Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05061 and MPMX19_05062 are separated by 336 nucleotides MPMX19_05062 and MPMX19_05063 are separated by 145 nucleotides MPMX19_05063 and MPMX19_05064 are separated by 174 nucleotides MPMX19_05064 and MPMX19_05065 are separated by 1 nucleotides
MPMX19_05061: MPMX19_05061 - hypothetical protein, at 544,886 to 545,275
_05061
MPMX19_05062: MPMX19_05062 - Sulfur carrier protein TusA, at 545,612 to 545,839
_05062
MPMX19_05063: MPMX19_05063 - Histone deacetylase-like amidohydrolase, at 545,985 to 546,974
_05063
MPMX19_05064: MPMX19_05064 - Exodeoxyribonuclease 7 small subunit, at 547,149 to 547,427
_05064
MPMX19_05065: MPMX19_05065 - Farnesyl diphosphate synthase, at 547,429 to 548,331
_05065
Position (kb) 545
546
547 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 544.992 kb on + strand, within MPMX19_05061 at 544.992 kb on + strand, within MPMX19_05061 at 544.993 kb on - strand, within MPMX19_05061 at 544.993 kb on - strand, within MPMX19_05061 at 544.993 kb on - strand, within MPMX19_05061 at 544.993 kb on - strand, within MPMX19_05061 at 544.993 kb on - strand, within MPMX19_05061 at 545.046 kb on + strand, within MPMX19_05061 at 545.046 kb on + strand, within MPMX19_05061 at 545.047 kb on - strand, within MPMX19_05061 at 545.047 kb on - strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.049 kb on + strand, within MPMX19_05061 at 545.050 kb on - strand, within MPMX19_05061 at 545.050 kb on - strand, within MPMX19_05061 at 545.050 kb on - strand, within MPMX19_05061 at 545.050 kb on - strand, within MPMX19_05061 at 545.050 kb on - strand, within MPMX19_05061 at 545.050 kb on - strand, within MPMX19_05061 at 545.050 kb on - strand, within MPMX19_05061 at 545.050 kb on - strand, within MPMX19_05061 at 545.050 kb on - strand, within MPMX19_05061 at 545.050 kb on - strand, within MPMX19_05061 at 545.281 kb on + strand at 545.281 kb on + strand at 545.356 kb on + strand at 545.356 kb on + strand at 545.356 kb on + strand at 545.361 kb on + strand at 545.361 kb on + strand at 545.364 kb on + strand at 545.365 kb on - strand at 545.366 kb on + strand at 545.367 kb on - strand at 545.367 kb on - strand at 545.373 kb on - strand at 545.439 kb on + strand at 545.440 kb on - strand at 545.440 kb on - strand at 545.511 kb on + strand at 545.511 kb on + strand at 545.512 kb on - strand at 545.599 kb on + strand at 545.632 kb on + strand at 545.632 kb on + strand at 545.632 kb on + strand at 545.633 kb on - strand at 545.633 kb on - strand at 545.633 kb on - strand at 545.633 kb on - strand at 545.704 kb on + strand, within MPMX19_05062 at 545.884 kb on - strand at 545.884 kb on - strand at 545.884 kb on - strand at 545.960 kb on + strand at 545.960 kb on + strand at 545.960 kb on + strand at 545.960 kb on + strand at 545.961 kb on - strand at 545.961 kb on - strand at 545.970 kb on - strand at 545.970 kb on - strand at 545.970 kb on - strand at 546.029 kb on - strand at 546.029 kb on - strand at 546.062 kb on + strand at 546.585 kb on + strand, within MPMX19_05063 at 546.585 kb on + strand, within MPMX19_05063 at 546.585 kb on + strand, within MPMX19_05063 at 546.585 kb on + strand, within MPMX19_05063 at 546.585 kb on + strand, within MPMX19_05063 at 546.585 kb on + strand, within MPMX19_05063 at 546.585 kb on + strand, within MPMX19_05063 at 546.585 kb on + strand, within MPMX19_05063 at 546.585 kb on + strand, within MPMX19_05063 at 546.585 kb on + strand, within MPMX19_05063 at 546.585 kb on + strand, within MPMX19_05063 at 