Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03604 and MPMX19_03605 are separated by 58 nucleotides MPMX19_03605 and MPMX19_03606 are separated by 291 nucleotides
MPMX19_03604: MPMX19_03604 - hypothetical protein, at 1,033,411 to 1,034,724
_03604
MPMX19_03605: MPMX19_03605 - Vitamin B12 import ATP-binding protein BtuD, at 1,034,783 to 1,035,787
_03605
MPMX19_03606: MPMX19_03606 - hypothetical protein, at 1,036,079 to 1,036,834
_03606
Position (kb)
1034
1035
1036 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1033.802 kb on + strand, within MPMX19_03604 at 1033.802 kb on + strand, within MPMX19_03604 at 1033.803 kb on - strand, within MPMX19_03604 at 1033.803 kb on - strand, within MPMX19_03604 at 1033.803 kb on - strand, within MPMX19_03604 at 1034.006 kb on + strand, within MPMX19_03604 at 1034.006 kb on + strand, within MPMX19_03604 at 1034.007 kb on - strand, within MPMX19_03604 at 1034.007 kb on - strand, within MPMX19_03604 at 1034.174 kb on + strand, within MPMX19_03604 at 1034.174 kb on + strand, within MPMX19_03604 at 1034.174 kb on + strand, within MPMX19_03604 at 1034.174 kb on + strand, within MPMX19_03604 at 1034.174 kb on + strand, within MPMX19_03604 at 1034.174 kb on + strand, within MPMX19_03604 at 1034.174 kb on + strand, within MPMX19_03604 at 1034.174 kb on + strand, within MPMX19_03604 at 1034.174 kb on + strand, within MPMX19_03604 at 1034.175 kb on - strand, within MPMX19_03604 at 1034.175 kb on - strand, within MPMX19_03604 at 1034.175 kb on - strand, within MPMX19_03604 at 1034.175 kb on - strand, within MPMX19_03604 at 1034.175 kb on - strand, within MPMX19_03604 at 1034.175 kb on - strand, within MPMX19_03604 at 1034.175 kb on - strand, within MPMX19_03604 at 1034.402 kb on + strand, within MPMX19_03604 at 1034.402 kb on + strand, within MPMX19_03604 at 1034.403 kb on - strand, within MPMX19_03604 at 1034.403 kb on - strand, within MPMX19_03604 at 1034.423 kb on + strand, within MPMX19_03604 at 1034.423 kb on + strand, within MPMX19_03604 at 1034.423 kb on + strand, within MPMX19_03604 at 1034.423 kb on + strand, within MPMX19_03604 at 1034.424 kb on - strand, within MPMX19_03604 at 1034.424 kb on - strand, within MPMX19_03604 at 1034.424 kb on - strand, within MPMX19_03604 at 1034.709 kb on + strand at 1034.709 kb on + strand at 1034.709 kb on + strand at 1034.710 kb on - strand at 1034.862 kb on + strand at 1034.940 kb on + strand, within MPMX19_03605 at 1034.940 kb on + strand, within MPMX19_03605 at 1034.940 kb on + strand, within MPMX19_03605 at 1034.941 kb on - strand, within MPMX19_03605 at 1034.941 kb on - strand, within MPMX19_03605 at 1034.941 kb on - strand, within MPMX19_03605 at 1035.402 kb on + strand, within MPMX19_03605 at 1035.402 kb on + strand, within MPMX19_03605 at 1035.402 kb on + strand, within MPMX19_03605 at 1035.402 kb on + strand, within MPMX19_03605 at 1035.402 kb on + strand, within MPMX19_03605 at 1035.402 kb on + strand, within MPMX19_03605 at 1035.402 kb on + strand, within MPMX19_03605 at 1035.403 kb on - strand, within MPMX19_03605 at 1035.403 kb on - strand, within MPMX19_03605 at 1035.528 kb on + strand, within MPMX19_03605 at 1035.528 kb on + strand, within MPMX19_03605 at 1035.529 kb on - strand, within MPMX19_03605 at 1035.529 kb on - strand, within MPMX19_03605 at 1035.529 kb on - strand, within MPMX19_03605 at 1035.529 kb on - strand, within MPMX19_03605 at 1035.529 kb on - strand, within MPMX19_03605 at 1035.529 kb on - strand, within MPMX19_03605 at 1035.529 kb on - strand, within MPMX19_03605 at 1035.529 kb on - strand, within MPMX19_03605 at 1035.687 kb on + strand at 1035.687 kb on + strand at 1035.687 kb on + strand at 1035.687 kb on + strand at 1035.687 kb on + strand at 1035.687 