Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05469 and MPMX19_05470 are separated by 260 nucleotides MPMX19_05470 and MPMX19_05471 are separated by 21 nucleotides MPMX19_05471 and MPMX19_05472 are separated by 88 nucleotides
MPMX19_05469: MPMX19_05469 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 167,151 to 167,939
_05469
MPMX19_05470: MPMX19_05470 - hypothetical protein, at 168,200 to 170,269
_05470
MPMX19_05471: MPMX19_05471 - Thioredoxin 2, at 170,291 to 170,791
_05471
MPMX19_05472: MPMX19_05472 - hypothetical protein, at 170,880 to 171,134
_05472
Position (kb) 168
169
170
171 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 167.210 kb on + strand at 167.210 kb on + strand at 167.211 kb on - strand at 167.649 kb on + strand, within MPMX19_05469 at 167.649 kb on + strand, within MPMX19_05469 at 167.650 kb on - strand, within MPMX19_05469 at 167.650 kb on - strand, within MPMX19_05469 at 167.650 kb on - strand, within MPMX19_05469 at 167.650 kb on - strand, within MPMX19_05469 at 167.650 kb on - strand, within MPMX19_05469 at 167.650 kb on - strand, within MPMX19_05469 at 167.772 kb on + strand, within MPMX19_05469 at 167.772 kb on + strand, within MPMX19_05469 at 167.772 kb on + strand, within MPMX19_05469 at 167.773 kb on - strand, within MPMX19_05469 at 167.773 kb on - strand, within MPMX19_05469 at 167.856 kb on + strand, within MPMX19_05469 at 167.856 kb on + strand, within MPMX19_05469 at 167.856 kb on + strand, within MPMX19_05469 at 167.856 kb on + strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.857 kb on - strand, within MPMX19_05469 at 167.890 kb on - strand at 167.890 kb on - strand at 167.908 kb on + strand at 168.105 kb on + strand at 168.106 kb on - strand at 168.106 kb on - strand at 168.110 kb on + strand at 168.110 kb on + strand at 168.110 kb on + strand at 168.110 kb on + strand at 168.110 kb on + strand at 168.111 kb on - strand at 168.111 kb on - strand at 168.111 kb on - strand at 168.293 kb on + strand at 168.293 kb on + strand at 168.293 kb on + strand at 168.293 kb on + strand at 168.294 kb on - strand at 168.294 kb on - strand at 168.294 kb on - strand at 168.294 kb on - strand at 168.294 kb on - strand at 168.294 kb on - strand at 168.386 kb on + strand at 168.968 kb on + strand, within MPMX19_05470 at 168.968 kb on + strand, within MPMX19_05470 at 168.968 kb on + strand, within MPMX19_05470 at 168.968 kb on + strand, within MPMX19_05470 at 168.968 kb on + strand, within MPMX19_05470 at 168.968 kb on + strand, within MPMX19_05470 at 168.969 kb on - strand, within MPMX19_05470 at 168.969 kb on - strand, within MPMX19_05470 at 168.969 kb on - strand, within MPMX19_05470 at 168.969 kb on - strand, within MPMX19_05470 at 168.969 kb on - strand, within MPMX19_05470 at 170.267 kb on + strand at 170.293 kb on - strand at 170.566 kb on + strand, within MPMX19_05471 at 170.567 kb on - strand, within MPMX19_05471 at 170.832 kb on + strand at 170.832 kb on + strand at 170.832 kb on + strand at 170.832 kb on + strand at 170.832 kb on + strand at 170.832 kb on + strand at 170.832 kb on + strand at 170.832 kb on + strand at 170.832 kb on + strand at 170.832 kb on + strand at 170.832 kb on + strand at 170.832 kb on + strand at 170.833 kb on - strand at 170.833 kb on - strand at 170.833 kb on - strand at 170.833 kb on - strand at 170.833 kb on - strand at 170.833 kb on - strand at 170.833 kb on - strand at 170.833 kb on - strand at 170.833 kb on - strand at 170.881 kb on + strand at 170.882 kb on - strand at 170.882 kb on - strand at 170.926 kb on + strand, within MPMX19_05472 at 170.926 kb on + strand, within MPMX19_05472 at 170.926 kb on + strand, within MPMX19_05472 at 170.926 kb on + strand, within