546.585 kb on - strand, within MPMX19_05063 at 546.586 kb on - strand, within MPMX19_05063 at 546.586 kb on - strand, within MPMX19_05063 at 546.586 kb on - strand, within MPMX19_05063 at 546.586 kb on - strand, within MPMX19_05063 at 546.586 kb on - strand, within MPMX19_05063 at 546.586 kb on - strand, within MPMX19_05063 at 546.586 kb on - strand, within MPMX19_05063 at 546.586 kb on - strand, within MPMX19_05063 at 546.612 kb on + strand, within MPMX19_05063 at 546.612 kb on + strand, within MPMX19_05063 at 546.613 kb on - strand, within MPMX19_05063 at 546.613 kb on - strand, within MPMX19_05063 at 546.649 kb on - strand, within MPMX19_05063 at 546.912 kb on + strand at 546.912 kb on + strand at 546.912 kb on + strand at 546.912 kb on + strand at 546.912 kb on + strand at 546.913 kb on - strand at 546.913 kb on - strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.966 kb on + strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 546.967 kb on - strand at 547.022 kb on - strand at 547.039 kb on + strand at 547.039 kb on + strand at 547.039 kb on + strand at 547.040 kb on - strand at 547.040 kb on - strand at 547.040 kb on - strand at 547.061 kb on + strand at 547.061 kb on + strand at 547.061 kb on + strand at 547.061 kb on + strand at 547.061 kb on + strand at 547.061 kb on + strand at 547.061 kb on + strand at 547.061 kb on + strand at 547.061 kb on + strand at 547.061 kb on + strand at 547.061 kb on + strand at 547.061 kb on + strand at 547.062 kb on - strand at 547.062 kb on - strand at 547.062 kb on - strand at 547.062 kb on - strand at 547.062 kb on - strand at 547.062 kb on - strand at 547.062 kb on - strand at 547.062 kb on - strand at 547.062 kb on - strand at 547.122 kb on + strand at 547.122 kb on + strand at 547.122 kb on + strand at 547.122 kb on + strand at 547.122 kb on + strand at 547.122 kb on + strand at 547.122 kb on + strand at 547.122 kb on + strand at 547.122 kb on + strand at 547.122 kb on + strand at 547.302 kb on + strand, within MPMX19_05064 at 547.302 kb on + strand, within MPMX19_05064 at 547.381 kb on + strand, within MPMX19_05064 at 547.381 kb on + strand, within MPMX19_05064 at 547.434 kb on + strand at 547.434 kb on + strand at 547.681 kb on + strand, within MPMX19_05065 at 547.681 kb on + strand, within MPMX19_05065 at 547.681 kb on + strand, within MPMX19_05065 at 547.681 kb on + strand, within MPMX19_05065 at 547.681 kb on + strand, within MPMX19_05065
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 544,992 + MPMX19_05061 0.27 -0.6 544,992 + MPMX19_05061 0.27 -0.1 544,993 - MPMX19_05061 0.27 -0.6 544,993 - MPMX19_05061 0.27 -1.4 544,993 - MPMX19_05061 0.27 +1.7 544,993 - MPMX19_05061 0.27 -0.1 544,993 - MPMX19_05061 0.27 -0.9 545,046 + MPMX19_05061 0.41 +0.5 545,046 + MPMX19_05061 0.41 +0.0 545,047 - MPMX19_05061 0.41 -0.3 545,047 - MPMX19_05061 0.41 -1.1 545,049 + MPMX19_05061 0.42 +0.5 545,049 + MPMX19_05061 0.42 -0.8 545,049 + MPMX19_05061 0.42 +1.1 545,049 + MPMX19_05061 0.42 -0.9 545,049 + MPMX19_05061 0.42 -1.1 545,049 + MPMX19_05061 0.42 +0.1 545,049 + MPMX19_05061 0.42 +2.6 545,049 + MPMX19_05061 0.42 -1.4 545,049 + MPMX19_05061 0.42 +0.5 545,049 + MPMX19_05061 0.42 -1.5 545,049 + MPMX19_05061 0.42 -0.2 545,049 + MPMX19_05061 0.42 -0.9 545,049 + MPMX19_05061 0.42 -0.3 545,049 + MPMX19_05061 0.42 +0.3 545,049 + MPMX19_05061 0.42 -0.6 545,049 + MPMX19_05061 0.42 -1.0 545,049 + MPMX19_05061 0.42 -0.4 545,049 + MPMX19_05061 0.42 -0.1 545,050 - MPMX19_05061 0.42 -0.5 545,050 - MPMX19_05061 0.42 -0.3 545,050 - MPMX19_05061 