Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04789 and MPMX19_04790 overlap by 4 nucleotides MPMX19_04790 and MPMX19_04791 overlap by 8 nucleotides MPMX19_04791 and MPMX19_04792 overlap by 4 nucleotides MPMX19_04792 and MPMX19_04793 overlap by 4 nucleotides
MPMX19_04789: MPMX19_04789 - hypothetical protein, at 187,237 to 188,124
_04789
MPMX19_04790: MPMX19_04790 - hypothetical protein, at 188,121 to 188,927
_04790
MPMX19_04791: MPMX19_04791 - 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial, at 188,920 to 189,663
_04791
MPMX19_04792: MPMX19_04792 - hypothetical protein, at 189,660 to 190,547
_04792
MPMX19_04793: MPMX19_04793 - D-inositol-3-phosphate glycosyltransferase, at 190,544 to 192,574
_04793
Position (kb) 188
189
190 Strain fitness (log2 ratio) -2
-1
0
1
2 at 187.966 kb on + strand, within MPMX19_04789 at 187.966 kb on + strand, within MPMX19_04789 at 187.967 kb on - strand, within MPMX19_04789 at 187.967 kb on - strand, within MPMX19_04789 at 187.967 kb on - strand, within MPMX19_04789 at 187.967 kb on - strand, within MPMX19_04789 at 187.976 kb on + strand, within MPMX19_04789 at 187.976 kb on + strand, within MPMX19_04789 at 187.977 kb on - strand, within MPMX19_04789 at 187.977 kb on - strand, within MPMX19_04789 at 188.470 kb on + strand, within MPMX19_04790 at 188.470 kb on + strand, within MPMX19_04790 at 188.470 kb on + strand, within MPMX19_04790 at 188.470 kb on + strand, within MPMX19_04790 at 188.470 kb on + strand, within MPMX19_04790 at 188.470 kb on + strand, within MPMX19_04790 at 188.471 kb on - strand, within MPMX19_04790 at 188.471 kb on - strand, within MPMX19_04790 at 188.471 kb on - strand, within MPMX19_04790 at 188.471 kb on - strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.812 kb on + strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 188.813 kb on - strand, within MPMX19_04790 at 189.155 kb on + strand, within MPMX19_04791 at 189.156 kb on - strand, within MPMX19_04791 at 189.512 kb on + strand, within MPMX19_04791 at 189.512 kb on + strand, within MPMX19_04791 at 189.512 kb on + strand, within MPMX19_04791 at 189.512 kb on + strand, within MPMX19_04791 at 189.513 kb on - strand, within MPMX19_04791 at 189.513 kb on - strand, within MPMX19_04791 at 189.638 kb on + strand at 189.722 kb on - strand at 189.916 kb on + strand, within MPMX19_04792 at 189.916 kb on + strand, within MPMX19_04792 at 189.917 kb on - strand, within MPMX19_04792 at 189.917 kb on - strand, within MPMX19_04792 at 189.917 kb on - strand, within MPMX19_04792 at 189.955 kb on + strand, within MPMX19_04792 at 189.955 kb on + strand, within MPMX19_04792 at 189.955 kb on + strand, within MPMX19_04792 at 190.333 kb on + strand, within MPMX19_04792 at 190.333 kb on + strand, within MPMX19_04792 at 190.334 kb on - strand, within MPMX19_04792 at 190.334 kb on - strand, within MPMX19_04792 at 190.529 kb on + strand at 190.530 kb on - strand at 190.530 kb on - strand at 190.530 kb on - strand at 190.530 