Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03544 and MPMX19_03545 overlap by 1 nucleotides MPMX19_03545 and MPMX19_03546 are separated by 107 nucleotides
MPMX19_03544: MPMX19_03544 - N-formyl-4-amino-5-aminomethyl-2- methylpyrimidine deformylase, at 964,220 to 965,431
_03544
MPMX19_03545: MPMX19_03545 - Ectoine hydrolase, at 965,431 to 966,570
_03545
MPMX19_03546: MPMX19_03546 - Succinyl-diaminopimelate desuccinylase, at 966,678 to 968,225
_03546
Position (kb) 965
966
967 Strain fitness (log2 ratio) -2
-1
0
1
2 at 964.538 kb on + strand, within MPMX19_03544 at 964.538 kb on + strand, within MPMX19_03544 at 964.538 kb on + strand, within MPMX19_03544 at 964.538 kb on + strand, within MPMX19_03544 at 964.538 kb on + strand, within MPMX19_03544 at 964.539 kb on - strand, within MPMX19_03544 at 964.539 kb on - strand, within MPMX19_03544 at 964.539 kb on - strand, within MPMX19_03544 at 964.539 kb on - strand, within MPMX19_03544 at 964.539 kb on - strand, within MPMX19_03544 at 964.539 kb on - strand, within MPMX19_03544 at 964.539 kb on - strand, within MPMX19_03544 at 964.539 kb on - strand, within MPMX19_03544 at 964.580 kb on + strand, within MPMX19_03544 at 964.580 kb on + strand, within MPMX19_03544 at 964.646 kb on + strand, within MPMX19_03544 at 964.646 kb on + strand, within MPMX19_03544 at 964.646 kb on + strand, within MPMX19_03544 at 964.646 kb on + strand, within MPMX19_03544 at 964.646 kb on + strand, within MPMX19_03544 at 964.646 kb on + strand, within MPMX19_03544 at 964.646 kb on + strand, within MPMX19_03544 at 964.646 kb on + strand, within MPMX19_03544 at 964.646 kb on + strand, within MPMX19_03544 at 964.646 kb on + strand, within MPMX19_03544 at 964.647 kb on - strand, within MPMX19_03544 at 964.647 kb on - strand, within MPMX19_03544 at 964.647 kb on - strand, within MPMX19_03544 at 964.647 kb on - strand, within MPMX19_03544 at 964.647 kb on - strand, within MPMX19_03544 at 964.647 kb on - strand, within MPMX19_03544 at 964.647 kb on - strand, within MPMX19_03544 at 964.647 kb on - strand, within MPMX19_03544 at 964.647 kb on - strand, within MPMX19_03544 at 964.647 kb on - strand, within MPMX19_03544 at 964.647 kb on - strand, within MPMX19_03544 at 964.647 kb on - strand, within MPMX19_03544 at 965.027 kb on + strand, within MPMX19_03544 at 965.211 kb on - strand, within MPMX19_03544 at 965.267 kb on + strand, within MPMX19_03544 at 965.267 kb on + strand, within MPMX19_03544 at 965.267 kb on + strand, within MPMX19_03544 at 965.267 kb on + strand, within MPMX19_03544 at 965.267 kb on + strand, within MPMX19_03544 at 965.268 kb on - strand, within MPMX19_03544 at 965.268 kb on - strand, within MPMX19_03544 at 965.268 kb on - strand, within MPMX19_03544 at 965.339 kb on + strand at 965.339 kb on + strand at 965.339 kb on + strand at 965.339 kb on + strand at 965.339 kb on + strand at 965.378 kb on + strand at 965.379 kb on - strand at 965.379 kb on - strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.399 