Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04755

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_04754 and MPMX19_04755 are separated by 17 nucleotidesMPMX19_04755 and MPMX19_04756 overlap by 4 nucleotidesMPMX19_04756 and MPMX19_04757 are separated by 1 nucleotides MPMX19_04754: MPMX19_04754 - Cysteine desulfurase, at 145,742 to 146,995 _04754 MPMX19_04755: MPMX19_04755 - Ureidoglycolate lyase, at 147,013 to 147,540 _04755 MPMX19_04756: MPMX19_04756 - Glutamine transport ATP-binding protein GlnQ, at 147,537 to 148,346 _04756 MPMX19_04757: MPMX19_04757 - L-cystine transport system permease protein YecS, at 148,348 to 149,019 _04757 Position (kb) 147 148Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 146.040 kb on + strand, within MPMX19_04754at 146.040 kb on + strand, within MPMX19_04754at 146.040 kb on + strand, within MPMX19_04754at 146.041 kb on - strand, within MPMX19_04754at 146.157 kb on + strand, within MPMX19_04754at 146.157 kb on + strand, within MPMX19_04754at 146.157 kb on + strand, within MPMX19_04754at 146.157 kb on + strand, within MPMX19_04754at 146.157 kb on + strand, within MPMX19_04754at 146.158 kb on - strand, within MPMX19_04754at 146.158 kb on - strand, within MPMX19_04754at 146.158 kb on - strand, within MPMX19_04754at 146.158 kb on - strand, within MPMX19_04754at 146.193 kb on + strand, within MPMX19_04754at 146.193 kb on + strand, within MPMX19_04754at 146.194 kb on - strand, within MPMX19_04754at 146.194 kb on - strand, within MPMX19_04754at 146.194 kb on - strand, within MPMX19_04754at 146.247 kb on + strand, within MPMX19_04754at 146.247 kb on + strand, within MPMX19_04754at 146.247 kb on + strand, within MPMX19_04754at 146.247 kb on + strand, within MPMX19_04754at 146.247 kb on + strand, within MPMX19_04754at 146.247 kb on + strand, within MPMX19_04754at 146.247 kb on + strand, within MPMX19_04754at 146.247 kb on + strand, within MPMX19_04754at 146.247 kb on + strand, within MPMX19_04754at 146.247 kb on + strand, within MPMX19_04754at 146.247 kb on + strand, within MPMX19_04754at 146.248 kb on - strand, within MPMX19_04754at 146.248 kb on - strand, within MPMX19_04754at 146.248 kb on - strand, within MPMX19_04754at 146.248 kb on - strand, within MPMX19_04754at 146.248 kb on - strand, within MPMX19_04754at 146.248 kb on - strand, within MPMX19_04754at 146.248 kb on - strand, within MPMX19_04754at 146.248 kb on - strand, within MPMX19_04754at 146.248 kb on - strand, within MPMX19_04754at 146.293 kb on - strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.316 kb on + strand, within MPMX19_04754at 146.317 kb on - strand, within MPMX19_04754at 146.317 kb on - strand, within MPMX19_04754at 146.317 kb on - strand, within MPMX19_04754at 146.317 kb on - strand, within MPMX19_04754at 146.317 kb on - strand, within MPMX19_04754at 146.317 kb on - strand, within MPMX19_04754at 146.317 kb on - strand, within MPMX19_04754at 146.317 kb on - strand, within MPMX19_04754at 146.317 kb on - strand, within MPMX19_04754at 146.317 kb on - strand, within MPMX19_04754at 146.317 kb on - strand, within MPMX19_04754at 146.325 kb on + strand, within MPMX19_04754at 146.325 kb on + strand, within MPMX19_04754at 146.325 kb on + strand, within MPMX19_04754at 146.326 kb on - strand, within MPMX19_04754at 146.326 kb on - strand, within MPMX19_04754at 146.326 kb on - strand, within MPMX19_04754at 146.326 kb on - strand, within MPMX19_04754at 146.326 kb on - strand, within MPMX19_04754at 146.326 kb on - strand, within MPMX19_04754at 146.340 kb on + strand, within MPMX19_04754at 146.340 kb on + strand, within MPMX19_04754at 146.340 kb on + strand, within MPMX19_04754at 146.340 kb on + strand, within MPMX19_04754at 146.340 kb on + strand, within MPMX19_04754at 146.340 kb on + strand, within MPMX19_04754at 146.340 kb on + strand, within MPMX19_04754at 146.340 kb on + strand, within MPMX19_04754at 146.340 kb on + strand, within MPMX19_04754at 146.340 kb on + strand, within MPMX19_04754at 146.340 kb on + strand, within MPMX19_04754at 146.341 kb on - strand, within MPMX19_04754at 146.341 kb on - strand, within MPMX19_04754at 146.341 kb on - strand, within MPMX19_04754at 146.341 kb on - strand, within MPMX19_04754at 146.341 kb on - strand, within MPMX19_04754at 146.341 kb on - strand, within MPMX19_04754at 146.341 kb on - strand, within MPMX19_04754at 146.343 kb on + strand, within MPMX19_04754at 146.343 kb on + strand, within MPMX19_04754at 146.343 kb on + strand, within MPMX19_04754at 146.343 kb on + strand, within MPMX19_04754at 146.343 kb on + strand, within MPMX19_04754at 146.344 kb on - strand, within MPMX19_04754at 146.344 kb on - strand, within MPMX19_04754at 146.344 kb on - strand, within MPMX19_04754at 146.388 kb on + strand, within MPMX19_04754at 146.389 kb on - strand, within MPMX19_04754at 146.700 kb on + strand, within MPMX19_04754at 146.700 kb on + strand, within MPMX19_04754at 146.700 kb on + strand, within MPMX19_04754at 146.700 kb on + strand, within MPMX19_04754at 146.700 kb on + strand, within MPMX19_04754at 146.700 kb on + strand, within MPMX19_04754at 146.701 kb on - strand, within MPMX19_04754at 146.820 kb on + strand, within MPMX19_04754at 146.820 kb on + strand, within MPMX19_04754at 146.821 kb on - strand, within MPMX19_04754at 146.821 kb on - strand, within MPMX19_04754at 146.821 kb on - strand, within MPMX19_04754at 146.821 kb on - strand, within MPMX19_04754at 146.821 kb on - strand, within MPMX19_04754at 146.821 kb on - strand, within MPMX19_04754at 146.821 kb on - strand, within MPMX19_04754at 146.821 kb on - strand, within MPMX19_04754at 146.821 