Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05531 and MPMX19_05532 are separated by 132 nucleotides MPMX19_05532 and MPMX19_05533 are separated by 93 nucleotides MPMX19_05533 and MPMX19_05534 are separated by 118 nucleotides MPMX19_05534 and MPMX19_05535 are separated by 30 nucleotides
MPMX19_05531: MPMX19_05531 - Serine acetyltransferase, at 238,519 to 239,355
_05531
MPMX19_05532: MPMX19_05532 - hypothetical protein, at 239,488 to 240,237
_05532
MPMX19_05533: MPMX19_05533 - tRNA-Phe, at 240,331 to 240,406
_05533
MPMX19_05534: MPMX19_05534 - DNA gyrase inhibitor YacG, at 240,525 to 240,764
_05534
MPMX19_05535: MPMX19_05535 - Ribonuclease G, at 240,795 to 242,030
_05535
Position (kb) 239
240
241 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 238.642 kb on + strand, within MPMX19_05531 at 238.642 kb on + strand, within MPMX19_05531 at 238.642 kb on + strand, within MPMX19_05531 at 238.642 kb on + strand, within MPMX19_05531 at 238.642 kb on + strand, within MPMX19_05531 at 238.643 kb on - strand, within MPMX19_05531 at 238.858 kb on + strand, within MPMX19_05531 at 238.858 kb on + strand, within MPMX19_05531 at 238.858 kb on + strand, within MPMX19_05531 at 238.858 kb on + strand, within MPMX19_05531 at 238.859 kb on - strand, within MPMX19_05531 at 238.859 kb on - strand, within MPMX19_05531 at 238.859 kb on - strand, within MPMX19_05531 at 238.859 kb on - strand, within MPMX19_05531 at 238.859 kb on - strand, within MPMX19_05531 at 238.859 kb on - strand, within MPMX19_05531 at 238.859 kb on - strand, within MPMX19_05531 at 238.870 kb on + strand, within MPMX19_05531 at 238.870 kb on + strand, within MPMX19_05531 at 238.870 kb on + strand, within MPMX19_05531 at 238.871 kb on - strand, within MPMX19_05531 at 238.871 kb on - strand, within MPMX19_05531 at 238.871 kb on - strand, within MPMX19_05531 at 238.871 kb on - strand, within MPMX19_05531 at 238.871 kb on - strand, within MPMX19_05531 at 238.871 kb on - strand, within MPMX19_05531 at 239.344 kb on + strand at 239.344 kb on + strand at 239.344 kb on + strand at 239.345 kb on - strand at 239.345 kb on - strand at 239.415 kb on + strand at 239.416 kb on - strand at 239.416 kb on - strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.428 kb on + strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.429 kb on - strand at 239.430 kb on + strand at 239.430 kb on + strand at 239.430 kb on + strand at 239.430 kb on + strand at 239.430 kb on + strand at 239.430 kb on + strand at 239.430 kb on + strand at 239.430 kb on + strand at 239.430 kb on + strand at 239.430 kb on + strand at 239.430 kb on + strand at 239.431 kb on - strand at 239.431 kb on - strand at 239.431 kb on - strand at 239.431 kb on - strand at 239.431 kb on - strand at 239.431 kb on - strand at 239.503 kb on - strand at 239.653 kb on + strand, within MPMX19_05532 at 239.653 kb on + strand, within MPMX19_05532 at 239.653 kb on + strand, within MPMX19_05532 at 239.653 kb on + strand, within MPMX19_05532 at 239.654 kb on - strand, within MPMX19_05532 at 239.654 kb on - strand, within MPMX19_05532 at 239.654 kb on - strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.734 kb on + strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.735 kb on - strand, within MPMX19_05532 at 239.743 kb on + strand, within MPMX19_05532 at 239.743 kb on + strand, within MPMX19_05532 at 239.743 kb on + strand, within MPMX19_05532 at 239.743 kb on + strand, within MPMX19_05532 at 239.743 kb on + strand, within MPMX19_05532 at 239.743 kb on + strand, within MPMX19_05532 at 239.743 kb on + strand, within MPMX19_05532 at 239.743 kb on + strand, within MPMX19_05532 at 239.743 kb on + strand, within MPMX19_05532 at 239.743 kb on + strand, within MPMX19_05532 at 239.743 kb on + strand, within MPMX19_05532 at 239.743 kb on + strand, within MPMX19_05532 at 239.744 kb on - strand, within MPMX19_05532 at 239.744 kb on - strand, within MPMX19_05532 at 239.744 kb on - strand, within MPMX19_05532 at 239.744 kb on - strand, within MPMX19_05532 at 239.744 kb on - strand, within MPMX19_05532 at 239.744 kb on - strand, within MPMX19_05532 at 239.744 kb on - strand, within MPMX19_05532 at 239.744 kb on - strand, within MPMX19_05532 at 239.744 kb on - strand, within MPMX19_05532 at 239.744 kb on - strand, within MPMX19_05532 at 239.914 kb on + strand, within MPMX19_05532 at 239.914 kb on + strand, within MPMX19_05532 at 239.914 kb on + strand, within MPMX19_05532 at 239.926 kb on + strand, within MPMX19_05532 at 239.926 kb on + strand, within MPMX19_05532 at 240.031 kb on + strand, within MPMX19_05532 at 240.031 kb on + strand, within MPMX19_05532 at 240.031 kb on + strand, within MPMX19_05532 at 240.031 kb on + strand, within MPMX19_05532 at 240.031 kb on + strand, within MPMX19_05532 at 240.031 kb on + strand, within MPMX19_05532 at 240.031 kb on + strand, within MPMX19_05532 at 240.031 kb on + strand, within MPMX19_05532 at 240.031 kb on + strand, within MPMX19_05532 at 240.031 kb on + strand, within MPMX19_05532 at 240.031 kb on + strand, within MPMX19_05532 at 240.031 kb on + strand, within MPMX19_05532 at 240.032 kb on - strand, within MPMX19_05532 at 240.138 kb on + strand, within MPMX19_05532 at 240.138 kb on + strand, within MPMX19_05532 at 240.139 kb on - strand, within MPMX19_05532 at 240.241 kb on + strand at 240.589 kb on + strand, within MPMX19_05534 at 240.589 kb on + strand, within MPMX19_05534 at 240.590 kb on - strand, within MPMX19_05534 at 240.590 kb on - strand, within MPMX19_05534 at 240.778 kb on + strand at 240.788 kb on + strand at 240.788 kb on + strand at 240.788 kb on + strand at 240.788 kb on + strand at 240.788 kb on + strand at 240.788 kb on + strand at 240.788 kb on + strand at 240.788 kb on + strand at 240.788 kb on + strand at 240.789 kb on - strand at 240.789 kb on - strand at 240.789 kb on - strand at 240.789 kb on - strand at 240.789 kb on - strand at 240.789 kb on - strand at 240.789 kb on - strand at 240.789 kb on - strand at 240.789 kb on - strand at 240.789 kb on - strand at 240.789 kb on - strand at 240.789 kb on - strand at 240.789 kb on - strand at 240.874 kb on + strand at 240.874 kb on + strand at 240.874 kb on + strand at 240.874 kb on + strand at 240.874 kb on + strand at 240.874 kb on + strand at 240.874 kb on + strand at 240.874 kb on + strand at 240.874 kb on + strand at 240.874 kb on + strand at 240.874 kb on + strand at 240.874 kb on + strand at 240.875 kb on - strand at 240.875 kb on - strand at 240.875 