Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03682 and MPMX19_03683 are separated by 36 nucleotides MPMX19_03683 and MPMX19_03684 are separated by 3 nucleotides MPMX19_03684 and MPMX19_03685 are separated by 16 nucleotides MPMX19_03685 and MPMX19_03686 are separated by 73 nucleotides
MPMX19_03682: MPMX19_03682 - hypothetical protein, at 1,121,991 to 1,122,356
_03682
MPMX19_03683: MPMX19_03683 - Fe(2+) transporter FeoB, at 1,122,393 to 1,124,327
_03683
MPMX19_03684: MPMX19_03684 - hypothetical protein, at 1,124,331 to 1,124,540
_03684
MPMX19_03685: MPMX19_03685 - hypothetical protein, at 1,124,557 to 1,125,237
_03685
MPMX19_03686: MPMX19_03686 - Quinoprotein alcohol dehydrogenase (cytochrome c), at 1,125,311 to 1,127,227
_03686
Position (kb)
1122
1123
1124
1125 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1121.457 kb on + strand at 1121.505 kb on - strand at 1121.513 kb on - strand at 1121.711 kb on + strand at 1121.711 kb on + strand at 1121.712 kb on - strand at 1121.712 kb on - strand at 1121.931 kb on + strand at 1121.931 kb on + strand at 1121.931 kb on + strand at 1121.932 kb on - strand at 1121.932 kb on - strand at 1122.409 kb on + strand at 1122.409 kb on + strand at 1122.409 kb on + strand at 1122.409 kb on + strand at 1122.409 kb on + strand at 1122.409 kb on + strand at 1122.409 kb on + strand at 1122.409 kb on + strand at 1122.409 kb on + strand at 1122.410 kb on - strand at 1122.410 kb on - strand at 1122.410 kb on - strand at 1122.525 kb on + strand at 1122.525 kb on + strand at 1122.525 kb on + strand at 1122.526 kb on - strand at 1122.526 kb on - strand at 1122.526 kb on - strand at 1122.612 kb on + strand, within MPMX19_03683 at 1122.612 kb on + strand, within MPMX19_03683 at 1122.612 kb on + strand, within MPMX19_03683 at 1122.612 kb on + strand, within MPMX19_03683 at 1122.612 kb on + strand, within MPMX19_03683 at 1122.613 kb on - strand, within MPMX19_03683 at 1122.613 kb on - strand, within MPMX19_03683 at 1122.613 kb on - strand, within MPMX19_03683 at 1122.613 kb on - strand, within MPMX19_03683 at 1122.613 kb on - strand, within MPMX19_03683 at 1122.794 kb on + strand, within MPMX19_03683 at 1122.794 kb on + strand, within MPMX19_03683 at 1122.795 kb on - strand, within MPMX19_03683 at 1122.795 kb on - strand, within MPMX19_03683 at 1122.795 kb on - strand, within MPMX19_03683 at 1122.795 kb on - strand, within MPMX19_03683 at 1122.795 kb on - strand, within MPMX19_03683 at 1122.795 kb on - strand, within MPMX19_03683 at 1122.795 kb on - strand, within MPMX19_03683 at 1122.795 kb on - strand, within MPMX19_03683 at 1122.795 kb on - strand, within MPMX19_03683 at 1122.795 kb on - strand, within MPMX19_03683 at 1122.795 kb on - strand, within MPMX19_03683 at 1123.032 kb on + strand, within MPMX19_03683 at 1123.032 kb on + strand, within MPMX19_03683 