Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05706 and MPMX19_05707 are separated by 134 nucleotides MPMX19_05707 and MPMX19_05708 are separated by 351 nucleotides
MPMX19_05706: MPMX19_05706 - hypothetical protein, at 423,331 to 425,361
_05706
MPMX19_05707: MPMX19_05707 - Homoserine/homoserine lactone efflux protein, at 425,496 to 426,131
_05707
MPMX19_05708: MPMX19_05708 - hypothetical protein, at 426,483 to 428,561
_05708
Position (kb) 425
426
427 Strain fitness (log2 ratio) -2
-1
0
1
2 at 424.783 kb on + strand, within MPMX19_05706 at 424.783 kb on + strand, within MPMX19_05706 at 424.783 kb on + strand, within MPMX19_05706 at 424.783 kb on + strand, within MPMX19_05706 at 424.783 kb on + strand, within MPMX19_05706 at 424.783 kb on + strand, within MPMX19_05706 at 424.783 kb on + strand, within MPMX19_05706 at 424.784 kb on - strand, within MPMX19_05706 at 424.784 kb on - strand, within MPMX19_05706 at 424.784 kb on - strand, within MPMX19_05706 at 425.023 kb on + strand, within MPMX19_05706 at 425.023 kb on + strand, within MPMX19_05706 at 425.023 kb on + strand, within MPMX19_05706 at 425.023 kb on + strand, within MPMX19_05706 at 425.023 kb on + strand, within MPMX19_05706 at 425.023 kb on + strand, within MPMX19_05706 at 425.023 kb on + strand, within MPMX19_05706 at 425.023 kb on + strand, within MPMX19_05706 at 425.024 kb on - strand, within MPMX19_05706 at 425.024 kb on - strand, within MPMX19_05706 at 425.024 kb on - strand, within MPMX19_05706 at 425.290 kb on + strand at 425.290 kb on + strand at 425.290 kb on + strand at 425.290 kb on + strand at 425.290 kb on + strand at 425.290 kb on + strand at 425.290 kb on + strand at 425.290 kb on + strand at 425.290 kb on + strand at 425.290 kb on + strand at 425.290 kb on + strand at 425.290 kb on + strand at 425.290 kb on + strand at 425.290 kb on + strand at 425.291 kb on - strand at 425.291 kb on - strand at 425.291 kb on - strand at 425.291 kb on - strand at 425.291 kb on - strand at 425.291 kb on - strand at 425.291 kb on - strand at 425.291 kb on - strand at 425.291 kb on - strand at 425.469 kb on + strand at 425.469 kb on + strand at 425.469 kb on + strand at 425.469 kb on + strand at 425.469 kb on + strand at 425.470 kb on - strand at 425.470 kb on - strand at 425.470 kb on - strand at 425.470 kb on - strand at 425.739 kb on + strand, within MPMX19_05707 at 425.739 kb on + strand, within MPMX19_05707 at 425.740 kb on - strand, within MPMX19_05707 at 425.740 kb on - strand, within MPMX19_05707 at 425.740 kb on - strand, within MPMX19_05707 at 425.740 kb on - strand, within MPMX19_05707 at 425.740 kb on - strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.003 kb on + strand, within MPMX19_05707 at 426.004 kb on - strand, within MPMX19_05707 at 426.004 kb on - strand, within MPMX19_05707 at 426.004 kb on - strand, within MPMX19_05707 at 426.004 kb on - strand, within MPMX19_05707 at 426.004 kb on - strand, within MPMX19_05707 at 426.004 kb on - strand, within MPMX19_05707 at 426.004 kb on - strand, within MPMX19_05707 at 426.004 kb on - strand, within MPMX19_05707 at 426.004 kb on - strand, within MPMX19_05707 at 426.004 kb on - strand, within MPMX19_05707 at 426.194 kb on + strand at 426.194 kb on + strand at 426.195 kb on - strand at 426.196 kb on + strand at 426.196 kb on + strand at 426.196 kb on + strand at 426.196 kb on + strand at 426.196 kb on + strand at 426.196 kb on + strand at 426.196 kb on + strand at 426.196 kb on + strand at 426.197 