kb on - strand at 240.875 kb on - strand at 240.875 kb on - strand at 240.875 kb on - strand at 240.875 kb on - strand at 240.875 kb on - strand at 240.875 kb on - strand at 240.875 kb on - strand at 240.875 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 238,642 + MPMX19_05531 0.15 -0.6 238,642 + MPMX19_05531 0.15 -0.9 238,642 + MPMX19_05531 0.15 +0.4 238,642 + MPMX19_05531 0.15 +0.8 238,642 + MPMX19_05531 0.15 +0.0 238,643 - MPMX19_05531 0.15 -1.2 238,858 + MPMX19_05531 0.41 -1.7 238,858 + MPMX19_05531 0.41 -0.8 238,858 + MPMX19_05531 0.41 -1.3 238,858 + MPMX19_05531 0.41 -2.2 238,859 - MPMX19_05531 0.41 +0.9 238,859 - MPMX19_05531 0.41 -0.2 238,859 - MPMX19_05531 0.41 -0.9 238,859 - MPMX19_05531 0.41 +1.6 238,859 - MPMX19_05531 0.41 +0.3 238,859 - MPMX19_05531 0.41 +0.3 238,859 - MPMX19_05531 0.41 -1.9 238,870 + MPMX19_05531 0.42 -1.0 238,870 + MPMX19_05531 0.42 +0.6 238,870 + MPMX19_05531 0.42 -1.2 238,871 - MPMX19_05531 0.42 +0.0 238,871 - MPMX19_05531 0.42 -0.5 238,871 - MPMX19_05531 0.42 -0.4 238,871 - MPMX19_05531 0.42 -1.2 238,871 - MPMX19_05531 0.42 +0.7 238,871 - MPMX19_05531 0.42 -0.1 239,344 + -1.0 239,344 + -0.5 239,344 + -0.3 239,345 - -0.8 239,345 - -1.0 239,415 + -1.8 239,416 - +0.3 239,416 - -0.3 239,428 + +0.0 239,428 + -0.3 239,428 + -0.7 239,428 + -0.5 239,428 + +2.0 239,428 + -0.4 239,428 + -0.3 239,428 + -0.6 239,428 + -0.3 239,428 + -0.6 239,428 + -0.4 239,428 + -1.7 239,428 + +0.0 239,428 + -2.0 239,428 + -0.3 239,428 + -0.4 239,428 + +0.6 239,428 + -0.3 239,428 + -0.3 239,428 + +0.5 239,428 + +0.7 239,428 + -1.9 239,428 + -0.1 239,428 + -1.3 239,428 + -0.7 239,428 + -0.8 239,428 + -0.6 239,428 + -0.8 239,428 + -1.2 239,428 + -1.7 239,429 - +0.4 239,429 - -0.2 239,429 - -2.6 239,429 - +0.1 239,429 - -1.3 239,429 - -0.2 239,429 - -0.1 239,429 - -2.3 239,429 - -0.9 239,429 - -1.0 239,429 - -1.0 239,429 - -0.3 239,429 - -0.8 239,429 - -0.4 239,429 - +0.1 239,429 - +0.5 239,429 - +0.4 239,429 - -1.0 239,429 - -0.8 239,429 - -0.7 239,429 - -0.8 239,429 - +1.0 239,429 - +0.0 239,429 - -1.3 239,429 - -2.9 239,429 - +0.0 239,429 - -1.3 239,429 - -0.8 239,429 - -0.2 239,430 + +0.3 239,430 + +0.2 239,430 + -1.0 239,430 + -1.6 239,430 + +1.0 239,430 + -0.6 239,430 + -0.3 239,430 + +1.3 239,430 + +0.4 239,430 + +1.0 239,430 + +0.0 239,431 - -0.5 239,431 - -0.6 239,431 - -0.8 239,431 - -0.7 239,431 - -0.5 239,431 - +1.1 239,503 - -0.6 239,653 + MPMX19_05532 0.22 +0.1 239,653 + MPMX19_05532 0.22 -1.4 239,653 + MPMX19_05532 0.22 -0.3 239,653 + MPMX19_05532 0.22 +0.4 239,654 - MPMX19_05532 0.22 -0.3 239,654 - MPMX19_05532 0.22 -0.3 239,654 - MPMX19_05532 0.22 +0.2 239,734 + MPMX19_05532 0.33 +0.6 239,734 + MPMX19_05532 0.33 -0.7 239,734 + MPMX19_05532 0.33 +0.1 239,734 + MPMX19_05532 0.33 +1.6 239,734 + MPMX19_05532 0.33 +0.5 239,734 + MPMX19_05532 0.33 -0.7 239,734 + MPMX19_05532 0.33 -1.2 239,734 + MPMX19_05532 0.33 -2.5 239,734 + MPMX19_05532 0.33 -0.3 239,734 + MPMX19_05532 0.33 -0.6 239,734 + MPMX19_05532 0.33 -0.4 239,734 + MPMX19_05532 0.33 +0.4 239,734 + MPMX19_05532 0.33 +0.0 239,734 + MPMX19_05532 0.33 -0.8 239,734 + MPMX19_05532 0.33 +0.1 239,734 + MPMX19_05532 0.33 +0.8 239,734 + MPMX19_05532 0.33 -1.0 239,734 + MPMX19_05532 0.33 -0.7 239,734 + MPMX19_05532 