Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04985 and MPMX19_04986 are separated by 122 nucleotides MPMX19_04986 and MPMX19_04987 are separated by 41 nucleotides MPMX19_04987 and MPMX19_04988 are separated by 28 nucleotides
MPMX19_04985: MPMX19_04985 - HTH-type transcriptional regulator DmlR, at 462,286 to 463,206
_04985
MPMX19_04986: MPMX19_04986 - hypothetical protein, at 463,329 to 463,973
_04986
MPMX19_04987: MPMX19_04987 - hypothetical protein, at 464,015 to 464,938
_04987
MPMX19_04988: MPMX19_04988 - hypothetical protein, at 464,967 to 465,848
_04988
Position (kb) 463
464 Strain fitness (log2 ratio) -2
-1
0
1
2 at 462.458 kb on + strand, within MPMX19_04985 at 462.459 kb on - strand, within MPMX19_04985 at 462.893 kb on + strand, within MPMX19_04985 at 463.172 kb on + strand at 463.172 kb on + strand at 463.172 kb on + strand at 463.173 kb on - strand at 463.173 kb on - strand at 463.173 kb on - strand at 463.242 kb on + strand at 463.243 kb on - strand at 463.243 kb on - strand at 463.243 kb on - strand at 463.243 kb on - strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.353 kb on + strand at 463.354 kb on - strand at 463.354 kb on - strand at 463.354 kb on - strand at 463.354 kb on - strand at 463.354 kb on - strand at 463.354 kb on - strand at 463.354 kb on - strand at 463.354 kb on - strand at 463.383 kb on + strand at 463.383 kb on + strand at 463.384 kb on - strand at 463.515 kb on + strand, within MPMX19_04986 at 463.515 kb on + strand, within MPMX19_04986 at 463.515 kb on + strand, within MPMX19_04986 at 463.516 kb on - strand, within MPMX19_04986 at 463.516 kb on - strand, within MPMX19_04986 at 463.695 kb on + strand, within MPMX19_04986 at 463.695 kb on + strand, within MPMX19_04986 at 463.696 kb on - strand, within MPMX19_04986 at 463.696 kb on - strand, within MPMX19_04986 at 464.268 kb on + strand, within MPMX19_04987 at 464.268 kb on + strand, within MPMX19_04987 at 464.268 kb on + strand, within MPMX19_04987 at 464.269 kb on - strand, within MPMX19_04987 at 464.269 kb on - strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.300 kb on + strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.301 kb on - strand, within MPMX19_04987 at 464.324 kb on + strand, within MPMX19_04987 at 464.325 kb on - strand, within MPMX19_04987 at 464.325 kb on - strand, within MPMX19_04987 at 464.325 kb on - strand, within MPMX19_04987 at 464.325 kb on - strand, within MPMX19_04987 at 464.327 kb on + strand, within MPMX19_04987 at 464.327 kb on + strand, within MPMX19_04987 at 464.328 kb on - strand, within MPMX19_04987 at 464.328 kb on - strand, within MPMX19_04987 at 464.328 kb on - strand, within MPMX19_04987 at 464.328 kb on - strand, within MPMX19_04987 at 464.328 kb on - strand, within MPMX19_04987 at 464.574 kb on - strand, within MPMX19_04987 at 464.789 kb on + strand, within MPMX19_04987 at 464.789 kb on + strand, within MPMX19_04987 at 464.789 kb on + strand, within MPMX19_04987 at 464.789 kb on + strand, within MPMX19_04987 at 464.790 kb on - strand, within MPMX19_04987 at 464.790 kb on - strand, within MPMX19_04987
