + strand, within MPMX19_05725 at 444.242 kb on + strand, within MPMX19_05725 at 444.603 kb on - strand, within MPMX19_05725 at 444.674 kb on + strand, within MPMX19_05725 at 444.675 kb on - strand, within MPMX19_05725 at 444.678 kb on - strand, within MPMX19_05725 at 444.952 kb on + strand at 444.952 kb on + strand at 444.952 kb on + strand at 444.952 kb on + strand at 444.952 kb on + strand at 444.952 kb on + strand at 444.952 kb on + strand at 444.952 kb on + strand at 444.952 kb on + strand at 444.952 kb on + strand at 444.953 kb on - strand at 444.953 kb on - strand at 444.953 kb on - strand at 444.953 kb on - strand at 444.953 kb on - strand at 444.953 kb on - strand at 444.953 kb on - strand at 445.457 kb on - strand, within MPMX19_05726 at 445.457 kb on - strand, within MPMX19_05726 at 445.457 kb on - strand, within MPMX19_05726 at 445.678 kb on + strand at 445.678 kb on + strand at 445.678 kb on + strand at 445.678 kb on + strand at 445.678 kb on + strand at 445.678 kb on + strand at 445.678 kb on + strand at 445.678 kb on + strand at 445.678 kb on + strand at 445.678 kb on + strand at 445.678 kb on + strand at 445.678 kb on + strand at 445.678 kb on + strand at 445.679 kb on - strand at 445.679 kb on - strand at 445.679 kb on - strand at 445.679 kb on - strand at 445.679 kb on - strand at 445.679 kb on - strand at 445.679 kb on - strand at 445.679 kb on - strand at 445.679 kb on - strand at 445.679 kb on - strand at 445.679 kb on - strand at 445.679 kb on - strand at 445.679 kb on - strand at 445.760 kb on + strand at 445.760 kb on + strand at 445.761 kb on - strand at 445.761 kb on - strand at 445.761 kb on - strand at 445.761 kb on - strand at 445.765 kb on + strand at 445.765 kb on + strand at 445.765 kb on + strand at 445.765 kb on + strand at 445.765 kb on + strand at 445.765 kb on + strand at 445.766 kb on - strand at 445.766 kb on - strand at 445.766 kb on - strand at 445.795 kb on + strand at 445.946 kb on - strand, within MPMX19_05727 at 445.946 kb on - strand, within MPMX19_05727 at 446.176 kb on + strand, within MPMX19_05727 at 446.176 kb on + strand, within MPMX19_05727 at 446.176 kb on + strand, within MPMX19_05727 at 446.176 kb on + strand, within MPMX19_05727 at 446.176 kb on + strand, within MPMX19_05727 at 446.176 kb on + strand, within MPMX19_05727 at 446.176 kb on + strand, within MPMX19_05727 at 446.176 kb on + strand, within MPMX19_05727 at 446.176 kb on + strand, within MPMX19_05727 at 446.176 kb on + strand, within MPMX19_05727 at 446.177 kb on - strand, within MPMX19_05727 at 446.177 kb on - strand, within MPMX19_05727 at 446.177 kb on - strand, within MPMX19_05727 at 446.177 kb on - strand, within MPMX19_05727 at 446.177 kb on - strand, within MPMX19_05727 at 446.177 kb on - strand, within MPMX19_05727 at 446.177 kb on - strand, within MPMX19_05727 at 446.178 kb on + strand, within MPMX19_05727 at 446.178 kb on + strand, within MPMX19_05727 at 446.178 kb on + strand, within MPMX19_05727 at 446.178 kb on + strand, within MPMX19_05727 at 446.179 kb on - strand, within MPMX19_05727 at 446.179 kb on - strand, within MPMX19_05727 at 446.215 kb on + strand, within MPMX19_05727 at 446.215 kb on + strand, within MPMX19_05727 at 446.215 kb on + strand, within MPMX19_05727 at 446.215 kb on + strand, within MPMX19_05727 at 446.215 kb on + strand, within MPMX19_05727 at 446.216 kb on - strand, within MPMX19_05727 at 446.216 kb on - strand, within MPMX19_05727 at 446.216 kb on - strand, within MPMX19_05727 at 446.216 kb on - strand, within MPMX19_05727 at 446.216 kb on - strand, within MPMX19_05727 at 446.216 kb on - strand, within MPMX19_05727 at 446.216 kb on - strand, within MPMX19_05727 at 446.239 kb on + strand, within MPMX19_05727 at 446.239 kb on + strand, within MPMX19_05727 at 446.239 kb on + strand, within MPMX19_05727 at 446.239 kb on + strand, within MPMX19_05727 at 446.239 kb on + strand, within MPMX19_05727 at 446.239 kb on + strand, within MPMX19_05727 at 446.239 kb on + strand, within MPMX19_05727 at 446.240 kb on - strand, within MPMX19_05727 at 446.240 kb on - strand, within MPMX19_05727 at 446.479 kb on + strand, within MPMX19_05727 at 446.479 kb on + strand, within MPMX19_05727 at 446.479 kb on + strand, within MPMX19_05727 at 446.480 kb on - strand, within MPMX19_05727 at 446.480 kb on - strand, within MPMX19_05727 at 446.551 kb on + strand, within MPMX19_05727 at 446.569 kb on + strand, within MPMX19_05727 at 446.569 kb on + strand, within MPMX19_05727 at 446.570 kb on - strand, within MPMX19_05727 at 446.570 kb on - strand, within MPMX19_05727 at 446.713 kb on + strand, within MPMX19_05727 at 446.713 kb on + strand, within MPMX19_05727 at 446.714 kb on - strand, within MPMX19_05727
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 444,242 + MPMX19_05725 0.50 +0.4 444,242 + MPMX19_05725 0.50 +1.0 444,242 + MPMX19_05725 0.50 -0.0 444,603 - MPMX19_05725 0.76 -0.6 444,674 + MPMX19_05725 0.81 +1.0 444,675 - MPMX19_05725 0.81 +0.4 444,678 - MPMX19_05725 0.81 +1.4 444,952 + -0.3 444,952 + -0.0 444,952 + -0.8 444,952 + -1.1 444,952 + -1.9 444,952 + +0.3 444,952 + -1.2 444,952 + +0.8 444,952 + +0.1 444,952 + -0.5 444,953 - +0.4 444,953 - +0.3 444,953 - -0.8 444,953 - -0.1 444,953 - -0.1 444,953 - -0.6 444,953 - -0.3 445,457 - MPMX19_05726 0.64 +0.4 445,457 - MPMX19_05726 0.64 -0.0 445,457 - MPMX19_05726 0.64 +0.1 445,678 + -1.1 445,678 + -0.8 445,678 + -1.5 445,678 + -1.2 445,678 + -0.4 445,678 + -2.4 445,678 + -0.1 445,678 + -0.6 445,678 + -0.0 445,678 + -0.6 445,678 + +1.0 445,678 + -1.0 445,678 + +1.5 445,679 - -0.0 445,679 - -0.1 445,679 - +0.8 445,679 - -1.3 445,679 - -2.1 445,679 - +1.0 445,679 - -0.1 445,679 - +1.0 445,679 - -0.2 445,679 - +1.2 445,679 - -1.3 445,679 - +2.0 445,679 - -1.3 445,760 + +0.2 445,760 + -0.4 445,761 - -1.0 445,761 - -0.5 445,761 - -0.2 445,761 - -1.5 445,765 + +1.3 445,765 + +1.2 445,765 + -0.5 445,765 + +0.3 445,765 + +1.2 445,765 + -1.6 445,766 - -0.2 445,766 - +0.8 445,766 - -0.7 445,795 + +0.7 445,946 - MPMX19_05727 0.10 -0.0 445,946 - MPMX19_05727 0.10 +2.0 446,176 + MPMX19_05727 0.34 -0.8 446,176 + MPMX19_05727 0.34 +0.2 446,176 + MPMX19_05727 0.34 -1.3 446,176 + MPMX19_05727 0.34 -1.0 446,176 + MPMX19_05727 0.34 -1.7 446,176 + MPMX19_05727 0.34 +0.6 446,176 + MPMX19_05727 0.34 +0.2 446,176 + MPMX19_05727 0.34 +0.2 446,176 + MPMX19_05727 0.34 -0.6 446,176 + MPMX19_05727 0.34 -1.9 446,177 - MPMX19_05727 0.34 -0.4 446,177 - MPMX19_05727 0.34 -0.0 446,177 - MPMX19_05727 0.34 +0.7 446,177 - MPMX19_05727 0.34 -0.1 446,177 - MPMX19_05727 0.34 -0.0 446,177 - MPMX19_05727 0.34 -1.0 446,177 - MPMX19_05727 0.34 -1.3 446,178 + MPMX19_05727 0.34 +0.1 446,178 + MPMX19_05727 0.34 -1.3 446,178 + MPMX19_05727 0.34 -0.5 446,178 + MPMX19_05727 0.34 -1.7 446,179 - MPMX19_05727 0.34 +1.6 446,179 - MPMX19_05727 0.34 -0.8 446,215 + MPMX19_05727 0.38 -0.7 446,215 + MPMX19_05727 0.38 -0.9 446,215 + MPMX19_05727 0.38 +0.8 446,215 + MPMX19_05727 0.38 -0.8 446,215 + MPMX19_05727 0.38 -0.3 446,216 - MPMX19_05727 0.38 -1.2 446,216 - MPMX19_05727 0.38 -0.4 446,216 - MPMX19_05727 0.38 -1.0 446,216 - MPMX19_05727 0.38 -0.8 446,216 - MPMX19_05727 0.38 -0.9 446,216 - MPMX19_05727 0.38 -1.0 446,216 - MPMX19_05727 0.38 -2.3 446,239 + MPMX19_05727 0.40 -0.6 446,239 + MPMX19_05727 0.40 +0.2 446,239 + MPMX19_05727 0.40 -0.3 446,239 + MPMX19_05727 0.40 -1.6 446,239 + MPMX19_05727 0.40 +0.2 446,239 + MPMX19_05727 0.40 -0.5 446,239 + MPMX19_05727 0.40 -0.8 446,240 - MPMX19_05727 0.40 -1.1 446,240 - MPMX19_05727 0.40 +0.2 446,479 + MPMX19_05727 0.65 -1.5 446,479 + MPMX19_05727 0.65 -0.2 446,479 + MPMX19_05727 0.65 -0.1 446,480 - MPMX19_05727 0.65 -0.5 446,480 - MPMX19_05727 0.65 -0.0 446,551 + MPMX19_05727 0.72 -1.6 446,569 + MPMX19_05727 0.74 -0.0 446,569 + MPMX19_05727 0.74 -0.8 446,570 - MPMX19_05727 0.74 +0.4 446,570 - MPMX19_05727 0.74 +1.1 446,713 + MPMX19_05727 0.89 -1.6 446,713 + MPMX19_05727 0.89 -0.4 446,714 - MPMX19_05727 0.89 -0.5
Or see this region's nucleotide sequence