at 1123.032 kb on + strand, within MPMX19_03683 at 1123.033 kb on - strand, within MPMX19_03683 at 1123.033 kb on - strand, within MPMX19_03683 at 1123.386 kb on + strand, within MPMX19_03683 at 1123.386 kb on + strand, within MPMX19_03683 at 1123.386 kb on + strand, within MPMX19_03683 at 1123.386 kb on + strand, within MPMX19_03683 at 1123.386 kb on + strand, within MPMX19_03683 at 1123.386 kb on + strand, within MPMX19_03683 at 1123.386 kb on + strand, within MPMX19_03683 at 1123.386 kb on + strand, within MPMX19_03683 at 1123.386 kb on + strand, within MPMX19_03683 at 1123.386 kb on + strand, within MPMX19_03683 at 1123.387 kb on - strand, within MPMX19_03683 at 1123.387 kb on - strand, within MPMX19_03683 at 1123.387 kb on - strand, within MPMX19_03683 at 1123.387 kb on - strand, within MPMX19_03683 at 1123.387 kb on - strand, within MPMX19_03683 at 1123.387 kb on - strand, within MPMX19_03683 at 1123.387 kb on - strand, within MPMX19_03683 at 1123.387 kb on - strand, within MPMX19_03683 at 1123.387 kb on - strand, within MPMX19_03683 at 1123.387 kb on - strand, within MPMX19_03683 at 1123.387 kb on - strand, within MPMX19_03683 at 1123.587 kb on + strand, within MPMX19_03683 at 1123.587 kb on + strand, within MPMX19_03683 at 1123.587 kb on + strand, within MPMX19_03683 at 1123.587 kb on + strand, within MPMX19_03683 at 1123.588 kb on - strand, within MPMX19_03683 at 1123.588 kb on - strand, within MPMX19_03683 at 1123.588 kb on - strand, within MPMX19_03683 at 1123.588 kb on - strand, within MPMX19_03683 at 1123.588 kb on - strand, within MPMX19_03683 at 1123.589 kb on + strand, within MPMX19_03683 at 1123.589 kb on + strand, within MPMX19_03683 at 1123.590 kb on - strand, within MPMX19_03683 at 1123.590 kb on - strand, within MPMX19_03683 at 1123.590 kb on - strand, within MPMX19_03683 at 1123.590 kb on - strand, within MPMX19_03683 at 1123.590 kb on - strand, within MPMX19_03683 at 1123.590 kb on - strand, within MPMX19_03683 at 1123.590 kb on - strand, within MPMX19_03683 at 1123.590 kb on - strand, within MPMX19_03683 at 1123.590 kb on - strand, within MPMX19_03683 at 1123.590 kb on - strand, within MPMX19_03683 at 1123.674 kb on + strand, within MPMX19_03683 at 1123.674 kb on + strand, within MPMX19_03683 at 1123.674 kb on + strand, within MPMX19_03683 at 1123.675 kb on - strand, within MPMX19_03683 at 1123.675 kb on - strand, within MPMX19_03683 at 1123.675 kb on - strand, within MPMX19_03683 at 1123.675 kb on - strand, within MPMX19_03683 at 1123.675 kb on - strand, within MPMX19_03683 at 1123.773 kb on + strand, within MPMX19_03683 at 1123.935 kb on + strand, within MPMX19_03683 at 1123.935 kb on + strand, within MPMX19_03683 at 1123.935 kb on + strand, within MPMX19_03683 at 1123.935 kb on + strand, within MPMX19_03683 at 1123.935 kb on + strand, within MPMX19_03683 at 