0.33 +0.2 239,734 + MPMX19_05532 0.33 -0.2 239,734 + MPMX19_05532 0.33 -0.8 239,734 + MPMX19_05532 0.33 -0.4 239,734 + MPMX19_05532 0.33 -0.5 239,734 + MPMX19_05532 0.33 -0.2 239,734 + MPMX19_05532 0.33 -1.3 239,734 + MPMX19_05532 0.33 -0.2 239,734 + MPMX19_05532 0.33 -3.0 239,735 - MPMX19_05532 0.33 +0.7 239,735 - MPMX19_05532 0.33 -1.3 239,735 - MPMX19_05532 0.33 -0.2 239,735 - MPMX19_05532 0.33 -2.1 239,735 - MPMX19_05532 0.33 +0.2 239,735 - MPMX19_05532 0.33 +0.1 239,735 - MPMX19_05532 0.33 -0.2 239,735 - MPMX19_05532 0.33 -1.0 239,735 - MPMX19_05532 0.33 -0.1 239,735 - MPMX19_05532 0.33 -0.2 239,735 - MPMX19_05532 0.33 -0.4 239,735 - MPMX19_05532 0.33 +0.3 239,735 - MPMX19_05532 0.33 +2.3 239,735 - MPMX19_05532 0.33 +1.7 239,735 - MPMX19_05532 0.33 +0.6 239,735 - MPMX19_05532 0.33 +1.0 239,735 - MPMX19_05532 0.33 -0.2 239,735 - MPMX19_05532 0.33 -0.6 239,735 - MPMX19_05532 0.33 -0.8 239,735 - MPMX19_05532 0.33 -1.0 239,743 + MPMX19_05532 0.34 +0.2 239,743 + MPMX19_05532 0.34 -0.2 239,743 + MPMX19_05532 0.34 -0.2 239,743 + MPMX19_05532 0.34 -0.2 239,743 + MPMX19_05532 0.34 -0.1 239,743 + MPMX19_05532 0.34 -0.3 239,743 + MPMX19_05532 0.34 +2.3 239,743 + MPMX19_05532 0.34 -1.9 239,743 + MPMX19_05532 0.34 -0.3 239,743 + MPMX19_05532 0.34 -0.7 239,743 + MPMX19_05532 0.34 -0.7 239,743 + MPMX19_05532 0.34 -0.5 239,744 - MPMX19_05532 0.34 -0.1 239,744 - MPMX19_05532 0.34 -0.6 239,744 - MPMX19_05532 0.34 +0.8 239,744 - MPMX19_05532 0.34 -0.4 239,744 - MPMX19_05532 0.34 +0.4 239,744 - MPMX19_05532 0.34 -0.3 239,744 - MPMX19_05532 0.34 -0.2 239,744 - MPMX19_05532 0.34 +0.1 239,744 - MPMX19_05532 0.34 -0.3 239,744 - MPMX19_05532 0.34 -2.1 239,914 + MPMX19_05532 0.57 +0.0 239,914 + MPMX19_05532 0.57 -0.0 239,914 + MPMX19_05532 0.57 +0.8 239,926 + MPMX19_05532 0.58 -0.3 239,926 + MPMX19_05532 0.58 -0.3 240,031 + MPMX19_05532 0.72 -1.2 240,031 + MPMX19_05532 0.72 +0.0 240,031 + MPMX19_05532 0.72 -0.3 240,031 + MPMX19_05532 0.72 -0.6 240,031 + MPMX19_05532 0.72 +0.6 240,031 + MPMX19_05532 0.72 -0.3 240,031 + MPMX19_05532 0.72 +0.0 240,031 + MPMX19_05532 0.72 +0.1 240,031 + MPMX19_05532 0.72 +0.2 240,031 + MPMX19_05532 0.72 -1.2 240,031 + MPMX19_05532 0.72 -0.7 240,031 + MPMX19_05532 0.72 +1.5 240,032 - MPMX19_05532 0.73 -1.8 240,138 + MPMX19_05532 0.87 +0.8 240,138 + MPMX19_05532 0.87 -2.4 240,139 - MPMX19_05532 0.87 -0.3 240,241 + -1.0 240,589 + MPMX19_05534 0.27 -0.2 240,589 + MPMX19_05534 0.27 +0.6 240,590 - MPMX19_05534 0.27 -0.3 240,590 - MPMX19_05534 0.27 -0.8 240,778 + +0.0 240,788 + -1.2 240,788 + +0.2 240,788 + +0.6 240,788 + -0.8 240,788 + -0.3 240,788 + +1.4 240,788 + -0.8 240,788 + -0.7 240,788 + +0.8 240,789 - -0.3 240,789 - +0.0 240,789 - -2.0 240,789 - +0.5 240,789 - -1.2 240,789 - -1.2 240,789 - -0.3 240,789 - +0.3 240,789 - -0.8 240,789 - -0.2 240,789 - -0.2 240,789 - +0.7 240,789 - -1.2 240,874 + -0.5 240,874 + -1.2 240,874 + -0.3 240,874 + -0.6 240,874 + -1.0 240,874 + -1.7 240,874 + +0.4 240,874 + -1.0 240,874 + -1.3 240,874 + +0.4 240,874 + +0.2 240,874 + +0.0 240,875 - -1.4 240,875 - -0.1 240,875 - +1.4 240,875 - +0.2 240,875 - -0.3 240,875 - +1.5 240,875 - +0.4 240,875 - -1.0 240,875 - -0.7 240,875 - +0.6 240,875 - -0.2
Or see this region's nucleotide sequence