kb on + strand at 965.400 kb on - strand at 965.400 kb on - strand at 965.400 kb on - strand at 965.400 kb on - strand at 965.400 kb on - strand at 965.400 kb on - strand at 965.555 kb on - strand, within MPMX19_03545 at 965.555 kb on - strand, within MPMX19_03545 at 965.773 kb on + strand, within MPMX19_03545 at 965.773 kb on + strand, within MPMX19_03545 at 965.773 kb on + strand, within MPMX19_03545 at 965.773 kb on + strand, within MPMX19_03545 at 965.773 kb on + strand, within MPMX19_03545 at 965.774 kb on - strand, within MPMX19_03545 at 966.163 kb on + strand, within MPMX19_03545 at 966.163 kb on + strand, within MPMX19_03545 at 966.164 kb on - strand, within MPMX19_03545 at 966.164 kb on - strand, within MPMX19_03545 at 966.346 kb on + strand, within MPMX19_03545 at 966.364 kb on + strand, within MPMX19_03545 at 966.364 kb on + strand, within MPMX19_03545 at 966.379 kb on + strand, within MPMX19_03545 at 966.380 kb on - strand, within MPMX19_03545 at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.469 kb on + strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.470 kb on - strand at 966.625 kb on + strand at 966.626 kb on - strand at 966.723 kb on + strand at 966.754 kb on + strand at 966.754 kb on + strand at 966.754 kb on + strand at 966.754 kb on + strand at 966.754 kb on + strand at 966.754 kb on + strand at 966.755 kb on - strand at 966.755 kb on - strand at 966.880 kb on + strand, within MPMX19_03546 at 966.880 kb on + strand, within MPMX19_03546 at 966.880 kb on + strand, within MPMX19_03546 at 966.881 kb on - strand, within MPMX19_03546 at 966.881 kb on - strand, within MPMX19_03546 at 966.881 kb on - strand, within MPMX19_03546 at 966.881 kb on - strand, within MPMX19_03546 at 966.881 kb on - strand, within MPMX19_03546 at 966.881 kb on - strand, within MPMX19_03546 at 966.994 kb on + strand, within MPMX19_03546 at 966.994 kb on + strand, within MPMX19_03546 at 966.994 kb on + strand, within MPMX19_03546 at 966.995 kb on - strand, within MPMX19_03546 at 966.995 kb on - strand, within MPMX19_03546 at 966.995 kb on - strand, within MPMX19_03546 at 966.995 kb on - strand, within MPMX19_03546 at 966.995 kb on - strand, within MPMX19_03546 at 966.995 kb on - strand, within MPMX19_03546 at 966.995 kb on - strand, within MPMX19_03546 at 967.039 kb on + strand, within MPMX19_03546 at 967.040 kb on - strand, within MPMX19_03546 at 967.040 kb on - strand, within MPMX19_03546 at 967.222 kb on + strand, within MPMX19_03546 at 967.222 kb on + strand, within MPMX19_03546 at 967.222 kb on + strand, within MPMX19_03546 at 967.222 kb on + strand, within MPMX19_03546 at 967.222 kb on + strand, within MPMX19_03546 at 967.222 kb on + strand, within MPMX19_03546 at 967.222 kb on + strand, within MPMX19_03546 at 967.223 kb on - strand, within MPMX19_03546 at 967.223 kb on - strand, within MPMX19_03546 at 967.223 kb on - strand, within MPMX19_03546 at 967.339 kb on + strand, within