1123.935 kb on + strand, within MPMX19_03683 at 1123.936 kb on - strand, within MPMX19_03683 at 1123.936 kb on - strand, within MPMX19_03683 at 1123.936 kb on - strand, within MPMX19_03683 at 1124.070 kb on + strand, within MPMX19_03683 at 1124.070 kb on + strand, within MPMX19_03683 at 1124.070 kb on + strand, within MPMX19_03683 at 1124.070 kb on + strand, within MPMX19_03683 at 1124.070 kb on + strand, within MPMX19_03683 at 1124.071 kb on - strand, within MPMX19_03683 at 1124.071 kb on - strand, within MPMX19_03683 at 1124.071 kb on - strand, within MPMX19_03683 at 1124.071 kb on - strand, within MPMX19_03683 at 1124.071 kb on - strand, within MPMX19_03683 at 1124.071 kb on - strand, within MPMX19_03683 at 1124.071 kb on - strand, within MPMX19_03683 at 1124.071 kb on - strand, within MPMX19_03683 at 1124.071 kb on - strand, within MPMX19_03683 at 1124.256 kb on + strand at 1124.256 kb on + strand at 1124.256 kb on + strand at 1124.256 kb on + strand at 1124.256 kb on + strand at 1124.256 kb on + strand at 1124.256 kb on + strand at 1124.256 kb on + strand at 1124.257 kb on - strand at 1124.257 kb on - strand at 1124.257 kb on - strand at 1124.257 kb on - strand at 1124.274 kb on + strand at 1124.275 kb on - strand at 1124.275 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,121,457 + -0.9 1,121,505 - +0.9 1,121,513 - -0.1 1,121,711 + -1.8 1,121,711 + -0.6 1,121,712 - -0.6 1,121,712 - +0.1 1,121,931 + +0.4 1,121,931 + -1.2 1,121,931 + -0.5 1,121,932 - -1.0 1,121,932 - +0.6 1,122,409 + +0.2 1,122,409 + +0.6 1,122,409 + -2.2 1,122,409 + -0.8 1,122,409 + -0.6 1,122,409 + +0.1 1,122,409 + -1.4 1,122,409 + +0.8 1,122,409 + -0.1 1,122,410 - +0.8 1,122,410 - +0.9 1,122,410 - -1.8 1,122,525 + -0.5 1,122,525 + -0.3 1,122,525 + +1.9 1,122,526 - -1.3 1,122,526 - +0.9 1,122,526 - -0.5 1,122,612 + MPMX19_03683 0.11 +1.1 1,122,612 + MPMX19_03683 0.11 +0.5 1,122,612 + MPMX19_03683 0.11 -0.6 1,122,612 + MPMX19_03683 0.11 -0.5 1,122,612 + MPMX19_03683 0.11 +1.1 1,122,613 - MPMX19_03683 0.11 +0.5 1,122,613 - MPMX19_03683 0.11 +0.1 1,122,613 - MPMX19_03683 0.11 +0.8 1,122,613 - MPMX19_03683 0.11 -0.8 1,122,613 - MPMX19_03683 0.11 +1.5 1,122,794 + MPMX19_03683 0.21 +0.6 1,122,794 + MPMX19_03683 0.21 +0.3 1,122,795 - MPMX19_03683 0.21 -0.5 1,122,795 - MPMX19_03683 0.21 -0.1 1,122,795 - MPMX19_03683 0.21 -1.3 1,122,795 - MPMX19_03683 0.21 +0.1 1,122,795 - MPMX19_03683 0.21 -1.4 1,122,795 - MPMX19_03683 0.21 +0.1 1,122,795 - MPMX19_03683 0.21 -0.1 1,122,795 - MPMX19_03683 0.21 +1.2 1,122,795 - MPMX19_03683 0.21 -0.9 1,122,795 - MPMX19_03683 0.21 +0.7 1,122,795 - MPMX19_03683 0.21 +0.4 1,123,032 + MPMX19_03683 0.33 -1.2 1,123,032 + MPMX19_03683 0.33 +0.4 1,123,032 + MPMX19_03683 0.33 +1.2 1,123,033 - MPMX19_03683 0.33 +0.1 1,123,033 - MPMX19_03683 0.33 +0.8 1,123,386 + MPMX19_03683 0.51 +0.5 1,123,386 + MPMX19_03683 0.51 -0.4 1,123,386 + MPMX19_03683 0.51 -0.1 1,123,386 + MPMX19_03683 0.51 -0.6 1,123,386 + MPMX19_03683 0.51 -1.0 1,123,386 + MPMX19_03683 0.51 -1.4 1,123,386 + MPMX19_03683 0.51 +0.1 1,123,386 + MPMX19_03683 0.51 +0.5 1,123,386 + MPMX19_03683 0.51 -0.1 1,123,386 + MPMX19_03683 0.51 +1.9 1,123,387 - MPMX19_03683 0.51 +0.4 1,123,387 - MPMX19_03683 0.51 +0.2 1,123,387 - MPMX19_03683 0.51 -0.2 1,123,387 - MPMX19_03683 0.51 -0.1 1,123,387 - MPMX19_03683 0.51 -0.0 1,123,387 - MPMX19_03683 0.51 +0.1 1,123,387 - MPMX19_03683 0.51 +0.9 1,123,387 - MPMX19_03683 0.51 +0.9 1,123,387 - MPMX19_03683 0.51 +0.5 1,123,387 - MPMX19_03683 0.51 -0.4 1,123,387 - MPMX19_03683 0.51 +1.2 1,123,587 + MPMX19_03683 0.62 +0.5 1,123,587 + MPMX19_03683 0.62 -0.9 1,123,587 + MPMX19_03683 0.62 +0.5 1,123,587 + MPMX19_03683 0.62 -2.1 1,123,588 - MPMX19_03683 0.62 +0.9 1,123,588 - MPMX19_03683 0.62 -0.6 1,123,588 - MPMX19_03683 0.62 -0.2 1,123,588 - MPMX19_03683 0.62 -1.0 1,123,588 - MPMX19_03683 0.62 -0.6 1,123,589 + MPMX19_03683 0.62 -1.5 1,123,589 + MPMX19_03683 0.62 -1.2 1,123,590 - MPMX19_03683 0.62 +0.4 1,123,590 - MPMX19_03683 0.62 +0.4 1,123,590 - MPMX19_03683 0.62 +0.4 1,123,590 - MPMX19_03683 0.62 +0.6 1,123,590 - MPMX19_03683 0.62 -0.7 1,123,590 - MPMX19_03683 0.62 -0.6 1,123,590 - MPMX19_03683 0.62 +0.9 1,123,590 - MPMX19_03683 0.62 +0.2 1,123,590 - MPMX19_03683 0.62 +0.4 1,123,590 - MPMX19_03683 0.62 -0.1 1,123,674 + MPMX19_03683 0.66 -0.4 1,123,674 + MPMX19_03683 0.66 -1.0 1,123,674 + MPMX19_03683 0.66 -2.1 1,123,675 - MPMX19_03683 0.66 +0.5 1,123,675 - MPMX19_03683 0.66 -0.3 1,123,675 - MPMX19_03683 0.66 +0.1 1,123,675 - MPMX19_03683 0.66 -0.9 1,123,675 - MPMX19_03683 0.66 -0.2 1,123,773 + MPMX19_03683 0.71 -0.9 1,123,935 + MPMX19_03683 0.80 +0.6 1,123,935 + MPMX19_03683 0.80 +2.2 1,123,935 + MPMX19_03683 0.80 -0.6 1,123,935 + MPMX19_03683 0.80 +0.4 1,123,935 + MPMX19_03683 0.80 -0.1 1,123,935 + MPMX19_03683 0.80 -0.5 1,123,936 - MPMX19_03683 0.80 +0.8 1,123,936 - MPMX19_03683 0.80 +1.4 1,123,936 - MPMX19_03683 0.80 +0.1 1,124,070 + MPMX19_03683 0.87 +0.1 1,124,070 + MPMX19_03683 0.87 -0.2 1,124,070 + MPMX19_03683 0.87 -0.2 1,124,070 + MPMX19_03683 0.87 -0.5 1,124,070 + MPMX19_03683 0.87 +0.7 1,124,071 - MPMX19_03683 0.87 -0.8 1,124,071 - MPMX19_03683 0.87 +1.2 1,124,071 - MPMX19_03683 0.87 +0.4 1,124,071 - MPMX19_03683 0.87 +0.6 1,124,071 - MPMX19_03683 0.87 -0.4 1,124,071 - MPMX19_03683 0.87 +1.2 1,124,071 - MPMX19_03683 0.87 -0.1 1,124,071 - MPMX19_03683 0.87 +0.3 1,124,071 - MPMX19_03683 0.87 -0.1 1,124,256 + -0.9 1,124,256 + +1.5 1,124,256 + -1.2 1,124,256 + -1.1 1,124,256 + -0.6 1,124,256 + -1.5 1,124,256 + +0.0 1,124,256 + -0.9 1,124,257 - -0.1 1,124,257 - +0.7 1,124,257 - -0.6 1,124,257 - -0.6 1,124,274 + +1.5 1,124,275 - -1.1 1,124,275 - -0.0
Or see this region's nucleotide sequence