kb on - strand at 190.594 kb on - strand at 190.594 kb on - strand at 190.594 kb on - strand at 190.594 kb on - strand at 190.594 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 187,966 + MPMX19_04789 0.82 -2.2 187,966 + MPMX19_04789 0.82 +0.9 187,967 - MPMX19_04789 0.82 +0.8 187,967 - MPMX19_04789 0.82 -0.7 187,967 - MPMX19_04789 0.82 -1.2 187,967 - MPMX19_04789 0.82 +0.5 187,976 + MPMX19_04789 0.83 -2.0 187,976 + MPMX19_04789 0.83 +0.5 187,977 - MPMX19_04789 0.83 -1.5 187,977 - MPMX19_04789 0.83 -0.5 188,470 + MPMX19_04790 0.43 +2.3 188,470 + MPMX19_04790 0.43 -1.0 188,470 + MPMX19_04790 0.43 -0.2 188,470 + MPMX19_04790 0.43 +0.9 188,470 + MPMX19_04790 0.43 +0.6 188,470 + MPMX19_04790 0.43 -0.2 188,471 - MPMX19_04790 0.43 +0.2 188,471 - MPMX19_04790 0.43 -1.4 188,471 - MPMX19_04790 0.43 -2.2 188,471 - MPMX19_04790 0.43 +1.1 188,812 + MPMX19_04790 0.86 -1.2 188,812 + MPMX19_04790 0.86 -0.3 188,812 + MPMX19_04790 0.86 -0.2 188,812 + MPMX19_04790 0.86 -0.7 188,812 + MPMX19_04790 0.86 +0.1 188,812 + MPMX19_04790 0.86 +0.3 188,812 + MPMX19_04790 0.86 -0.9 188,812 + MPMX19_04790 0.86 -0.8 188,812 + MPMX19_04790 0.86 -0.7 188,812 + MPMX19_04790 0.86 -0.7 188,812 + MPMX19_04790 0.86 +0.2 188,812 + MPMX19_04790 0.86 +0.1 188,812 + MPMX19_04790 0.86 -1.3 188,812 + MPMX19_04790 0.86 -0.9 188,812 + MPMX19_04790 0.86 -2.3 188,812 + MPMX19_04790 0.86 -1.0 188,812 + MPMX19_04790 0.86 -1.2 188,812 + MPMX19_04790 0.86 -0.1 188,812 + MPMX19_04790 0.86 -1.5 188,812 + MPMX19_04790 0.86 +0.7 188,812 + MPMX19_04790 0.86 -1.8 188,812 + MPMX19_04790 0.86 -1.1 188,812 + MPMX19_04790 0.86 -0.1 188,812 + MPMX19_04790 0.86 -1.1 188,812 + MPMX19_04790 0.86 -2.2 188,813 - MPMX19_04790 0.86 +0.6 188,813 - MPMX19_04790 0.86 -0.7 188,813 - MPMX19_04790 0.86 -1.0 188,813 - MPMX19_04790 0.86 -0.4 188,813 - MPMX19_04790 0.86 +0.4 188,813 - MPMX19_04790 0.86 -0.5 188,813 - MPMX19_04790 0.86 +0.1 188,813 - MPMX19_04790 0.86 -0.9 188,813 - MPMX19_04790 0.86 +0.6 188,813 - MPMX19_04790 0.86 +1.9 188,813 - MPMX19_04790 0.86 -0.9 188,813 - MPMX19_04790 0.86 +0.7 188,813 - MPMX19_04790 0.86 -0.9 189,155 + MPMX19_04791 0.32 -0.8 189,156 - MPMX19_04791 0.32 +0.5 189,512 + MPMX19_04791 0.80 -0.9 189,512 + MPMX19_04791 0.80 -0.7 189,512 + MPMX19_04791 0.80 +0.6 189,512 + MPMX19_04791 0.80 -0.7 189,513 - MPMX19_04791 0.80 +0.3 189,513 - MPMX19_04791 0.80 -2.3 189,638 + -1.1 189,722 - -1.1 189,916 + MPMX19_04792 0.29 +0.0 189,916 + MPMX19_04792 0.29 +0.3 189,917 - MPMX19_04792 0.29 +0.7 189,917 - MPMX19_04792 0.29 -0.8 189,917 - MPMX19_04792 0.29 -0.9 189,955 + MPMX19_04792 0.33 -0.7 189,955 + MPMX19_04792 0.33 +0.3 189,955 + MPMX19_04792 0.33 -0.4 190,333 + MPMX19_04792 0.76 -0.4 190,333 + MPMX19_04792 0.76 -0.6 190,334 - MPMX19_04792 0.76 -0.1 190,334 - MPMX19_04792 0.76 +1.1 190,529 + -1.2 190,530 - -0.8 190,530 - -0.4 190,530 - +0.7 190,530 - -0.8 190,594 - +0.2 190,594 - -0.7 190,594 - -0.9 190,594 - +0.3 190,594 - -0.1
Or see this region's nucleotide sequence