Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04598 and MPMX19_04599 overlap by 4 nucleotides MPMX19_04599 and MPMX19_04600 are separated by 116 nucleotides MPMX19_04600 and MPMX19_04601 are separated by 569 nucleotides
MPMX19_04598: MPMX19_04598 - putative ABC transporter ATP-binding protein YadG, at 982,744 to 983,670
_04598
MPMX19_04599: MPMX19_04599 - Inner membrane transport permease YadH, at 983,667 to 984,428
_04599
MPMX19_04600: MPMX19_04600 - hypothetical protein, at 984,545 to 984,994
_04600
MPMX19_04601: MPMX19_04601 - hypothetical protein, at 985,564 to 986,859
_04601
Position (kb) 984
985 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 983.599 kb on + strand at 983.599 kb on + strand at 983.599 kb on + strand at 983.600 kb on - strand at 983.600 kb on - strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.769 kb on + strand, within MPMX19_04599 at 983.769 kb on + strand, within MPMX19_04599 at 983.769 kb on + strand, within MPMX19_04599 at 983.770 kb on - strand, within MPMX19_04599 at 983.770 kb on - strand, within MPMX19_04599 at 983.770 kb on - strand, within MPMX19_04599 at 983.770 kb on - strand, within MPMX19_04599 at 983.829 kb on + strand, within MPMX19_04599 at 983.829 kb on + strand, within MPMX19_04599 at 983.829 kb on + strand, within MPMX19_04599 at 983.830 kb on - strand, within MPMX19_04599 at 983.884 kb on + strand, within MPMX19_04599 at 983.884 kb on + strand, within MPMX19_04599 at 983.884 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.920 kb on - strand, within MPMX19_04599 at 983.920 kb on - strand, within MPMX19_04599 at 983.920 kb on - strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.982 kb on + strand, within MPMX19_04599 at 983.983 kb on - strand, within MPMX19_04599 at 984.222 kb on + strand, within MPMX19_04599 at 984.223 kb on - strand, within MPMX19_04599 at 984.223 kb on - strand, within MPMX19_04599 at 984.223 kb on - strand, within MPMX19_04599 at 984.223 kb on - strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.283 kb on - strand, within MPMX19_04599 at 984.313 kb on - strand, within MPMX19_04599 at 984.313 kb on - strand, within MPMX19_04599 at 984.412 kb on - strand at 984.534 kb on + strand at 984.534 kb on + strand at 984.534 kb on + strand at 984.534 kb on + strand at 984.534 kb on + strand at 984.535 kb on - strand at 984.535 kb on - strand at 985.263 kb on + strand at 985.263 kb on + strand at 985.263 kb on + strand at 985.263 kb on + strand at 985.263 kb on + strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.274 kb on + strand at 985.275 kb on - strand at 985.275 kb on - strand at 985.275 kb on - strand at 985.275 kb on - strand at 985.276 kb on + strand at 985.277 kb on - strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.401 kb on - strand at 985.401 kb on - strand at 985.401 kb on - strand at 985.501 kb on + strand at 985.501 kb on + strand at 985.502 kb on - strand at 985.502 kb on - strand at 985.502 kb on - strand at 985.628 kb on + strand at 985.642 kb on + strand at 985.642 kb on + strand at 985.643 kb on - strand at 985.655 kb on - strand at 985.673 kb on - strand at 985.720 kb on + strand, within MPMX19_04601 at 985.720 kb on + strand, within MPMX19_04601 at 985.720 kb on + strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.753 kb on + strand, within MPMX19_04601 at 985.754 kb on - strand, within MPMX19_04601 at 985.861 kb on + strand, within MPMX19_04601 at 985.862 kb on - strand, within MPMX19_04601 at 985.862 kb on - strand, within MPMX19_04601 at 985.932 kb on + strand, within MPMX19_04601 at 985.932 kb on + strand, within MPMX19_04601 at 985.932 kb on + strand, within MPMX19_04601 at 985.933 kb on - strand, within MPMX19_04601 at 985.945 kb on + strand, within MPMX19_04601 at 985.945 kb on + strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 983,599 + -1.1 983,599 + -1.7 983,599 + -0.1 983,600 - -0.3 983,600 - -0.9 983,694 + -0.9 983,694 + -0.8 983,694 + +0.0 983,694 + +0.7 983,694 + -1.6 983,694 + -0.9 983,694 + -0.7 983,694 + +1.7 983,694 + +0.1 983,694 + +1.0 983,694 + -0.8 983,694 + +0.0 983,694 + -0.0 983,694 + +0.4 983,694 + -0.1 983,694 + -0.8 983,694 + -1.3 983,694 + -0.7 983,694 + -0.2 983,694 + +0.9 983,695 - -1.1 983,695 - +0.3 983,695 - -1.1 983,695 - -0.8 983,695 - -0.3 983,695 - -0.6 983,695 - +0.6 983,769 + MPMX19_04599 0.13 -0.5 983,769 + MPMX19_04599 0.13 +0.4 983,769 + MPMX19_04599 0.13 -0.8 983,770 - MPMX19_04599 0.14 -0.3 983,770 - MPMX19_04599 0.14 +1.7 983,770 - MPMX19_04599 0.14 +1.0 983,770 - MPMX19_04599 0.14 -0.9 983,829 + MPMX19_04599 0.21 -1.1 983,829 + MPMX19_04599 0.21 +0.0 983,829 + MPMX19_04599 0.21 -0.6 983,830 - MPMX19_04599 0.21 +0.4 983,884 + MPMX19_04599 0.28 +0.8 983,884 + MPMX19_04599 0.28 +1.6 983,884 + MPMX19_04599 0.28 -1.0 983,907 + MPMX19_04599 0.31 +0.6 983,907 + MPMX19_04599 0.31 -1.2 983,907 + MPMX19_04599 0.31 -0.4 983,907 + MPMX19_04599 0.31 +0.1 983,907 + MPMX19_04599 0.31 +0.7 983,907 + MPMX19_04599 0.31 +1.8 983,907 + MPMX19_04599 0.31 -0.8 983,907 + MPMX19_04599 0.31 -0.6 983,907 + MPMX19_04599 0.31 -1.1 983,907 + MPMX19_04599 0.31 -0.6 983,907 + MPMX19_04599 0.31 -1.1 983,907 + MPMX19_04599 0.31 -0.4 983,907 + MPMX19_04599 0.31 +0.1 983,908 - MPMX19_04599 0.32 +0.5 983,908 - MPMX19_04599 0.32 +0.2 983,908 - MPMX19_04599 0.32 +0.9 983,908 - MPMX19_04599 0.32 -0.1 983,908 - MPMX19_04599 0.32 +0.0 983,908 - MPMX19_04599 0.32 -0.1 983,920 - MPMX19_04599 0.33 +1.4 983,920 - MPMX19_04599 0.33 +0.5 983,920 - MPMX19_04599 0.33 -0.7 983,934 + MPMX19_04599 0.35 -0.6 983,934 + MPMX19_04599 0.35 +1.8 983,934 + MPMX19_04599 0.35 +0.2 983,934 + MPMX19_04599 0.35 +0.9 983,934 + MPMX19_04599 0.35 -1.0 983,935 - MPMX19_04599 0.35 -0.8 983,935 - MPMX19_04599 0.35 +0.0 983,935 - MPMX19_04599 0.35 +0.7 983,935 - MPMX19_04599 0.35 -1.6 983,935 - MPMX19_04599 0.35 -0.6 983,935 - MPMX19_04599 0.35 +0.4 983,935 - MPMX19_04599 0.35 -0.1 983,982 + MPMX19_04599 0.41 +0.0 983,983 - MPMX19_04599 0.41 -0.6 984,222 + MPMX19_04599 0.73 -1.4 984,223 - MPMX19_04599 0.73 +0.3 984,223 - MPMX19_04599 0.73 +1.0 984,223 - MPMX19_04599 0.73 -0.5 984,223 - MPMX19_04599 0.73 -0.1 984,282 + MPMX19_04599 0.81 -1.1 984,282 + MPMX19_04599 0.81 +0.3 984,282 + MPMX19_04599 0.81 +1.1 984,282 + MPMX19_04599 0.81 -1.0 984,282 + MPMX19_04599 0.81 +0.8 984,282 + MPMX19_04599 0.81 +0.1 984,283 - MPMX19_04599 0.81 +0.8 984,313 - MPMX19_04599 0.85 +1.4 984,313 - MPMX19_04599 0.85 -0.9 984,412 - +0.3 984,534 + -1.4 984,534 + +1.3 984,534 + +1.6 984,534 + +0.0 984,534 + -0.4 984,535 - +0.6 984,535 - +0.5 985,263 + +0.7 985,263 + +1.0 985,263 + +0.2 985,263 + -0.1 985,263 + -0.3 985,264 - +0.7 985,264 - +0.4 985,264 - -0.6 985,264 - +0.4 985,264 - +1.0 985,264 - +0.2 985,264 - +2.8 985,264 - -0.1 985,264 - -1.1 985,264 - +0.6 985,274 + +2.0 985,275 - -0.6 985,275 - +1.7 985,275 - +0.3 985,275 - +0.2 985,276 + -0.6 985,277 - +0.3 985,400 + -1.6 985,400 + +0.2 985,400 + +0.4 985,400 + -1.9 985,400 + -1.9 985,400 + +0.8 985,400 + +0.5 985,400 + +0.4 985,400 + -0.5 985,401 - -1.4 985,401 - +0.4 985,401 - -0.6 985,501 + -0.7 985,501 + -0.6 985,502 - +0.3 985,502 - +0.0 985,502 - +0.7 985,628 + -0.7 985,642 + +0.8 985,642 + -1.7 985,643 - -0.4 985,655 - -1.1 985,673 - -1.1 985,720 + MPMX19_04601 0.12 +0.6 985,720 + MPMX19_04601 0.12 +0.2 985,720 + MPMX19_04601 0.12 -1.8 985,721 - MPMX19_04601 0.12 -0.3 985,721 - MPMX19_04601 0.12 -1.3 985,721 - MPMX19_04601 0.12 +1.7 985,721 - MPMX19_04601 0.12 +0.0 985,721 - MPMX19_04601 0.12 -0.3 985,721 - MPMX19_04601 0.12 -0.6 985,721 - MPMX19_04601 0.12 -0.6 985,721 - MPMX19_04601 0.12 +0.4 985,753 + MPMX19_04601 0.15 -1.0 985,754 - MPMX19_04601 0.15 -2.2 985,861 + MPMX19_04601 0.23 +0.7 985,862 - MPMX19_04601 0.23 -2.6 985,862 - MPMX19_04601 0.23 -0.4 985,932 + MPMX19_04601 0.28 -1.3 985,932 + MPMX19_04601 0.28 +0.2 985,932 + MPMX19_04601 0.28 +0.6 985,933 - MPMX19_04601 0.28 -0.6 985,945 + MPMX19_04601 0.29 -1.0 985,945 + MPMX19_04601 0.29 -1.6 985,946 - MPMX19_04601 0.29 -1.1 985,946 - MPMX19_04601 0.29 -1.1 985,946 - MPMX19_04601 0.29 -0.5 985,946 - MPMX19_04601 0.29 -0.6 985,946 - MPMX19_04601 0.29 +0.5 985,946 - MPMX19_04601 0.29 -0.6 985,946 - MPMX19_04601 0.29 -0.5
Or see this region's nucleotide sequence