Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03837 and MPMX19_03838 are separated by 12 nucleotides MPMX19_03838 and MPMX19_03839 are separated by 326 nucleotides
MPMX19_03837: MPMX19_03837 - HTH-type transcriptional regulator PgrR, at 75,173 to 76,072
_03837
MPMX19_03838: MPMX19_03838 - Hercynine oxygenase, at 76,085 to 77,080
_03838
MPMX19_03839: MPMX19_03839 - hypothetical protein, at 77,407 to 78,225
_03839
Position (kb) 76
77
78 Strain fitness (log2 ratio) -2
-1
0
1
2 at 75.130 kb on + strand at 75.130 kb on + strand at 75.131 kb on - strand at 75.131 kb on - strand at 75.173 kb on - strand at 75.173 kb on - strand at 75.398 kb on + strand, within MPMX19_03837 at 75.398 kb on + strand, within MPMX19_03837 at 75.398 kb on + strand, within MPMX19_03837 at 75.399 kb on - strand, within MPMX19_03837 at 75.680 kb on + strand, within MPMX19_03837 at 75.681 kb on - strand, within MPMX19_03837 at 75.681 kb on - strand, within MPMX19_03837 at 75.893 kb on + strand, within MPMX19_03837 at 75.893 kb on + strand, within MPMX19_03837 at 75.893 kb on + strand, within MPMX19_03837 at 75.893 kb on + strand, within MPMX19_03837 at 75.893 kb on + strand, within MPMX19_03837 at 75.893 kb on + strand, within MPMX19_03837 at 75.894 kb on - strand, within MPMX19_03837 at 75.894 kb on - strand, within MPMX19_03837 at 75.894 kb on - strand, within MPMX19_03837 at 75.894 kb on - strand, within MPMX19_03837 at 75.894 kb on - strand, within MPMX19_03837 at 76.113 kb on + strand at 76.113 kb on + strand at 76.113 kb on + strand at 76.122 kb on + strand at 76.122 kb on + strand at 76.122 kb on + strand at 76.122 kb on + strand at 76.123 kb on - strand at 76.167 kb on + strand at 76.167 kb on + strand at 76.167 kb on + strand at 76.167 kb on + strand at 76.167 kb on + strand at 76.167 kb on + strand at 76.167 kb on + strand at 76.167 kb on + strand at 76.167 kb on + strand at 76.167 kb on + strand at 76.167 kb on + strand at 76.167 kb on + strand at 76.168 kb on - strand at 76.168 kb on - strand at 76.168 kb on - strand at 76.168 kb on - strand at 76.284 kb on + strand, within MPMX19_03838 at 76.284 kb on + strand, within MPMX19_03838 at 76.284 kb on + strand, within MPMX19_03838 at 76.284 kb on + strand, within MPMX19_03838 at 76.284 kb on + strand, within MPMX19_03838 at 76.285 kb on - strand, within MPMX19_03838 at 76.285 kb on - strand, within MPMX19_03838 at 76.285 kb on - strand, within MPMX19_03838 at 76.308 kb on + strand, within MPMX19_03838 at 76.309 kb on - strand, within MPMX19_03838 at 76.473 kb on + strand, within MPMX19_03838 at 76.473 kb on + strand, within