MPMX19_03546 at 967.340 kb on - strand, within MPMX19_03546 at 967.340 kb on - strand, within MPMX19_03546 at 967.340 kb on - strand, within MPMX19_03546 at 967.340 kb on - strand, within MPMX19_03546 at 967.340 kb on - strand, within MPMX19_03546 at 967.340 kb on - strand, within MPMX19_03546 at 967.342 kb on + strand, within MPMX19_03546 at 967.343 kb on - strand, within MPMX19_03546 at 967.343 kb on - strand, within MPMX19_03546 at 967.423 kb on + strand, within MPMX19_03546 at 967.423 kb on + strand, within MPMX19_03546 at 967.423 kb on + strand, within MPMX19_03546 at 967.423 kb on + strand, within MPMX19_03546 at 967.423 kb on + strand, within MPMX19_03546 at 967.423 kb on + strand, within MPMX19_03546 at 967.423 kb on + strand, within MPMX19_03546 at 967.423 kb on + strand, within MPMX19_03546 at 967.424 kb on - strand, within MPMX19_03546
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 964,538 + MPMX19_03544 0.26 -0.6 964,538 + MPMX19_03544 0.26 -1.2 964,538 + MPMX19_03544 0.26 +0.9 964,538 + MPMX19_03544 0.26 -0.1 964,538 + MPMX19_03544 0.26 -2.2 964,539 - MPMX19_03544 0.26 -0.2 964,539 - MPMX19_03544 0.26 -1.1 964,539 - MPMX19_03544 0.26 +1.2 964,539 - MPMX19_03544 0.26 +0.6 964,539 - MPMX19_03544 0.26 +0.3 964,539 - MPMX19_03544 0.26 +0.2 964,539 - MPMX19_03544 0.26 -1.8 964,539 - MPMX19_03544 0.26 -1.1 964,580 + MPMX19_03544 0.30 -0.5 964,580 + MPMX19_03544 0.30 -0.4 964,646 + MPMX19_03544 0.35 -0.4 964,646 + MPMX19_03544 0.35 -2.0 964,646 + MPMX19_03544 0.35 -2.7 964,646 + MPMX19_03544 0.35 -0.1 964,646 + MPMX19_03544 0.35 -0.7 964,646 + MPMX19_03544 0.35 -1.1 964,646 + MPMX19_03544 0.35 +0.1 964,646 + MPMX19_03544 0.35 +1.0 964,646 + MPMX19_03544 0.35 +0.8 964,646 + MPMX19_03544 0.35 -0.9 964,647 - MPMX19_03544 0.35 +0.3 964,647 - MPMX19_03544 0.35 -1.1 964,647 - MPMX19_03544 0.35 -0.4 964,647 - MPMX19_03544 0.35 +0.5 964,647 - MPMX19_03544 0.35 +1.9 964,647 - MPMX19_03544 0.35 -0.0 964,647 - MPMX19_03544 0.35 +0.3 964,647 - MPMX19_03544 0.35 -1.0 964,647 - MPMX19_03544 0.35 -1.2 964,647 - MPMX19_03544 0.35 +0.5 964,647 - MPMX19_03544 0.35 -0.4 964,647 - MPMX19_03544 0.35 -2.0 965,027 + MPMX19_03544 0.67 +0.1 965,211 - MPMX19_03544 0.82 -1.4 965,267 + MPMX19_03544 0.86 +0.6 965,267 + MPMX19_03544 0.86 +0.1 965,267 + MPMX19_03544 0.86 -0.5 965,267 + MPMX19_03544 0.86 -0.1 965,267 + MPMX19_03544 0.86 -0.3 965,268 - MPMX19_03544 0.86 -0.1 965,268 - MPMX19_03544 0.86 -1.2 965,268 - MPMX19_03544 0.86 +0.1 965,339 + -1.4 965,339 + -1.7 965,339 + +0.8 965,339 + -0.8 965,339 + +0.9 965,378 + +0.2 965,379 - +0.5 965,379 - +0.6 965,399 + -2.3 965,399 + +0.5 965,399 + -0.1 965,399 + +0.3 965,399 + +0.8 965,399 + +0.3 965,399 + -0.4 965,399 + -0.9 965,399 + -0.1 965,399 + -0.9 965,399 + -0.1 965,399 + +0.6 965,399 + -0.2 965,399 + +0.9 965,399 + -0.1 965,400 - -0.2 965,400 - -1.7 965,400 - -0.7 965,400 - -1.0 965,400 - -0.5 965,400 - +0.1 965,555 - MPMX19_03545 0.11 -0.5 965,555 - MPMX19_03545 0.11 -0.9 