MPMX19_05472 at 170.926 kb on + strand, within MPMX19_05472 at 170.926 kb on + strand, within MPMX19_05472 at 170.927 kb on - strand, within MPMX19_05472 at 170.927 kb on - strand, within MPMX19_05472 at 170.927 kb on - strand, within MPMX19_05472 at 170.927 kb on - strand, within MPMX19_05472 at 170.927 kb on - strand, within MPMX19_05472 at 170.927 kb on - strand, within MPMX19_05472 at 170.927 kb on - strand, within MPMX19_05472 at 170.995 kb on + strand, within MPMX19_05472 at 170.995 kb on + strand, within MPMX19_05472 at 170.996 kb on - strand, within MPMX19_05472 at 171.052 kb on + strand, within MPMX19_05472 at 171.195 kb on + strand at 171.196 kb on - strand at 171.223 kb on - strand at 171.238 kb on + strand at 171.238 kb on + strand at 171.238 kb on + strand at 171.238 kb on + strand at 171.239 kb on - strand at 171.239 kb on - strand at 171.239 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 167,210 + -0.3 167,210 + -1.2 167,211 - -0.7 167,649 + MPMX19_05469 0.63 -1.3 167,649 + MPMX19_05469 0.63 -1.6 167,650 - MPMX19_05469 0.63 -2.0 167,650 - MPMX19_05469 0.63 +0.1 167,650 - MPMX19_05469 0.63 +0.3 167,650 - MPMX19_05469 0.63 +1.0 167,650 - MPMX19_05469 0.63 -0.9 167,650 - MPMX19_05469 0.63 -0.6 167,772 + MPMX19_05469 0.79 +0.4 167,772 + MPMX19_05469 0.79 -0.1 167,772 + MPMX19_05469 0.79 -2.3 167,773 - MPMX19_05469 0.79 -0.2 167,773 - MPMX19_05469 0.79 +1.8 167,856 + MPMX19_05469 0.89 +1.1 167,856 + MPMX19_05469 0.89 -1.6 167,856 + MPMX19_05469 0.89 +0.9 167,856 + MPMX19_05469 0.89 +1.2 167,857 - MPMX19_05469 0.89 +0.6 167,857 - MPMX19_05469 0.89 -0.6 167,857 - MPMX19_05469 0.89 -0.4 167,857 - MPMX19_05469 0.89 +1.3 167,857 - MPMX19_05469 0.89 +0.1 167,857 - MPMX19_05469 0.89 -0.6 167,857 - MPMX19_05469 0.89 -1.3 167,890 - +0.7 167,890 - +0.4 167,908 + +0.5 168,105 + +1.4 168,106 - -1.8 168,106 - -1.3 168,110 + -1.0 168,110 + -1.0 168,110 + -0.6 168,110 + -1.6 168,110 + +1.2 168,111 - +1.8 168,111 - -0.9 168,111 - +2.0 168,293 + +0.2 168,293 + -1.1 168,293 + +0.4 168,293 + -2.0 168,294 - -1.6 168,294 - -1.3 168,294 - -0.9 168,294 - +0.2 168,294 - -0.3 168,294 - -3.4 168,386 + -1.2 168,968 + MPMX19_05470 0.37 +0.6 168,968 + MPMX19_05470 0.37 -0.8 168,968 + MPMX19_05470 0.37 +0.8 168,968 + MPMX19_05470 0.37 +0.4 168,968 + MPMX19_05470 0.37 +0.2 168,968 + MPMX19_05470 0.37 -0.5 168,969 - MPMX19_05470 0.37 -0.8 168,969 - MPMX19_05470 0.37 +1.0 168,969 - MPMX19_05470 0.37 -0.4 168,969 - MPMX19_05470 0.37 +1.8 168,969 - MPMX19_05470 0.37 -0.7 170,267 + +0.3 170,293 - +0.0 170,566 + MPMX19_05471 0.55 +0.8 170,567 - MPMX19_05471 0.55 +0.3 170,832 + -0.6 170,832 + -0.1 170,832 + +0.4 170,832 + -0.8 170,832 + -0.7 170,832 + -0.7 170,832 + -0.9 170,832 + -0.4 170,832 + +0.6 170,832 + +0.0 170,832 + -0.6 170,832 + -1.7 170,833 - +0.8 170,833 - -1.2 170,833 - -2.2 170,833 - -2.4 170,833 - -1.7 170,833 - -0.1 170,833 - +0.7 170,833 - +0.5 170,833 - -0.2 170,881 + -0.9 170,882 - -0.6 170,882 - -0.9 170,926 + MPMX19_05472 0.18 +0.2 170,926 + MPMX19_05472 0.18 -2.1 170,926 + MPMX19_05472 0.18 -1.6 170,926 + MPMX19_05472 0.18 +0.7 170,926 + MPMX19_05472 0.18 -0.8 170,926 + MPMX19_05472 0.18 -0.8 170,927 - MPMX19_05472 0.18 +0.4 170,927 - MPMX19_05472 0.18 -0.3 170,927 - MPMX19_05472 0.18 -1.2 170,927 - MPMX19_05472 0.18 -0.9 170,927 - MPMX19_05472 0.18 -0.8 170,927 - MPMX19_05472 0.18 -0.8 170,927 - MPMX19_05472 0.18 -1.2 170,995 + MPMX19_05472 0.45 -1.4 170,995 + MPMX19_05472 0.45 +1.0 170,996 - MPMX19_05472 0.45 -0.8 171,052 + MPMX19_05472 0.67 +1.4 171,195 + -0.8 171,196 - -0.7 171,223 - +0.0 171,238 + -0.4 171,238 + -1.4 171,238 + -0.6 171,238 + -1.4 171,239 - +0.2 171,239 - -0.2 171,239 - -0.3
Or see this region's nucleotide sequence