MPMX19_03838 at 76.473 kb on + strand, within MPMX19_03838 at 76.473 kb on + strand, within MPMX19_03838 at 76.473 kb on + strand, within MPMX19_03838 at 76.473 kb on + strand, within MPMX19_03838 at 76.474 kb on - strand, within MPMX19_03838 at 76.474 kb on - strand, within MPMX19_03838 at 76.503 kb on + strand, within MPMX19_03838 at 76.503 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.539 kb on + strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.540 kb on - strand, within MPMX19_03838 at 76.554 kb on + strand, within MPMX19_03838 at 76.555 kb on - strand, within MPMX19_03838 at 76.654 kb on - strand, within MPMX19_03838 at 76.654 kb on - strand, within MPMX19_03838 at 76.707 kb on + strand, within MPMX19_03838 at 76.707 kb on + strand, within MPMX19_03838 at 76.707 kb on + strand, within MPMX19_03838 at 76.707 kb on + strand, within MPMX19_03838 at 76.707 kb on + strand, within MPMX19_03838 at 76.707 kb on + strand, within MPMX19_03838 at 76.707 kb on + strand, within MPMX19_03838 at 76.708 kb on - strand, within MPMX19_03838 at 76.708 kb on - strand, within MPMX19_03838 at 76.708 kb on - strand, within MPMX19_03838 at 76.708 kb on - strand, within MPMX19_03838 at 76.728 kb on + strand, within MPMX19_03838 at 76.728 kb on + strand, within MPMX19_03838 at 76.728 kb on + strand, within MPMX19_03838 at 76.729 kb on - strand, within MPMX19_03838 at 76.824 kb on + strand, within MPMX19_03838 at 76.824 kb on + strand, within MPMX19_03838 at 76.824 kb on + strand, within MPMX19_03838 at 76.824 kb on + strand, within MPMX19_03838 at 76.824 kb on + strand, within MPMX19_03838 at 76.824 kb on + strand, within MPMX19_03838 at 76.824 kb on + strand, within MPMX19_03838 at 76.824 kb on + strand, within MPMX19_03838 at 76.824 kb on + strand, within MPMX19_03838 at 76.825 kb on - strand, within MPMX19_03838 at 76.825 kb on - strand, within MPMX19_03838 at 76.825 kb on - strand, within MPMX19_03838 at 76.825 kb on - strand, within MPMX19_03838 at 76.825 kb on - strand, within MPMX19_03838 at 76.825 kb on - strand, within MPMX19_03838 at 77.166 kb on + strand at 77.166 kb on + strand at 77.191 kb on + strand at 77.191 kb on + strand at 77.191 kb on + strand at 77.191 kb on + strand at 77.192 kb on - strand at 77.192 kb on - strand at 77.192 kb on - strand at 77.204 kb on + strand at 77.204 kb on + strand at 77.205 kb on - strand at 77.205 kb on - strand at 77.368 kb on + strand at 77.369 kb on - strand at 77.369 kb on - strand at 77.369 kb on - strand at 77.476 kb on + strand at 77.476 kb on + strand at 77.476 kb on + strand at 77.476 kb on + strand at 77.477 