kb on - strand at 426.197 kb on - strand at 426.197 kb on - strand at 426.197 kb on - strand at 426.197 kb on - strand at 426.197 kb on - strand at 426.197 kb on - strand at 426.197 kb on - strand at 426.197 kb on - strand at 426.197 kb on - strand at 426.197 kb on - strand at 426.197 kb on - strand at 426.201 kb on + strand at 426.202 kb on - strand at 426.238 kb on + strand at 426.238 kb on + strand at 426.238 kb on + strand at 426.239 kb on - strand at 426.239 kb on - strand at 426.239 kb on - strand at 426.239 kb on - strand at 426.239 kb on - strand at 426.239 kb on - strand at 426.263 kb on - strand at 426.265 kb on + strand at 426.266 kb on - strand at 426.300 kb on + strand at 426.301 kb on - strand at 426.306 kb on + strand at 426.316 kb on + strand at 426.317 kb on - strand at 426.317 kb on - strand at 426.332 kb on + strand at 426.332 kb on + strand at 426.332 kb on + strand at 426.332 kb on + strand at 426.333 kb on - strand at 426.333 kb on - strand at 426.397 kb on + strand at 426.397 kb on + strand at 426.397 kb on + strand at 426.397 kb on + strand at 426.398 kb on - strand at 426.398 kb on - strand at 426.398 kb on - strand at 426.398 kb on - strand at 426.398 kb on - strand at 426.398 kb on - strand at 426.398 kb on - strand at 426.431 kb on + strand at 426.432 kb on - strand at 426.470 kb on + strand at 426.470 kb on + strand at 426.470 kb on + strand at 426.470 kb on + strand at 426.470 kb on + strand at 426.471 kb on - strand at 426.471 kb on - strand at 426.471 kb on - strand at 426.471 kb on - strand at 426.471 kb on - strand at 426.471 kb on - strand at 426.471 kb on - strand at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.978 kb on + strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 426.979 kb on - strand, within MPMX19_05708 at 427.119 kb on + strand, within MPMX19_05708 at 427.119 kb on + strand, within MPMX19_05708 at 427.119 kb on + strand, within MPMX19_05708 at 427.120 kb on - strand, within MPMX19_05708
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 424,783 + MPMX19_05706 0.71 +0.4 424,783 + MPMX19_05706 0.71 -1.3 424,783 + MPMX19_05706 0.71 -2.5 424,783 + MPMX19_05706 0.71 +0.8 424,783 + MPMX19_05706 0.71 +0.2 424,783 + MPMX19_05706 0.71 -0.2 424,783 + MPMX19_05706 0.71 +0.8 424,784 - MPMX19_05706 0.72 +0.7 424,784 - MPMX19_05706 0.72 +0.4 424,784 - MPMX19_05706 0.72 -0.3 425,023 + MPMX19_05706 0.83 -0.1 425,023 + MPMX19_05706 0.83 +0.6 425,023 + MPMX19_05706 0.83 -0.0 425,023 + MPMX19_05706 0.83 -0.2 425,023 + MPMX19_05706 0.83 -0.3 425,023 + MPMX19_05706 0.83 -0.7 425,023 + MPMX19_05706 0.83 -0.7 425,023 + MPMX19_05706 0.83 -0.6 425,024 - MPMX19_05706 0.83 -1.4 425,024 - MPMX19_05706 0.83 +1.2 425,024 - MPMX19_05706 0.83 +0.4 425,290 + -1.7 425,290 + -1.1 425,290 + +0.8 425,290 + +0.0 425,290 + -1.3 425,290 + -1.8 425,290 + -1.8 425,290 + +2.0 425,290 + +0.6 425,290 + -0.7 425,290 + -1.9 425,290 + -1.9 425,290 + -0.2 425,290 + -0.5 425,291 - -0.5 425,291 - +0.4 425,291 - +0.3 425,291 - +0.5 425,291 - -1.4 425,291 - -2.2 425,291 - -0.8 425,291 - +1.4 425,291 - -0.2 425,469 + +0.5 425,469 + +0.5 425,469 + -1.2 425,469 + -1.0 425,469 + -2.1 425,470 - -0.3 425,470 - -0.6 425,470 - -0.6 425,470 - -1.5 425,739 + MPMX19_05707 0.38 -1.9 425,739 + MPMX19_05707 0.38 -1.0 425,740 - MPMX19_05707 0.38 -0.2 425,740 - MPMX19_05707 0.38 -0.6 425,740 - MPMX19_05707 0.38 -0.7 425,740 - MPMX19_05707 0.38 -0.3 425,740 - MPMX19_05707 0.38 +0.1 426,003 + MPMX19_05707 0.80 -1.6 426,003 + MPMX19_05707 0.80 -0.4 426,003 + MPMX19_05707 0.80 -1.7 426,003 + MPMX19_05707 0.80 -0.2 426,003 + MPMX19_05707 0.80 +0.1 426,003 + MPMX19_05707 0.80 -0.3 426,003 + MPMX19_05707 0.80 +0.9 426,003 + MPMX19_05707 0.80 -0.3 426,003 + MPMX19_05707 0.80 -0.3 426,003 + MPMX19_05707 0.80 -0.6 426,003 + MPMX19_05707 0.80 -2.1 426,003 + MPMX19_05707 0.80 -1.7 426,003 + MPMX19_05707 0.80 -1.4 426,003 + MPMX19_05707 0.80 -0.1 426,004 - MPMX19_05707 0.80 -0.1 426,004 - MPMX19_05707 0.80 +0.7 426,004 - MPMX19_05707 0.80 -0.6 426,004 - MPMX19_05707 0.80 -0.7 426,004 - MPMX19_05707 0.80 -2.0 426,004 - MPMX19_05707 0.80 -0.2 426,004 - MPMX19_05707 0.80 -0.2 426,004 - MPMX19_05707 0.80 -1.1 426,004 - MPMX19_05707 0.80 -0.3 426,004 - MPMX19_05707 0.80 +1.5 426,194 + +1.1 426,194 + -0.5 426,195 - -2.3 426,196 + -0.8 426,196 + -0.8 426,196 + -0.8 426,196 + -0.0 426,196 + -1.2 426,196 + +0.7 426,196 + -0.8 426,196 + -0.7 426,197 - -0.2 426,197 - -1.2 426,197 - -1.3 426,197 - -0.7 426,197 - -1.0 426,197 - -0.6 426,197 - -0.9 426,197 - -0.2 426,197 - -0.3 426,197 - -1.4 426,197 - +0.2 426,197 - +1.0 426,201 + -2.5 426,202 - -0.7 426,238 + -0.8 426,238 + +0.7 426,238 + -1.3 426,239 - -0.3 426,239 - -1.2 426,239 - +0.2 426,239 - +0.2 426,239 - -0.6 426,239 - -0.1 426,263 - -1.2 426,265 + +0.1 426,266 - -0.8 426,300 + -0.8 426,301 - -1.6 426,306 + -1.3 426,316 + +1.9 426,317 - -0.2 426,317 - -2.5 426,332 + -0.2 426,332 + -0.8 426,332 + +0.4 426,332 + -0.1 426,333 - -1.6 426,333 - -1.3 426,397 + -1.5 426,397 + -1.4 426,397 + -0.2 426,397 + +0.4 426,398 - -0.0 426,398 - -0.1 426,398 - -0.2 426,398 - -0.2 426,398 - +0.3 426,398 - -0.0 426,398 - +0.3 426,431 + +0.4 426,432 - -0.8 426,470 + -0.7 426,470 + -0.5 426,470 + -0.0 426,470 + -0.3 426,470 + -0.0 426,471 - -0.9 426,471 - -0.7 426,471 - -2.0 426,471 - -1.7 426,471 - +0.2 426,471 - -0.0 426,471 - -1.5 426,978 + MPMX19_05708 0.24 -0.5 426,978 + MPMX19_05708 0.24 -0.9 426,978 + MPMX19_05708 0.24 -0.1 426,978 + MPMX19_05708 0.24 -1.2 426,978 + MPMX19_05708 0.24 +2.0 426,978 + MPMX19_05708 0.24 +0.7 426,978 + MPMX19_05708 0.24 -0.9 426,978 + MPMX19_05708 0.24 +0.1 426,978 + MPMX19_05708 0.24 -1.0 426,978 + MPMX19_05708 0.24 -1.1 426,978 + MPMX19_05708 0.24 -0.8 426,978 + MPMX19_05708 0.24 -0.4 426,978 + MPMX19_05708 0.24 -0.5 426,978 + MPMX19_05708 0.24 -0.8 426,978 + MPMX19_05708 0.24 -0.2 426,978 + MPMX19_05708 0.24 +0.7 426,978 + MPMX19_05708 0.24 -0.2 426,978 + MPMX19_05708 0.24 -0.2 426,978 + MPMX19_05708 0.24 -0.2 426,978 + MPMX19_05708 0.24 -0.6 426,978 + MPMX19_05708 0.24 -0.0 426,978 + MPMX19_05708 0.24 +0.6 426,978 + MPMX19_05708 0.24 -0.6 426,978 + MPMX19_05708 0.24 -0.5 426,979 - MPMX19_05708 0.24 -1.2 426,979 - MPMX19_05708 0.24 +1.0 426,979 - MPMX19_05708 0.24 +0.6 426,979 - MPMX19_05708 0.24 -0.4 426,979 - MPMX19_05708 0.24 +1.0 426,979 - MPMX19_05708 0.24 -1.3 426,979 - MPMX19_05708 0.24 +0.6 426,979 - MPMX19_05708 0.24 +0.0 426,979 - MPMX19_05708 0.24 +1.0 426,979 - MPMX19_05708 0.24 +1.3 426,979 - MPMX19_05708 0.24 -0.9 426,979 - MPMX19_05708 0.24 -2.4 426,979 - MPMX19_05708 0.24 -0.7 426,979 - MPMX19_05708 0.24 +0.6 426,979 - MPMX19_05708 0.24 -0.5 426,979 - MPMX19_05708 0.24 +1.0 426,979 - MPMX19_05708 0.24 -1.7 426,979 - MPMX19_05708 0.24 +0.7 426,979 - MPMX19_05708 0.24 -1.2 426,979 - MPMX19_05708 0.24 -0.7 427,119 + MPMX19_05708 0.31 -1.3 427,119 + MPMX19_05708 0.31 +0.4 427,119 + MPMX19_05708 0.31 -0.4 427,120 - MPMX19_05708 0.31 +1.5
Or see this region's nucleotide sequence