Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04597 and MPMX19_04598 are separated by 86 nucleotides MPMX19_04598 and MPMX19_04599 overlap by 4 nucleotides MPMX19_04599 and MPMX19_04600 are separated by 116 nucleotides
MPMX19_04597: MPMX19_04597 - Adaptive-response sensory-kinase SasA, at 981,017 to 982,657
_04597
MPMX19_04598: MPMX19_04598 - putative ABC transporter ATP-binding protein YadG, at 982,744 to 983,670
_04598
MPMX19_04599: MPMX19_04599 - Inner membrane transport permease YadH, at 983,667 to 984,428
_04599
MPMX19_04600: MPMX19_04600 - hypothetical protein, at 984,545 to 984,994
_04600
Position (kb) 982
983
984 Strain fitness (log2 ratio) -2
-1
0
1
2 at 981.770 kb on + strand, within MPMX19_04597 at 981.771 kb on - strand, within MPMX19_04597 at 981.771 kb on - strand, within MPMX19_04597 at 982.013 kb on + strand, within MPMX19_04597 at 982.014 kb on - strand, within MPMX19_04597 at 982.014 kb on - strand, within MPMX19_04597 at 982.014 kb on - strand, within MPMX19_04597 at 982.014 kb on - strand, within MPMX19_04597 at 982.014 kb on - strand, within MPMX19_04597 at 982.014 kb on - strand, within MPMX19_04597 at 982.014 kb on - strand, within MPMX19_04597 at 982.014 kb on - strand, within MPMX19_04597 at 982.102 kb on + strand, within MPMX19_04597 at 982.102 kb on + strand, within MPMX19_04597 at 982.103 kb on - strand, within MPMX19_04597 at 982.103 kb on - strand, within MPMX19_04597 at 982.103 kb on - strand, within MPMX19_04597 at 982.291 kb on + strand, within MPMX19_04597 at 982.291 kb on + strand, within MPMX19_04597 at 982.291 kb on + strand, within MPMX19_04597 at 982.292 kb on - strand, within MPMX19_04597 at 982.645 kb on - strand at 982.645 kb on - strand at 982.683 kb on + strand at 982.684 kb on - strand at 982.743 kb on + strand at 982.743 kb on + strand at 982.743 kb on + strand at 982.743 kb on + strand at 982.743 kb on + strand at 982.743 kb on + strand at 982.744 kb on - strand at 982.752 kb on + strand at 982.752 kb on + strand at 982.752 kb on + strand at 982.755 kb on - strand at 982.783 kb on + strand at 982.783 kb on + strand at 982.783 kb on + strand at 982.783 kb on + strand at 982.783 kb on + strand at 982.783 kb on + strand at 982.783 kb on + strand at 982.783 kb on + strand at 982.783 kb on + strand at 982.783 kb on + strand at 982.783 kb on + strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 982.784 kb on - strand at 983.320 kb on + strand, within MPMX19_04598 at 983.320 kb on + strand, within MPMX19_04598 at 983.320 kb on + strand, within MPMX19_04598 at 983.320 kb on + strand, within MPMX19_04598 at 983.320 kb on + strand, within MPMX19_04598 at 983.320 kb on + strand, within MPMX19_04598 at 983.320 kb on + strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.321 kb on - strand, within MPMX19_04598 at 983.322 kb on + strand, within MPMX19_04598 at 983.322 kb on + strand, within MPMX19_04598 at 983.322 kb on + strand, within MPMX19_04598 at 983.322 kb on + strand, within MPMX19_04598 at 983.322 kb on + strand, within MPMX19_04598 at 983.322 kb on + strand, within MPMX19_04598 at 983.323 kb on - strand, within MPMX19_04598 at 983.323 kb on - strand, within MPMX19_04598 at 983.323 kb on - strand, within MPMX19_04598 at 983.323 kb on - strand, within MPMX19_04598 at 983.323 kb on - strand, within MPMX19_04598 at 983.524 kb on + strand, within MPMX19_04598 at 983.524 kb on + strand, within MPMX19_04598 at 983.524 kb on + strand, within MPMX19_04598 at 983.524 kb on + strand, within MPMX19_04598 at 983.524 kb on + strand, within MPMX19_04598 at 983.524 kb on + strand, within MPMX19_04598 at 983.525 kb on - strand, within MPMX19_04598 at 983.525 kb on - strand, within MPMX19_04598 at 983.525 kb on - strand, within MPMX19_04598 at 983.599 kb on + strand at 983.599 kb on + strand at 983.599 kb on + strand at 983.600 kb on - strand at 983.600 kb on - strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.769 kb on + strand, within MPMX19_04599 at 983.769 kb on + strand, within MPMX19_04599 at 983.769 kb on + strand, within MPMX19_04599 at 983.770 kb on - strand, within MPMX19_04599 at 983.770 kb on - strand, within MPMX19_04599 at 983.770 kb on - strand, within MPMX19_04599 at 983.770 kb on - strand, within MPMX19_04599 at 983.829 kb on + strand, within MPMX19_04599 at 983.829 kb on + strand, within MPMX19_04599 at 983.829 kb on + strand, within MPMX19_04599 at 983.830 kb on - strand, within MPMX19_04599 at 983.884 kb on + strand, within MPMX19_04599 at 983.884 kb on + strand, within MPMX19_04599 at 983.884 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.920 kb on - strand, within MPMX19_04599 at 983.920 kb on - strand, within MPMX19_04599 at 983.920 kb on - strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.982 kb on + strand, within MPMX19_04599 at 983.983 kb on - strand, within MPMX19_04599 at 984.222 kb on + strand, within MPMX19_04599 at 984.223 kb on - strand, within MPMX19_04599 at 984.223 kb on - strand, within MPMX19_04599 at 984.223 kb on - strand, within MPMX19_04599 at 984.223 kb on - strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.283 kb on - strand, within MPMX19_04599 at 984.313 kb on - strand, within MPMX19_04599 at 984.313 kb on - strand, within MPMX19_04599 at 984.412 kb on - strand at 984.534 kb on + strand at 984.534 kb on + strand at 984.534 kb on + strand at 984.534 kb on + strand at 984.534 kb on + strand at 984.535 kb on - strand at 984.535 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 981,770 + MPMX19_04597 0.46 +1.2 981,771 - MPMX19_04597 0.46 -1.4 981,771 - MPMX19_04597 0.46 -0.1 982,013 + MPMX19_04597 0.61 +0.5 982,014 - MPMX19_04597 0.61 +0.6 982,014 - MPMX19_04597 0.61 +0.4 982,014 - MPMX19_04597 0.61 +0.5 982,014 - MPMX19_04597 0.61 -0.7 982,014 - MPMX19_04597 0.61 +0.1 982,014 - MPMX19_04597 0.61 -2.3 982,014 - MPMX19_04597 0.61 -1.1 982,014 - MPMX19_04597 0.61 -1.8 982,102 + MPMX19_04597 0.66 -0.1 982,102 + MPMX19_04597 0.66 +0.2 982,103 - MPMX19_04597 0.66 +1.0 982,103 - MPMX19_04597 0.66 -0.8 982,103 - MPMX19_04597 0.66 -0.1 982,291 + MPMX19_04597 0.78 +0.4 982,291 + MPMX19_04597 0.78 +1.6 982,291 + MPMX19_04597 0.78 -0.3 982,292 - MPMX19_04597 0.78 +0.9 982,645 - +1.0 982,645 - +0.4 982,683 + -0.9 982,684 - -1.1 982,743 + -0.7 982,743 + +1.3 982,743 + -1.1 982,743 + -1.4 982,743 + -1.4 982,743 + +0.0 982,744 - +0.7 982,752 + -0.3 982,752 + +0.1 982,752 + -1.1 982,755 - +0.7 982,783 + -1.4 982,783 + +1.8 982,783 + -0.8 982,783 + +0.1 982,783 + +0.1 982,783 + -0.9 982,783 + +0.0 982,783 + +0.0 982,783 + +0.1 982,783 + -0.8 982,783 + +0.3 982,784 - -0.5 982,784 - +0.9 982,784 - +0.1 982,784 - +0.2 982,784 - -1.1 982,784 - -0.4 982,784 - +1.3 982,784 - -1.7 982,784 - -1.7 982,784 - -1.4 982,784 - +0.2 982,784 - +0.0 982,784 - +0.5 982,784 - -0.6 982,784 - -0.4 982,784 - -0.8 982,784 - -0.3 982,784 - -0.6 982,784 - +0.0 982,784 - -0.2 983,320 + MPMX19_04598 0.62 -2.1 983,320 + MPMX19_04598 0.62 +0.1 983,320 + MPMX19_04598 0.62 +0.4 983,320 + MPMX19_04598 0.62 -1.3 983,320 + MPMX19_04598 0.62 -1.1 983,320 + MPMX19_04598 0.62 -0.4 983,320 + MPMX19_04598 0.62 -0.3 983,321 - MPMX19_04598 0.62 -0.6 983,321 - MPMX19_04598 0.62 +0.8 983,321 - MPMX19_04598 0.62 -1.2 983,321 - MPMX19_04598 0.62 -1.2 983,321 - MPMX19_04598 0.62 +0.0 983,321 - MPMX19_04598 0.62 -1.0 983,321 - MPMX19_04598 0.62 -0.3 983,321 - MPMX19_04598 0.62 +0.0 983,321 - MPMX19_04598 0.62 +0.1 983,321 - MPMX19_04598 0.62 -2.0 983,321 - MPMX19_04598 0.62 +0.1 983,321 - MPMX19_04598 0.62 +0.0 983,321 - MPMX19_04598 0.62 -0.4 983,321 - MPMX19_04598 0.62 -1.1 983,321 - MPMX19_04598 0.62 -1.1 983,321 - MPMX19_04598 0.62 -0.6 983,321 - MPMX19_04598 0.62 +0.2 983,321 - MPMX19_04598 0.62 -1.9 983,321 - MPMX19_04598 0.62 -0.6 983,322 + MPMX19_04598 0.62 +0.3 983,322 + MPMX19_04598 0.62 -2.2 983,322 + MPMX19_04598 0.62 -0.6 983,322 + MPMX19_04598 0.62 +0.1 983,322 + MPMX19_04598 0.62 -1.9 983,322 + MPMX19_04598 0.62 -1.3 983,323 - MPMX19_04598 0.62 -1.9 983,323 - MPMX19_04598 0.62 +0.3 983,323 - MPMX19_04598 0.62 +0.2 983,323 - MPMX19_04598 0.62 -1.0 983,323 - MPMX19_04598 0.62 +1.0 983,524 + MPMX19_04598 0.84 +0.1 983,524 + MPMX19_04598 0.84 -0.4 983,524 + MPMX19_04598 0.84 +0.0 983,524 + MPMX19_04598 0.84 -0.8 983,524 + MPMX19_04598 0.84 +0.1 983,524 + MPMX19_04598 0.84 -0.0 983,525 - MPMX19_04598 0.84 -1.0 983,525 - MPMX19_04598 0.84 -0.1 