kb on + strand at 1035.687 kb on + strand at 1035.687 kb on + strand at 1035.688 kb on - strand at 1035.688 kb on - strand at 1035.688 kb on - strand at 1035.688 kb on - strand at 1035.688 kb on - strand at 1035.688 kb on - strand at 1035.688 kb on - strand at 1035.688 kb on - strand at 1035.688 kb on - strand at 1035.713 kb on + strand at 1035.713 kb on + strand at 1035.713 kb on + strand at 1035.713 kb on + strand at 1035.713 kb on + strand at 1035.714 kb on - strand at 1035.714 kb on - strand at 1035.714 kb on - strand at 1035.714 kb on - strand at 1035.714 kb on - strand at 1035.714 kb on - strand at 1035.741 kb on + strand at 1035.954 kb on + strand at 1035.954 kb on + strand at 1035.954 kb on + strand at 1035.954 kb on + strand at 1035.955 kb on - strand at 1035.955 kb on - strand at 1035.955 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,033,802 + MPMX19_03604 0.30 -2.2 1,033,802 + MPMX19_03604 0.30 -0.1 1,033,803 - MPMX19_03604 0.30 +0.4 1,033,803 - MPMX19_03604 0.30 -0.5 1,033,803 - MPMX19_03604 0.30 -1.4 1,034,006 + MPMX19_03604 0.45 +1.5 1,034,006 + MPMX19_03604 0.45 -0.4 1,034,007 - MPMX19_03604 0.45 +0.7 1,034,007 - MPMX19_03604 0.45 +0.1 1,034,174 + MPMX19_03604 0.58 -1.6 1,034,174 + MPMX19_03604 0.58 +0.1 1,034,174 + MPMX19_03604 0.58 -1.6 1,034,174 + MPMX19_03604 0.58 -0.2 1,034,174 + MPMX19_03604 0.58 -0.3 1,034,174 + MPMX19_03604 0.58 +1.5 1,034,174 + MPMX19_03604 0.58 +1.4 1,034,174 + MPMX19_03604 0.58 -0.8 1,034,174 + MPMX19_03604 0.58 -0.1 1,034,175 - MPMX19_03604 0.58 -0.2 1,034,175 - MPMX19_03604 0.58 -1.1 1,034,175 - MPMX19_03604 0.58 +0.4 1,034,175 - MPMX19_03604 0.58 -0.4 1,034,175 - MPMX19_03604 0.58 -0.4 1,034,175 - MPMX19_03604 0.58 -0.8 1,034,175 - MPMX19_03604 0.58 +0.1 1,034,402 + MPMX19_03604 0.75 -1.2 1,034,402 + MPMX19_03604 0.75 -2.2 1,034,403 - MPMX19_03604 0.75 +1.5 1,034,403 - MPMX19_03604 0.75 +2.4 1,034,423 + MPMX19_03604 0.77 -0.9 1,034,423 + MPMX19_03604 0.77 -0.4 1,034,423 + MPMX19_03604 0.77 -0.4 1,034,423 + MPMX19_03604 0.77 +0.6 1,034,424 - MPMX19_03604 0.77 +0.2 1,034,424 - MPMX19_03604 0.77 +0.5 1,034,424 - MPMX19_03604 0.77 +0.1 1,034,709 + -1.2 1,034,709 + +0.3 1,034,709 + +1.7 1,034,710 - -0.1 1,034,862 + -0.8 1,034,940 + MPMX19_03605 0.16 -2.0 1,034,940 + MPMX19_03605 0.16 +0.5 1,034,940 + MPMX19_03605 0.16 +0.2 1,034,941 - MPMX19_03605 0.16 -1.0 1,034,941 - MPMX19_03605 0.16 -0.3 1,034,941 - MPMX19_03605 0.16 -1.8 1,035,402 + MPMX19_03605 0.62 -1.0 1,035,402 + MPMX19_03605 0.62 -1.2 1,035,402 + MPMX19_03605 0.62 -0.7 1,035,402 + MPMX19_03605 0.62 -1.1 1,035,402 + MPMX19_03605 0.62 -0.1 1,035,402 + MPMX19_03605 0.62 -1.5 1,035,402 + MPMX19_03605 0.62 -2.0 1,035,403 - MPMX19_03605 0.62 -0.4 1,035,403 - MPMX19_03605 0.62 -0.5 1,035,528 + MPMX19_03605 0.74 +0.8 1,035,528 + MPMX19_03605 0.74 -1.1 1,035,529 - MPMX19_03605 0.74 +0.7 1,035,529 - MPMX19_03605 0.74 -0.6 1,035,529 - MPMX19_03605 0.74 +0.5 1,035,529 - MPMX19_03605 0.74 -0.9 1,035,529 - MPMX19_03605 0.74 +0.4 1,035,529 - MPMX19_03605 0.74 -0.2 1,035,529 - MPMX19_03605 0.74 +0.0 1,035,529 - MPMX19_03605 0.74 -0.7 1,035,687 + -0.2 1,035,687 + +0.4 1,035,687 + -1.3 1,035,687 + -0.5 1,035,687 + -0.0 1,035,687 + -0.1 1,035,687 + -0.9 1,035,687 + -0.5 1,035,688 - +0.0 1,035,688 - +0.6 1,035,688 - -0.2 1,035,688 - +0.3 1,035,688 - -0.2 1,035,688 - +1.1 1,035,688 - +0.5 1,035,688 - +0.3 1,035,688 - +0.8 1,035,713 + -0.1 1,035,713 + -0.9 1,035,713 + +1.9 1,035,713 + -0.9 1,035,713 + +1.9 1,035,714 - +0.2 1,035,714 - -0.1 1,035,714 - -0.4 1,035,714 - -0.5 1,035,714 - +0.5 1,035,714 - -0.4 1,035,741 + +1.6 1,035,954 + -0.4 1,035,954 + -0.1 1,035,954 + -0.1 1,035,954 + +0.1 1,035,955 - +0.1 1,035,955 - +0.5 1,035,955 - -0.7
Or see this region's nucleotide sequence