kb on - strand, within MPMX19_04754at 146.821 kb on - strand, within MPMX19_04754at 146.821 kb on - strand, within MPMX19_04754at 146.856 kb on + strand, within MPMX19_04754at 146.857 kb on - strand, within MPMX19_04754at 147.167 kb on + strand, within MPMX19_04755at 147.167 kb on + strand, within MPMX19_04755at 147.167 kb on + strand, within MPMX19_04755at 147.167 kb on + strand, within MPMX19_04755at 147.167 kb on + strand, within MPMX19_04755at 147.167 kb on + strand, within MPMX19_04755at 147.168 kb on - strand, within MPMX19_04755at 147.168 kb on - strand, within MPMX19_04755at 147.168 kb on - strand, within MPMX19_04755at 147.168 kb on - strand, within MPMX19_04755at 147.168 kb on - strand, within MPMX19_04755at 147.356 kb on + strand, within MPMX19_04755at 147.356 kb on + strand, within MPMX19_04755at 147.357 kb on - strand, within MPMX19_04755at 147.357 kb on - strand, within MPMX19_04755at 147.416 kb on + strand, within MPMX19_04755at 147.417 kb on - strand, within MPMX19_04755at 148.105 kb on + strand, within MPMX19_04756at 148.105 kb on + strand, within MPMX19_04756at 148.106 kb on - strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.231 kb on + strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.232 kb on - strand, within MPMX19_04756at 148.316 kb on + strandat 148.331 kb on + strandat 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.421 kb on + strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757at 148.422 kb on - strand, within MPMX19_04757

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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146,040 + MPMX19_04754 0.24 -0.5
146,040 + MPMX19_04754 0.24 +0.1
146,040 + MPMX19_04754 0.24 +0.1
146,041 - MPMX19_04754 0.24 -0.1
146,157 + MPMX19_04754 0.33 +1.2
146,157 + MPMX19_04754 0.33 +0.5
146,157 + MPMX19_04754 0.33 -1.2
146,157 + MPMX19_04754 0.33 +0.9
146,157 + MPMX19_04754 0.33 -1.1
146,158 - MPMX19_04754 0.33 -1.1
146,158 - MPMX19_04754 0.33 -0.7
146,158 - MPMX19_04754 0.33 -0.2
146,158 - MPMX19_04754 0.33 +0.9
146,193 + MPMX19_04754 0.36 -1.5
146,193 + MPMX19_04754 0.36 -0.2
146,194 - MPMX19_04754 0.36 -0.1
146,194 - MPMX19_04754 0.36 -0.9
146,194 - MPMX19_04754 0.36 -0.5
146,247 + MPMX19_04754 0.40 -0.7
146,247 + MPMX19_04754 0.40 -0.7
146,247 + MPMX19_04754 0.40 +0.2
146,247 + MPMX19_04754 0.40 +0.3
146,247 + MPMX19_04754 0.40 -1.0
146,247 + MPMX19_04754 0.40 -0.1
146,247 + MPMX19_04754 0.40 +0.0
146,247 + MPMX19_04754 0.40 -0.9
146,247 + MPMX19_04754 0.40 -0.8
146,247 + MPMX19_04754 0.40 -1.0
146,247 + MPMX19_04754 0.40 -1.7
146,248 - MPMX19_04754 0.40 +0.5
146,248 - MPMX19_04754 0.40 -0.3
146,248 - MPMX19_04754 0.40 +0.8
146,248 - MPMX19_04754 0.40 -1.2
146,248 - MPMX19_04754 0.40 -0.1
146,248 - MPMX19_04754 0.40 +0.9
146,248 - MPMX19_04754 0.40 -1.7