0.42 -1.7 545,050 - MPMX19_05061 0.42 -0.9 545,050 - MPMX19_05061 0.42 -0.9 545,050 - MPMX19_05061 0.42 -0.4 545,050 - MPMX19_05061 0.42 -0.2 545,050 - MPMX19_05061 0.42 +0.2 545,050 - MPMX19_05061 0.42 -0.1 545,050 - MPMX19_05061 0.42 +0.2 545,281 + -0.3 545,281 + -0.9 545,356 + +0.3 545,356 + +0.3 545,356 + -0.8 545,361 + -1.2 545,361 + -1.5 545,364 + +0.3 545,365 - -1.6 545,366 + -0.1 545,367 - -0.8 545,367 - -0.2 545,373 - -1.8 545,439 + -0.1 545,440 - -0.9 545,440 - +1.5 545,511 + +1.3 545,511 + -0.2 545,512 - -0.8 545,599 + +0.9 545,632 + +0.1 545,632 + -0.4 545,632 + -0.9 545,633 - +0.0 545,633 - +1.1 545,633 - +0.6 545,633 - -0.0 545,704 + MPMX19_05062 0.40 -0.2 545,884 - -2.3 545,884 - -0.4 545,884 - +1.2 545,960 + -0.2 545,960 + +0.3 545,960 + -1.6 545,960 + -0.9 545,961 - -0.3 545,961 - +1.3 545,970 - +0.0 545,970 - -0.8 545,970 - -0.5 546,029 - +3.1 546,029 - +0.6 546,062 + -0.4 546,585 + MPMX19_05063 0.61 -0.6 546,585 + MPMX19_05063 0.61 +0.3 546,585 + MPMX19_05063 0.61 -0.7 546,585 + MPMX19_05063 0.61 -0.7 546,585 + MPMX19_05063 0.61 +0.7 546,585 + MPMX19_05063 0.61 -0.7 546,585 + MPMX19_05063 0.61 -0.8 546,585 + MPMX19_05063 0.61 +0.6 546,585 + MPMX19_05063 0.61 -0.4 546,585 + MPMX19_05063 0.61 +0.6 546,585 + MPMX19_05063 0.61 +0.9 546,585 - MPMX19_05063 0.61 -0.1 546,586 - MPMX19_05063 0.61 -0.5 546,586 - MPMX19_05063 0.61 -0.6 546,586 - MPMX19_05063 0.61 +0.5 546,586 - MPMX19_05063 0.61 +1.3 546,586 - MPMX19_05063 0.61 +1.3 546,586 - MPMX19_05063 0.61 -0.1 546,586 - MPMX19_05063 0.61 -0.1 546,586 - MPMX19_05063 0.61 -0.7 546,612 + MPMX19_05063 0.63 -0.9 546,612 + MPMX19_05063 0.63 +0.1 546,613 - MPMX19_05063 0.63 -0.2 546,613 - MPMX19_05063 0.63 -0.7 546,649 - MPMX19_05063 0.67 -0.7 546,912 + -0.1 546,912 + +0.2 546,912 + -0.2 546,912 + -0.8 546,912 + -1.7 546,913 - -0.7 546,913 - -0.7 546,966 + -0.7 546,966 + -2.0 546,966 + +0.8 546,966 + -2.1 546,966 + -0.8 546,966 + -0.3 546,966 + +0.0 546,966 + +1.1 546,966 + -1.2 546,966 + -0.6 546,966 + -1.2 546,966 + +0.8 546,966 + +1.1 546,966 + +0.2 546,966 + -1.1 546,966 + -1.1 546,966 + +1.5 546,966 + -0.9 546,966 + +1.3 546,966 + +0.1 546,966 + +0.1 546,966 + -1.6 546,966 + -0.7 546,967 - -1.2 546,967 - +0.9 546,967 - +0.5 546,967 - -1.2 546,967 - -0.7 546,967 - +0.6 546,967 - -1.7 546,967 - -0.7 546,967 - +0.3 546,967 - -0.5 546,967 - -0.2 546,967 - -1.7 546,967 - -2.0 546,967 - -2.2 546,967 - -1.0 546,967 - -0.4 546,967 - -2.0 546,967 - -0.9 546,967 - -0.8 546,967 - +0.1 546,967 - -1.7 546,967 - -1.2 546,967 - -1.0 546,967 - -2.0 546,967 - -0.5 546,967 - -1.3 546,967 - -1.1 546,967 - +1.3 547,022 - -0.8 547,039 + -1.5 547,039 + +0.8 547,039 + -0.1 547,040 - +0.9 547,040 - -0.9 547,040 - -1.7 547,061 + -1.4 547,061 + -0.7 547,061 + +0.6 547,061 + +0.3 547,061 + -1.1 547,061 + -2.2 547,061 + -1.7 547,061 + -0.9 547,061 + -0.7 547,061 + -0.5 547,061 + +0.9 547,061 + -0.7 547,062 - -2.5 547,062 - +2.5 547,062 - -0.1 547,062 - -1.7 547,062 - -1.4 547,062 - +0.6 547,062 - -0.3 547,062 - -0.2 547,062 - +1.3 547,122 + -2.0 547,122 + -2.5 547,122 + -0.4 547,122 + +0.3 547,122 + -1.0 547,122 + -0.2 547,122 + +0.8 547,122 + -0.4 547,122 + +0.0 547,122 + -0.3 547,302 + MPMX19_05064 0.55 -0.1 547,302 + MPMX19_05064 0.55 +0.9 547,381 + MPMX19_05064 0.83 +1.9 547,381 + MPMX19_05064 0.83 -1.4 547,434 + +1.0 547,434 + +0.9 547,681 + MPMX19_05065 0.28 -1.8 547,681 + MPMX19_05065 0.28 -1.5 547,681 + MPMX19_05065 0.28 -0.7 547,681 + MPMX19_05065 0.28 -1.1 547,681 + MPMX19_05065 0.28 +0.3
Or see this region's nucleotide sequence