kb on - strand at 77.477 kb on - strand at 77.477 kb on - strand at 77.477 kb on - strand at 77.477 kb on - strand at 77.477 kb on - strand at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.491 kb on + strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.492 kb on - strand, within MPMX19_03839 at 77.724 kb on + strand, within MPMX19_03839 at 77.725 kb on - strand, within MPMX19_03839 at 77.740 kb on + strand, within MPMX19_03839 at 77.740 kb on + strand, within MPMX19_03839 at 77.740 kb on + strand, within MPMX19_03839 at 77.740 kb on + strand, within MPMX19_03839 at 77.740 kb on + strand, within MPMX19_03839 at 77.740 kb on + strand, within MPMX19_03839 at 77.740 kb on + strand, within MPMX19_03839 at 77.740 kb on + strand, within MPMX19_03839 at 77.740 kb on + strand, within MPMX19_03839 at 77.740 kb on + strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.741 kb on - strand, within MPMX19_03839 at 77.860 kb on + strand, within MPMX19_03839 at 77.860 kb on + strand, within MPMX19_03839 at 77.860 kb on + strand, within MPMX19_03839 at 77.861 kb on - strand, within MPMX19_03839 at 77.861 kb on - strand, within MPMX19_03839
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 75,130 + -1.3 75,130 + -2.4 75,131 - +0.5 75,131 - -1.8 75,173 - -1.2 75,173 - -1.1 75,398 + MPMX19_03837 0.25 -0.3 75,398 + MPMX19_03837 0.25 +0.1 75,398 + MPMX19_03837 0.25 +0.4 75,399 - MPMX19_03837 0.25 +1.2 75,680 + MPMX19_03837 0.56 -0.0 75,681 - MPMX19_03837 0.56 +2.0 75,681 - MPMX19_03837 0.56 -0.4 75,893 + MPMX19_03837 0.80 -0.9 75,893 + MPMX19_03837 0.80 -0.2 75,893 + MPMX19_03837 0.80 -0.2 75,893 + MPMX19_03837 0.80 -1.0 75,893 + MPMX19_03837 0.80 -1.8 75,893 + MPMX19_03837 0.80 -1.1 75,894 - MPMX19_03837 0.80 -1.1 75,894 - MPMX19_03837 0.80 -0.1 75,894 - MPMX19_03837 0.80 -1.1 75,894 - MPMX19_03837 0.80 -2.7 75,894 - MPMX19_03837 0.80 -1.2 76,113 + +0.0 76,113 + +1.1 76,113 + -0.9 76,122 + +0.0 76,122 + -0.5 76,122 + -0.8 76,122 + +0.8 76,123 - -0.9 76,167 + -0.6 76,167 + +0.6 76,167 + -0.5 76,167 + +0.0 76,167 + -2.0 76,167 + +0.5 76,167 + -0.9 76,167 + +0.7 76,167 + -0.9 76,167 + +0.2 76,167 + +0.2 76,167 + -0.6 76,168 - +0.5 76,168 - -2.0 76,168 - +1.0 76,168 - -0.4 76,284 + MPMX19_03838 0.20 -1.1 76,284 + MPMX19_03838 0.20 +0.6 76,284 + MPMX19_03838 0.20 -1.1 76,284 + MPMX19_03838 0.20 -1.1 76,284 + MPMX19_03838 0.20 -0.7 76,285 - MPMX19_03838 0.20 +0.3 76,285 - MPMX19_03838 0.20 -1.3 76,285 - MPMX19_03838 0.20 +0.9 76,308 + MPMX19_03838 0.22 +0.0 76,309 - MPMX19_03838 0.22 -0.3 76,473 + MPMX19_03838 0.39 -0.8 76,473 + MPMX19_03838 0.39 +0.4 76,473 + MPMX19_03838 0.39 -0.3 76,473 + MPMX19_03838 0.39 +0.9 76,473 + MPMX19_03838 0.39 -0.7 76,473 + MPMX19_03838 0.39 +0.5 76,474 - MPMX19_03838 0.39 +0.3 76,474 - MPMX19_03838 0.39 -0.2 76,503 + MPMX19_03838 0.42 -0.3 76,503 + MPMX19_03838 0.42 -0.6 76,539 + MPMX19_03838 0.46 -1.5 76,539 + MPMX19_03838 0.46 +0.3 76,539 + MPMX19_03838 0.46 -0.4 76,539 + MPMX19_03838 0.46 -2.4 76,539 + MPMX19_03838 0.46 -0.2 76,539 + MPMX19_03838 0.46 +0.3 76,539 + MPMX19_03838 0.46 +0.6 76,539 + MPMX19_03838 0.46 -0.0 76,539 + MPMX19_03838 0.46 -0.4 76,539 + MPMX19_03838 0.46 -0.8 76,539 + MPMX19_03838 0.46 -0.4 76,539 + MPMX19_03838 0.46 +0.6 76,539 + MPMX19_03838 0.46 +0.2 76,539 + MPMX19_03838 0.46 -2.1 76,539 + MPMX19_03838 0.46 +1.0 76,539 + MPMX19_03838 0.46 -0.4 76,539 + MPMX19_03838 0.46 +1.5 76,539 + MPMX19_03838 0.46 +0.0 76,539 + MPMX19_03838 0.46 -1.3 76,539 + MPMX19_03838 0.46 -0.9 76,539 + MPMX19_03838 0.46 +0.5 76,539 + MPMX19_03838 0.46 +1.5 76,539 + MPMX19_03838 0.46 -0.7 76,539 + MPMX19_03838 0.46 -2.2 76,539 + MPMX19_03838 0.46 -1.2 76,539 + MPMX19_03838 0.46 +0.5 76,539 + MPMX19_03838 0.46 -0.3 76,540 - MPMX19_03838 0.46 -0.1 76,540 - MPMX19_03838 0.46 -0.3 76,540 - MPMX19_03838 0.46 -0.1 76,540 - MPMX19_03838 0.46 -0.3 76,540 - MPMX19_03838 0.46 -0.1 76,540 - MPMX19_03838 0.46 +0.7 76,540 - MPMX19_03838 0.46 -1.3 76,540 - MPMX19_03838 0.46 -0.8 76,540 - MPMX19_03838 0.46 -0.2 76,540 - MPMX19_03838 0.46 +0.1 76,540 - MPMX19_03838 0.46 +0.8 76,540 - MPMX19_03838 0.46 -1.5 76,540 - MPMX19_03838 0.46 +0.2 76,540 - MPMX19_03838 0.46 -0.4 76,554 + MPMX19_03838 0.47 -0.0 76,555 - MPMX19_03838 0.47 -0.8 76,654 - MPMX19_03838 0.57 +0.2 76,654 - MPMX19_03838 0.57 +1.0 76,707 + MPMX19_03838 0.62 -0.7 76,707 + MPMX19_03838 0.62 +1.0 76,707 + MPMX19_03838 0.62 +0.5 76,707 + MPMX19_03838 0.62 +0.0 76,707 + MPMX19_03838 0.62 -1.0 76,707 + MPMX19_03838 0.62 -0.2 76,707 + MPMX19_03838 0.62 +0.0 76,708 - MPMX19_03838 0.63 +0.7 76,708 - MPMX19_03838 0.63 +0.7 76,708 - MPMX19_03838 0.63 +1.3 76,708 - MPMX19_03838 0.63 +0.5 76,728 + MPMX19_03838 0.65 -0.0 76,728 + MPMX19_03838 0.65 -1.5 76,728 + MPMX19_03838 0.65 +1.6 76,729 - MPMX19_03838 0.65 -0.1 76,824 + MPMX19_03838 0.74 -0.6 76,824 + MPMX19_03838 0.74 +0.6 76,824 + MPMX19_03838 0.74 -1.5 76,824 + MPMX19_03838 0.74 -0.3 76,824 + MPMX19_03838 0.74 -0.5 76,824 + MPMX19_03838 0.74 +0.5 76,824 + MPMX19_03838 0.74 -1.9 76,824 + MPMX19_03838 0.74 +0.5 76,824 + MPMX19_03838 0.74 -0.3 76,825 - MPMX19_03838 0.74 -0.0 76,825 - MPMX19_03838 0.74 -0.3 76,825 - MPMX19_03838 0.74 -0.3 76,825 - MPMX19_03838 0.74 -0.8 76,825 - MPMX19_03838 