146,248 - MPMX19_04754 0.40 -0.9
146,248 - MPMX19_04754 0.40 -1.0
146,293 - MPMX19_04754 0.44 -0.5
146,316 + MPMX19_04754 0.46 +0.6
146,316 + MPMX19_04754 0.46 +0.2
146,316 + MPMX19_04754 0.46 +0.3
146,316 + MPMX19_04754 0.46 -1.1
146,316 + MPMX19_04754 0.46 +0.2
146,316 + MPMX19_04754 0.46 +0.3
146,316 + MPMX19_04754 0.46 -0.9
146,316 + MPMX19_04754 0.46 +0.2
146,316 + MPMX19_04754 0.46 +0.3
146,316 + MPMX19_04754 0.46 -1.1
146,316 + MPMX19_04754 0.46 -0.8
146,316 + MPMX19_04754 0.46 +0.3
146,316 + MPMX19_04754 0.46 -0.3
146,316 + MPMX19_04754 0.46 -0.2
146,316 + MPMX19_04754 0.46 +0.6
146,317 - MPMX19_04754 0.46 -1.0
146,317 - MPMX19_04754 0.46 +0.3
146,317 - MPMX19_04754 0.46 +0.4
146,317 - MPMX19_04754 0.46 -0.9
146,317 - MPMX19_04754 0.46 -0.7
146,317 - MPMX19_04754 0.46 -1.2
146,317 - MPMX19_04754 0.46 -0.9
146,317 - MPMX19_04754 0.46 +1.1
146,317 - MPMX19_04754 0.46 +0.6
146,317 - MPMX19_04754 0.46 +0.0
146,317 - MPMX19_04754 0.46 -2.9
146,325 + MPMX19_04754 0.46 -1.2
146,325 + MPMX19_04754 0.46 -1.0
146,325 + MPMX19_04754 0.46 +0.0
146,326 - MPMX19_04754 0.47 -0.0
146,326 - MPMX19_04754 0.47 +0.9
146,326 - MPMX19_04754 0.47 +1.9
146,326 - MPMX19_04754 0.47 -2.1
146,326 - MPMX19_04754 0.47 +1.2
146,326 - MPMX19_04754 0.47 +1.3
146,340 + MPMX19_04754 0.48 -0.4
146,340 + MPMX19_04754 0.48 -0.2
146,340 + MPMX19_04754 0.48 -0.7
146,340 + MPMX19_04754 0.48 -0.1
146,340 + MPMX19_04754 0.48 -0.4
146,340 + MPMX19_04754 0.48 -0.9
146,340 + MPMX19_04754 0.48 -0.9
146,340 + MPMX19_04754 0.48 +0.2
146,340 + MPMX19_04754 0.48 +0.7
146,340 + MPMX19_04754 0.48 -0.4
146,340 + MPMX19_04754 0.48 -0.7
146,341 - MPMX19_04754 0.48 -0.8
146,341 - MPMX19_04754 0.48 -0.1
146,341 - MPMX19_04754 0.48 +0.1
146,341 - MPMX19_04754 0.48 +0.2
146,341 - MPMX19_04754 0.48 -0.0
146,341 - MPMX19_04754 0.48 +0.7
146,341 - MPMX19_04754 0.48 -0.8
146,343 + MPMX19_04754 0.48 -0.0
146,343 + MPMX19_04754 0.48 -2.0
146,343 + MPMX19_04754 0.48 -0.3
146,343 + MPMX19_04754 0.48 -0.7
146,343 + MPMX19_04754 0.48 -0.9
146,344 - MPMX19_04754 0.48 -2.2
146,344 - MPMX19_04754 0.48 +0.3
146,344 - MPMX19_04754 0.48 +0.4
146,388 + MPMX19_04754 0.52 +0.6
146,389 - MPMX19_04754 0.52 -0.2
146,700 + MPMX19_04754 0.76 +0.5
146,700 + MPMX19_04754 0.76 +0.3
146,700 + MPMX19_04754 0.76 +1.9
146,700 + MPMX19_04754 0.76 +0.2
146,700 + MPMX19_04754 0.76 +0.2
146,700 + MPMX19_04754 0.76 +0.1
146,701 - MPMX19_04754 0.76 -1.1
146,820 + MPMX19_04754 0.86 +0.2
146,820 + MPMX19_04754 0.86 -0.1
146,821 - MPMX19_04754 0.86 +0.3
146,821 - MPMX19_04754 0.86 -0.7
146,821 - MPMX19_04754 0.86 -1.4
146,821 - MPMX19_04754 0.86 -0.8
146,821 - MPMX19_04754 0.86 -0.4
146,821 - MPMX19_04754 0.86 +0.3
146,821 - MPMX19_04754 0.86 -0.3
146,821 - MPMX19_04754 0.86 +0.3
146,821 - MPMX19_04754 0.86 -0.1
