Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03730 and MPMX19_03731 are separated by 67 nucleotides MPMX19_03731 and MPMX19_03732 are separated by 38 nucleotides MPMX19_03732 and MPMX19_03733 are separated by 215 nucleotides MPMX19_03733 and MPMX19_03734 are separated by 113 nucleotides
MPMX19_03730: MPMX19_03730 - hypothetical protein, at 1,175,618 to 1,177,177
_03730
MPMX19_03731: MPMX19_03731 - hypothetical protein, at 1,177,245 to 1,177,826
_03731
MPMX19_03732: MPMX19_03732 - hypothetical protein, at 1,177,865 to 1,178,299
_03732
MPMX19_03733: MPMX19_03733 - hypothetical protein, at 1,178,515 to 1,178,850
_03733
MPMX19_03734: MPMX19_03734 - RutC family protein YjgH, at 1,178,964 to 1,179,362
_03734
Position (kb)
1177
1178
1179 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.978 kb on + strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1176.979 kb on - strand, within MPMX19_03730 at 1177.597 kb on + strand, within MPMX19_03731 at 1177.597 kb on + strand, within MPMX19_03731 at 1177.597 kb on + strand, within MPMX19_03731 at 1177.597 kb on + strand, within MPMX19_03731 at 1177.598 kb on - strand, within MPMX19_03731 at 1177.598 kb on - strand, within MPMX19_03731 at 1177.598 kb on - strand, within MPMX19_03731 at 1177.598 kb on - strand, within MPMX19_03731 at 1177.598 kb on - strand, within MPMX19_03731 at 1177.598 kb on - strand, within MPMX19_03731 at 1177.598 kb on - strand, within MPMX19_03731 at 1177.598 kb on - strand, within MPMX19_03731 at 1177.598 kb on - strand, within MPMX19_03731 at 1177.598 kb on - strand, within MPMX19_03731 at 1177.802 kb on + strand at 1177.803 kb on - strand at 1178.190 kb on + strand, within MPMX19_03732 at 1178.190 kb on + strand, within MPMX19_03732 at 1178.190 kb on + strand, within MPMX19_03732 at 1178.190 kb on + strand, within MPMX19_03732 at 1178.190 kb on + strand, within MPMX19_03732 at 1178.190 kb on + strand, within MPMX19_03732 at 1178.190 kb on + strand, within MPMX19_03732 at 1178.191 kb on - strand, within MPMX19_03732 at 1178.191 kb on - strand, within MPMX19_03732 at 1178.191 kb on - strand, within MPMX19_03732 at 1178.191 kb on - strand, within MPMX19_03732 at 1178.191 kb on - strand, within MPMX19_03732 at 1178.191 kb on - strand, within MPMX19_03732 at 1178.191 kb on - strand, within MPMX19_03732 at 1178.191 kb on - strand, within MPMX19_03732 at 1178.191 kb on - strand, within MPMX19_03732 at 1178.312 kb on + strand at 1178.312 kb on + strand at 1178.313 kb on - strand at 1178.313 kb on - strand at 1178.349 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,176,978 + MPMX19_03730 0.87 -0.0 1,176,978 + MPMX19_03730 0.87 -0.8 1,176,978 + MPMX19_03730 0.87 -0.1 1,176,978 + MPMX19_03730 0.87 -0.9 1,176,978 + MPMX19_03730 0.87 -1.4 1,176,978 + MPMX19_03730 0.87 +0.5 1,176,978 + MPMX19_03730 0.87 -0.3 1,176,978 + MPMX19_03730 0.87 -1.4 1,176,978 + MPMX19_03730 0.87 -0.7 1,176,978 + MPMX19_03730 0.87 +0.1 1,176,978 + MPMX19_03730 0.87 -1.4 1,176,978 + MPMX19_03730 0.87 -1.5 1,176,978 + MPMX19_03730 0.87 -0.9 1,176,978 + MPMX19_03730 0.87 -0.1 1,176,978 + MPMX19_03730 0.87 -0.6 1,176,978 + MPMX19_03730 0.87 +0.1 1,176,978 + MPMX19_03730 0.87 -0.4 1,176,978 + MPMX19_03730 0.87 -0.1 1,176,979 - MPMX19_03730 0.87 +0.9 1,176,979 - MPMX19_03730 0.87 -0.3 1,176,979 - MPMX19_03730 0.87 -2.2 1,176,979 - MPMX19_03730 0.87 +1.8 1,176,979 - MPMX19_03730 0.87 -1.2 1,176,979 - MPMX19_03730 0.87 -1.3 1,176,979 - MPMX19_03730 0.87 -1.0 1,176,979 - MPMX19_03730 0.87 -0.6 1,176,979 - MPMX19_03730 0.87 -0.1 1,176,979 - MPMX19_03730 0.87 -1.1 1,176,979 - MPMX19_03730 0.87 +0.0 1,176,979 - MPMX19_03730 0.87 +0.6 1,176,979 - MPMX19_03730 0.87 -0.6 1,176,979 - MPMX19_03730 0.87 -0.1 1,176,979 - MPMX19_03730 0.87 -0.9 1,176,979 - MPMX19_03730 0.87 +0.2 1,176,979 - MPMX19_03730 0.87 +1.3 1,176,979 - MPMX19_03730 0.87 -1.1 1,176,979 - MPMX19_03730 0.87 -1.0 1,176,979 - MPMX19_03730 0.87 -1.5 1,176,979 - MPMX19_03730 0.87 -0.6 1,176,979 - MPMX19_03730 0.87 -0.6 1,176,979 - MPMX19_03730 0.87 -1.4 1,176,979 - MPMX19_03730 0.87 +1.7 1,176,979 - MPMX19_03730 0.87 -0.8 1,177,597 + MPMX19_03731 0.60 -0.1 1,177,597 + MPMX19_03731 0.60 -0.8 1,177,597 + MPMX19_03731 0.60 -0.5 1,177,597 + MPMX19_03731 0.60 -1.2 1,177,598 - MPMX19_03731 0.61 -1.0 1,177,598 - MPMX19_03731 0.61 +0.0 1,177,598 - MPMX19_03731 0.61 -1.9 1,177,598 - MPMX19_03731 0.61 -1.1 1,177,598 - MPMX19_03731 0.61 -1.1 1,177,598 - MPMX19_03731 0.61 +0.2 1,177,598 - MPMX19_03731 0.61 -1.4 1,177,598 - MPMX19_03731 0.61 -0.2 1,177,598 - MPMX19_03731 0.61 -0.6 1,177,598 - MPMX19_03731 0.61 -0.6 1,177,802 + -1.4 1,177,803 - -0.2 1,178,190 + MPMX19_03732 0.75 -0.5 1,178,190 + MPMX19_03732 0.75 -0.8 1,178,190 + MPMX19_03732 0.75 -0.1 1,178,190 + MPMX19_03732 0.75 +0.3 1,178,190 + MPMX19_03732 0.75 -0.1 1,178,190 + MPMX19_03732 0.75 -0.1 1,178,190 + MPMX19_03732 0.75 -1.3 1,178,191 - MPMX19_03732 0.75 -0.9 1,178,191 - MPMX19_03732 0.75 -1.1 1,178,191 - MPMX19_03732 0.75 +1.2 1,178,191 - MPMX19_03732 0.75 -0.9 1,178,191 - MPMX19_03732 0.75 -0.1 1,178,191 - MPMX19_03732 0.75 +0.6 1,178,191 - MPMX19_03732 0.75 -2.3 1,178,191 - MPMX19_03732 0.75 -0.1 1,178,191 - MPMX19_03732 0.75 -1.9 1,178,312 + -0.6 1,178,312 + -1.9 1,178,313 - -0.2 1,178,313 - -1.5 1,178,349 - +0.5
Or see this region's nucleotide sequence