0.74 +0.7 76,825 - MPMX19_03838 0.74 -0.8 77,166 + +1.5 77,166 + -0.9 77,191 + -0.6 77,191 + +0.5 77,191 + -0.1 77,191 + +0.1 77,192 - -0.1 77,192 - -0.3 77,192 - -1.1 77,204 + -1.4 77,204 + -1.7 77,205 - -0.5 77,205 - -0.0 77,368 + +0.9 77,369 - -0.3 77,369 - -0.9 77,369 - +0.3 77,476 + -0.2 77,476 + +0.2 77,476 + +0.0 77,476 + +0.9 77,477 - +0.5 77,477 - +1.7 77,477 - -1.0 77,477 - -1.0 77,477 - -1.0 77,477 - -1.0 77,491 + MPMX19_03839 0.10 +0.4 77,491 + MPMX19_03839 0.10 -0.4 77,491 + MPMX19_03839 0.10 -0.6 77,491 + MPMX19_03839 0.10 -1.0 77,491 + MPMX19_03839 0.10 -0.3 77,491 + MPMX19_03839 0.10 +1.3 77,491 + MPMX19_03839 0.10 -0.6 77,491 + MPMX19_03839 0.10 +0.8 77,491 + MPMX19_03839 0.10 +2.4 77,491 + MPMX19_03839 0.10 +0.6 77,491 + MPMX19_03839 0.10 -1.7 77,491 + MPMX19_03839 0.10 -1.9 77,491 + MPMX19_03839 0.10 -1.4 77,491 + MPMX19_03839 0.10 +1.0 77,491 + MPMX19_03839 0.10 +1.3 77,492 - MPMX19_03839 0.10 -1.3 77,492 - MPMX19_03839 0.10 +0.8 77,492 - MPMX19_03839 0.10 +0.0 77,492 - MPMX19_03839 0.10 +1.0 77,492 - MPMX19_03839 0.10 +0.6 77,492 - MPMX19_03839 0.10 +0.5 77,492 - MPMX19_03839 0.10 -0.6 77,492 - MPMX19_03839 0.10 +0.5 77,492 - MPMX19_03839 0.10 -0.4 77,492 - MPMX19_03839 0.10 +0.7 77,492 - MPMX19_03839 0.10 -0.5 77,492 - MPMX19_03839 0.10 -0.3 77,492 - MPMX19_03839 0.10 -0.3 77,492 - MPMX19_03839 0.10 -1.7 77,492 - MPMX19_03839 0.10 +0.2 77,492 - MPMX19_03839 0.10 -0.5 77,492 - MPMX19_03839 0.10 -0.5 77,492 - MPMX19_03839 0.10 -0.6 77,492 - MPMX19_03839 0.10 -0.7 77,492 - MPMX19_03839 0.10 +0.1 77,492 - MPMX19_03839 0.10 -1.4 77,492 - MPMX19_03839 0.10 -1.0 77,724 + MPMX19_03839 0.39 -1.7 77,725 - MPMX19_03839 0.39 -1.2 77,740 + MPMX19_03839 0.41 -0.8 77,740 + MPMX19_03839 0.41 -1.1 77,740 + MPMX19_03839 0.41 +0.9 77,740 + MPMX19_03839 0.41 -1.2 77,740 + MPMX19_03839 0.41 -0.1 77,740 + MPMX19_03839 0.41 -1.3 77,740 + MPMX19_03839 0.41 -1.0 77,740 + MPMX19_03839 0.41 +1.6 77,740 + MPMX19_03839 0.41 -0.7 77,740 + MPMX19_03839 0.41 -1.8 77,741 - MPMX19_03839 0.41 -0.1 77,741 - MPMX19_03839 0.41 -1.0 77,741 - MPMX19_03839 0.41 +0.2 77,741 - MPMX19_03839 0.41 +0.2 77,741 - MPMX19_03839 0.41 +1.7 77,741 - MPMX19_03839 0.41 -1.0 77,741 - MPMX19_03839 0.41 -0.9 77,741 - MPMX19_03839 0.41 -0.4 77,741 - MPMX19_03839 0.41 +0.9 77,741 - MPMX19_03839 0.41 +1.0 77,741 - MPMX19_03839 0.41 -0.1 77,741 - MPMX19_03839 0.41 -2.0 77,741 - MPMX19_03839 0.41 -0.5 77,860 + MPMX19_03839 0.55 -0.3 77,860 + MPMX19_03839 0.55 -0.5 77,860 + MPMX19_03839 0.55 -0.6 77,861 - MPMX19_03839 0.55 +1.0 77,861 - MPMX19_03839 0.55 +0.8
Or see this region's nucleotide sequence