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 462,458 + MPMX19_04985 0.19 -0.6 462,459 - MPMX19_04985 0.19 +2.2 462,893 + MPMX19_04985 0.66 +1.0 463,172 + -1.0 463,172 + -2.1 463,172 + -0.4 463,173 - -0.2 463,173 - -0.3 463,173 - +0.6 463,242 + -0.3 463,243 - +0.6 463,243 - -0.9 463,243 - +0.6 463,243 - +0.9 463,353 + -0.2 463,353 + -0.5 463,353 + +0.4 463,353 + -0.6 463,353 + -1.1 463,353 + +0.7 463,353 + +0.6 463,353 + +0.5 463,353 + -1.1 463,353 + +0.3 463,353 + +0.5 463,353 + -0.5 463,353 + +1.5 463,353 + -1.2 463,353 + -1.2 463,353 + -1.0 463,354 - +1.2 463,354 - +1.0 463,354 - -0.6 463,354 - -1.9 463,354 - +0.0 463,354 - -1.3 463,354 - +0.4 463,354 - -1.7 463,383 + -2.3 463,383 + -1.6 463,384 - -1.5 463,515 + MPMX19_04986 0.29 -0.3 463,515 + MPMX19_04986 0.29 -0.6 463,515 + MPMX19_04986 0.29 -0.2 463,516 - MPMX19_04986 0.29 +0.9 463,516 - MPMX19_04986 0.29 -1.1 463,695 + MPMX19_04986 0.57 +1.2 463,695 + MPMX19_04986 0.57 -0.4 463,696 - MPMX19_04986 0.57 -2.1 463,696 - MPMX19_04986 0.57 +0.2 464,268 + MPMX19_04987 0.27 -1.3 464,268 + MPMX19_04987 0.27 -0.5 464,268 + MPMX19_04987 0.27 +0.9 464,269 - MPMX19_04987 0.27 +0.4 464,269 - MPMX19_04987 0.27 -0.2 464,300 + MPMX19_04987 0.31 +0.5 464,300 + MPMX19_04987 0.31 -0.4 464,300 + MPMX19_04987 0.31 +0.5 464,300 + MPMX19_04987 0.31 +1.5 464,300 + MPMX19_04987 0.31 -1.2 464,300 + MPMX19_04987 0.31 -0.5 464,300 + MPMX19_04987 0.31 -0.2 464,300 + MPMX19_04987 0.31 -0.4 464,300 + MPMX19_04987 0.31 -0.7 464,300 + MPMX19_04987 0.31 +0.1 464,300 + MPMX19_04987 0.31 -0.8 464,300 + MPMX19_04987 0.31 +0.5 464,300 + MPMX19_04987 0.31 +0.0 464,300 + MPMX19_04987 0.31 +0.9 464,300 + MPMX19_04987 0.31 +1.4 464,300 + MPMX19_04987 0.31 -1.6 464,300 + MPMX19_04987 0.31 +0.4 464,300 + MPMX19_04987 0.31 -1.3 464,300 + MPMX19_04987 0.31 -0.5 464,300 + MPMX19_04987 0.31 -0.9 464,300 + MPMX19_04987 0.31 -1.2 464,300 + MPMX19_04987 0.31 +0.4 464,300 + MPMX19_04987 0.31 -1.9 464,300 + MPMX19_04987 0.31 -1.5 464,300 + MPMX19_04987 0.31 +0.4 464,300 + MPMX19_04987 0.31 -0.9 464,300 + MPMX19_04987 0.31 -0.4 464,300 + MPMX19_04987 0.31 -2.0 464,300 + MPMX19_04987 0.31 -1.9 464,300 + MPMX19_04987 0.31 +0.5 464,300 + MPMX19_04987 0.31 +0.2 464,300 + MPMX19_04987 0.31 +0.6 464,301 - MPMX19_04987 0.31 -0.2 464,301 - MPMX19_04987 0.31 +0.5 464,301 - MPMX19_04987 0.31 +0.4 464,301 - MPMX19_04987 0.31 -0.3 464,301 - MPMX19_04987 0.31 -1.2 464,301 - MPMX19_04987 0.31 -1.1 464,301 - MPMX19_04987 0.31 -0.3 464,301 - MPMX19_04987 0.31 -0.5 464,301 - MPMX19_04987 0.31 -0.2 464,301 - MPMX19_04987 0.31 -0.5 464,301 - MPMX19_04987 0.31 +0.3 464,301 - MPMX19_04987 0.31 -1.9 464,301 - MPMX19_04987 0.31 -0.9 464,301 - MPMX19_04987 0.31 -0.4 464,301 - MPMX19_04987 0.31 -0.4 464,301 - MPMX19_04987 0.31 -0.5 464,301 - MPMX19_04987 0.31 -1.5 464,301 - MPMX19_04987 0.31 -1.2 464,301 - MPMX19_04987 0.31 +0.9 464,301 - MPMX19_04987 0.31 -0.4 464,301 - MPMX19_04987 0.31 -1.0 464,301 - MPMX19_04987 0.31 +0.4 464,301 - MPMX19_04987 0.31 +0.1 464,324 + MPMX19_04987 0.33 -1.1 464,325 - MPMX19_04987 0.34 -0.8 464,325 - MPMX19_04987 0.34 +1.4 464,325 - MPMX19_04987 0.34 +0.9 464,325 - MPMX19_04987 0.34 -0.5 464,327 + MPMX19_04987 0.34 -0.4 464,327 + MPMX19_04987 0.34 -0.0 464,328 - MPMX19_04987 0.34 -0.0 464,328 - MPMX19_04987 0.34 +0.2 464,328 - MPMX19_04987 0.34 -0.1 464,328 - MPMX19_04987 0.34 -0.2 464,328 - MPMX19_04987 0.34 -0.1 464,574 - MPMX19_04987 0.60 +1.3 464,789 + MPMX19_04987 0.84 -1.0 464,789 + MPMX19_04987 0.84 +1.8 464,789 + MPMX19_04987 0.84 +0.1 464,789 + MPMX19_04987 0.84 -1.9 464,790 - MPMX19_04987 0.84 +0.8 464,790 - MPMX19_04987 0.84 +0.9
Or see this region's nucleotide sequence