965,773 + MPMX19_03545 0.30 -1.1 965,773 + MPMX19_03545 0.30 +0.3 965,773 + MPMX19_03545 0.30 +0.8 965,773 + MPMX19_03545 0.30 -0.2 965,773 + MPMX19_03545 0.30 +1.3 965,774 - MPMX19_03545 0.30 +1.3 966,163 + MPMX19_03545 0.64 -0.9 966,163 + MPMX19_03545 0.64 +0.0 966,164 - MPMX19_03545 0.64 +0.6 966,164 - MPMX19_03545 0.64 -0.5 966,346 + MPMX19_03545 0.80 +1.3 966,364 + MPMX19_03545 0.82 +0.9 966,364 + MPMX19_03545 0.82 -0.9 966,379 + MPMX19_03545 0.83 -0.9 966,380 - MPMX19_03545 0.83 +0.7 966,469 + +1.3 966,469 + -0.6 966,469 + -0.2 966,469 + -0.9 966,469 + -1.7 966,469 + +0.6 966,469 + +0.3 966,469 + +0.9 966,469 + -0.3 966,469 + +1.9 966,469 + -1.2 966,469 + -2.5 966,469 + -0.2 966,469 + +0.1 966,469 + -0.7 966,469 + +0.7 966,469 + -0.2 966,469 + +0.1 966,469 + -0.9 966,470 - -0.5 966,470 - +0.3 966,470 - -0.1 966,470 - +0.5 966,470 - -0.8 966,470 - -0.8 966,470 - +0.3 966,470 - -0.4 966,470 - -1.2 966,470 - +0.5 966,470 - -1.3 966,470 - -0.1 966,470 - -0.2 966,470 - -0.9 966,470 - -0.4 966,470 - -0.5 966,470 - +0.6 966,470 - -0.9 966,470 - +0.2 966,470 - -1.4 966,625 + +0.5 966,626 - -0.8 966,723 + +0.3 966,754 + +0.3 966,754 + -0.8 966,754 + -1.0 966,754 + -0.3 966,754 + -0.6 966,754 + -1.2 966,755 - -0.2 966,755 - -1.1 966,880 + MPMX19_03546 0.13 -1.3 966,880 + MPMX19_03546 0.13 -0.7 966,880 + MPMX19_03546 0.13 -0.7 966,881 - MPMX19_03546 0.13 -2.4 966,881 - MPMX19_03546 0.13 -0.9 966,881 - MPMX19_03546 0.13 -1.2 966,881 - MPMX19_03546 0.13 -0.7 966,881 - MPMX19_03546 0.13 +0.2 966,881 - MPMX19_03546 0.13 +0.2 966,994 + MPMX19_03546 0.20 +0.7 966,994 + MPMX19_03546 0.20 -2.4 966,994 + MPMX19_03546 0.20 +1.9 966,995 - MPMX19_03546 0.20 -0.1 966,995 - MPMX19_03546 0.20 -1.2 966,995 - MPMX19_03546 0.20 -0.8 966,995 - MPMX19_03546 0.20 +0.9 966,995 - MPMX19_03546 0.20 -1.7 966,995 - MPMX19_03546 0.20 +0.2 966,995 - MPMX19_03546 0.20 -0.7 967,039 + MPMX19_03546 0.23 -0.9 967,040 - MPMX19_03546 0.23 -0.2 967,040 - MPMX19_03546 0.23 +0.3 967,222 + MPMX19_03546 0.35 -1.2 967,222 + MPMX19_03546 0.35 +0.7 967,222 + MPMX19_03546 0.35 -0.2 967,222 + MPMX19_03546 0.35 -0.8 967,222 + MPMX19_03546 0.35 +1.9 967,222 + MPMX19_03546 0.35 -0.1 967,222 + MPMX19_03546 0.35 +0.1 967,223 - MPMX19_03546 0.35 -1.5 967,223 - MPMX19_03546 0.35 -0.8 967,223 - MPMX19_03546 0.35 -1.6 967,339 + MPMX19_03546 0.43 +0.2 967,340 - MPMX19_03546 0.43 -0.3 967,340 - MPMX19_03546 0.43 -0.1 967,340 - MPMX19_03546 0.43 +1.7 967,340 - MPMX19_03546 0.43 -1.3 967,340 - MPMX19_03546 0.43 -1.5 967,340 - MPMX19_03546 0.43 -0.8 967,342 + MPMX19_03546 0.43 +0.2 967,343 - MPMX19_03546 0.43 -1.1 967,343 - MPMX19_03546 0.43 -0.4 967,423 + MPMX19_03546 0.48 +0.2 967,423 + MPMX19_03546 0.48 -0.9 967,423 + MPMX19_03546 0.48 -0.3 967,423 + MPMX19_03546 0.48 +0.7 967,423 + MPMX19_03546 0.48 -0.6 967,423 + MPMX19_03546 0.48 +0.6 967,423 + MPMX19_03546 0.48 +0.3 967,423 + MPMX19_03546 0.48 -0.5 967,424 - MPMX19_03546 0.48 -1.0
Or see this region's nucleotide sequence