983,525 - MPMX19_04598 0.84 -0.2 983,599 + -1.1 983,599 + -1.7 983,599 + -0.1 983,600 - -0.3 983,600 - -0.9 983,694 + -0.9 983,694 + -0.8 983,694 + +0.0 983,694 + +0.7 983,694 + -1.6 983,694 + -0.9 983,694 + -0.7 983,694 + +1.7 983,694 + +0.1 983,694 + +1.0 983,694 + -0.8 983,694 + +0.0 983,694 + -0.0 983,694 + +0.4 983,694 + -0.1 983,694 + -0.8 983,694 + -1.3 983,694 + -0.7 983,694 + -0.2 983,694 + +0.9 983,695 - -1.1 983,695 - +0.3 983,695 - -1.1 983,695 - -0.8 983,695 - -0.3 983,695 - -0.6 983,695 - +0.6 983,769 + MPMX19_04599 0.13 -0.5 983,769 + MPMX19_04599 0.13 +0.4 983,769 + MPMX19_04599 0.13 -0.8 983,770 - MPMX19_04599 0.14 -0.3 983,770 - MPMX19_04599 0.14 +1.7 983,770 - MPMX19_04599 0.14 +1.0 983,770 - MPMX19_04599 0.14 -0.9 983,829 + MPMX19_04599 0.21 -1.1 983,829 + MPMX19_04599 0.21 +0.0 983,829 + MPMX19_04599 0.21 -0.6 983,830 - MPMX19_04599 0.21 +0.4 983,884 + MPMX19_04599 0.28 +0.8 983,884 + MPMX19_04599 0.28 +1.6 983,884 + MPMX19_04599 0.28 -1.0 983,907 + MPMX19_04599 0.31 +0.6 983,907 + MPMX19_04599 0.31 -1.2 983,907 + MPMX19_04599 0.31 -0.4 983,907 + MPMX19_04599 0.31 +0.1 983,907 + MPMX19_04599 0.31 +0.7 983,907 + MPMX19_04599 0.31 +1.8 983,907 + MPMX19_04599 0.31 -0.8 983,907 + MPMX19_04599 0.31 -0.6 983,907 + MPMX19_04599 0.31 -1.1 983,907 + MPMX19_04599 0.31 -0.6 983,907 + MPMX19_04599 0.31 -1.1 983,907 + MPMX19_04599 0.31 -0.4 983,907 + MPMX19_04599 0.31 +0.1 983,908 - MPMX19_04599 0.32 +0.5 983,908 - MPMX19_04599 0.32 +0.2 983,908 - MPMX19_04599 0.32 +0.9 983,908 - MPMX19_04599 0.32 -0.1 983,908 - MPMX19_04599 0.32 +0.0 983,908 - MPMX19_04599 0.32 -0.1 983,920 - MPMX19_04599 0.33 +1.4 983,920 - MPMX19_04599 0.33 +0.5 983,920 - MPMX19_04599 0.33 -0.7 983,934 + MPMX19_04599 0.35 -0.6 983,934 + MPMX19_04599 0.35 +1.8 983,934 + MPMX19_04599 0.35 +0.2 983,934 + MPMX19_04599 0.35 +0.9 983,934 + MPMX19_04599 0.35 -1.0 983,935 - MPMX19_04599 0.35 -0.8 983,935 - MPMX19_04599 0.35 +0.0 983,935 - MPMX19_04599 0.35 +0.7 983,935 - MPMX19_04599 0.35 -1.6 983,935 - MPMX19_04599 0.35 -0.6 983,935 - MPMX19_04599 0.35 +0.4 983,935 - MPMX19_04599 0.35 -0.1 983,982 + MPMX19_04599 0.41 +0.0 983,983 - MPMX19_04599 0.41 -0.6 984,222 + MPMX19_04599 0.73 -1.4 984,223 - MPMX19_04599 0.73 +0.3 984,223 - MPMX19_04599 0.73 +1.0 984,223 - MPMX19_04599 0.73 -0.5 984,223 - MPMX19_04599 0.73 -0.1 984,282 + MPMX19_04599 0.81 -1.1 984,282 + MPMX19_04599 0.81 +0.3 984,282 + MPMX19_04599 0.81 +1.1 984,282 + MPMX19_04599 0.81 -1.0 984,282 + MPMX19_04599 0.81 +0.8 984,282 + MPMX19_04599 0.81 +0.1 984,283 - MPMX19_04599 0.81 +0.8 984,313 - MPMX19_04599 0.85 +1.4 984,313 - MPMX19_04599 0.85 -0.9 984,412 - +0.3 984,534 + -1.4 984,534 + +1.3 984,534 + +1.6 984,534 + +0.0 984,534 + -0.4 984,535 - +0.6 984,535 - +0.5
Or see this region's nucleotide sequence