146,821 - MPMX19_04754 0.86 -0.3
146,821 - MPMX19_04754 0.86 -0.0
146,856 + MPMX19_04754 0.89 -0.2
146,857 - MPMX19_04754 0.89 +0.9
147,167 + MPMX19_04755 0.29 -0.2
147,167 + MPMX19_04755 0.29 +0.3
147,167 + MPMX19_04755 0.29 +0.2
147,167 + MPMX19_04755 0.29 -0.3
147,167 + MPMX19_04755 0.29 -0.0
147,167 + MPMX19_04755 0.29 -1.9
147,168 - MPMX19_04755 0.29 +0.3
147,168 - MPMX19_04755 0.29 +0.3
147,168 - MPMX19_04755 0.29 -0.7
147,168 - MPMX19_04755 0.29 -0.5
147,168 - MPMX19_04755 0.29 -0.5
147,356 + MPMX19_04755 0.65 -0.3
147,356 + MPMX19_04755 0.65 +0.2
147,357 - MPMX19_04755 0.65 +1.1
147,357 - MPMX19_04755 0.65 +2.5
147,416 + MPMX19_04755 0.76 -2.3
147,417 - MPMX19_04755 0.77 +0.6
148,105 + MPMX19_04756 0.70 -1.6
148,105 + MPMX19_04756 0.70 -1.1
148,106 - MPMX19_04756 0.70 -2.4
148,231 + MPMX19_04756 0.86 -0.5
148,231 + MPMX19_04756 0.86 +0.3
148,231 + MPMX19_04756 0.86 -0.4
148,231 + MPMX19_04756 0.86 +0.3
148,231 + MPMX19_04756 0.86 -1.5
148,231 + MPMX19_04756 0.86 -0.3
148,231 + MPMX19_04756 0.86 -0.1
148,231 + MPMX19_04756 0.86 -0.4
148,231 + MPMX19_04756 0.86 +0.7
148,231 + MPMX19_04756 0.86 -1.3
148,231 + MPMX19_04756 0.86 +0.0
148,231 + MPMX19_04756 0.86 -1.5
148,231 + MPMX19_04756 0.86 +1.3
148,231 + MPMX19_04756 0.86 -1.0
148,231 + MPMX19_04756 0.86 -1.2
148,231 + MPMX19_04756 0.86 -0.2
148,231 + MPMX19_04756 0.86 +0.1
148,232 - MPMX19_04756 0.86 +0.2
148,232 - MPMX19_04756 0.86 +0.2
148,232 - MPMX19_04756 0.86 -0.8
148,232 - MPMX19_04756 0.86 +0.7
148,232 - MPMX19_04756 0.86 +0.3
148,232 - MPMX19_04756 0.86 +0.2
148,232 - MPMX19_04756 0.86 -0.8
148,232 - MPMX19_04756 0.86 +0.3
148,232 - MPMX19_04756 0.86 -1.1
148,232 - MPMX19_04756 0.86 -1.9
148,232 - MPMX19_04756 0.86 +1.4
148,232 - MPMX19_04756 0.86 +0.6
148,232 - MPMX19_04756 0.86 -0.1
148,232 - MPMX19_04756 0.86 -0.7
148,232 - MPMX19_04756 0.86 -0.2
148,316 + -0.8
148,331 + -2.2
148,421 + MPMX19_04757 0.11 -1.4
148,421 + MPMX19_04757 0.11 -1.2
148,421 + MPMX19_04757 0.11 -0.8
148,421 + MPMX19_04757 0.11 -1.1
148,421 + MPMX19_04757 0.11 +1.2
148,421 + MPMX19_04757 0.11 -0.3
148,421 + MPMX19_04757 0.11 +1.0
148,421 + MPMX19_04757 0.11 +0.6
148,421 + MPMX19_04757 0.11 -0.7
148,421 + MPMX19_04757 0.11 +0.6
148,421 + MPMX19_04757 0.11 -1.4
148,421 + MPMX19_04757 0.11 -0.4
148,421 + MPMX19_04757 0.11 -0.9
148,421 + MPMX19_04757 0.11 -0.5
148,422 - MPMX19_04757 0.11 +0.0
148,422 - MPMX19_04757 0.11 -2.0
148,422 - MPMX19_04757 0.11 -2.0
148,422 - MPMX19_04757 0.11 -1.1
148,422 - MPMX19_04757 0.11 -1.1
148,422 - MPMX19_04757 0.11 -0.5
148,422 - MPMX19_04757 0.11 +0.0
148,422 - MPMX19_04757 0.11 +0.2
148,422 - MPMX19_04757 0.11 +0.2
148,422 - MPMX19_04757 0.11 +0.3
148,422 - MPMX19_04757 0.11 -1.0
148,422 - MPMX19_04757 0.11 +0.9
148,422 - MPMX19_04757 0.11 -1.9

Or see this region's nucleotide sequence