Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03490 and MPMX19_03491 are separated by 64 nucleotides MPMX19_03491 and MPMX19_03492 are separated by 289 nucleotides
MPMX19_03490: MPMX19_03490 - hypothetical protein, at 903,336 to 904,418
_03490
MPMX19_03491: MPMX19_03491 - putative FAD-linked oxidoreductase, at 904,483 to 905,904
_03491
MPMX19_03492: MPMX19_03492 - 3'-5' exonuclease DinG, at 906,194 to 907,132
_03492
Position (kb)
904
905
906 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 903.511 kb on + strand, within MPMX19_03490 at 903.511 kb on + strand, within MPMX19_03490 at 903.511 kb on + strand, within MPMX19_03490 at 903.512 kb on - strand, within MPMX19_03490 at 903.512 kb on - strand, within MPMX19_03490 at 903.817 kb on + strand, within MPMX19_03490 at 903.817 kb on + strand, within MPMX19_03490 at 903.818 kb on - strand, within MPMX19_03490 at 903.818 kb on - strand, within MPMX19_03490 at 903.818 kb on - strand, within MPMX19_03490 at 903.818 kb on - strand, within MPMX19_03490 at 903.919 kb on + strand, within MPMX19_03490 at 903.919 kb on + strand, within MPMX19_03490 at 903.919 kb on + strand, within MPMX19_03490 at 903.919 kb on + strand, within MPMX19_03490 at 903.919 kb on + strand, within MPMX19_03490 at 903.920 kb on - strand, within MPMX19_03490 at 903.920 kb on - strand, within MPMX19_03490 at 903.973 kb on + strand, within MPMX19_03490 at 903.991 kb on + strand, within MPMX19_03490 at 903.991 kb on + strand, within MPMX19_03490 at 903.991 kb on + strand, within MPMX19_03490 at 903.992 kb on - strand, within MPMX19_03490 at 904.012 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.024 kb on + strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.025 kb on - strand, within MPMX19_03490 at 904.147 kb on + strand, within MPMX19_03490 at 904.147 kb on + strand, within MPMX19_03490 at 904.147 kb on + strand, within MPMX19_03490 at 904.147 kb on + strand, within MPMX19_03490 at 904.147 kb on + strand, within MPMX19_03490 at 904.147 kb on + strand, within MPMX19_03490 at 904.148 kb on - strand, within MPMX19_03490 at 904.246 kb on + strand, within MPMX19_03490 at 904.246 kb on + strand, within MPMX19_03490 at 904.246 kb on + strand, within MPMX19_03490 at 904.246 kb on + strand, within MPMX19_03490 at 904.246 kb on + strand, within MPMX19_03490 at 904.246 kb on + strand, within MPMX19_03490 at 904.246 kb on + strand, within MPMX19_03490 at 904.246 kb on + strand, within MPMX19_03490 at 904.246 kb on + strand, within MPMX19_03490 at 904.247 kb on - strand, within MPMX19_03490 at 904.247 kb on - strand, within MPMX19_03490 at 904.247 kb on - strand, within MPMX19_03490 at 904.261 kb on + strand, within MPMX19_03490 at 904.261 kb on + strand, within MPMX19_03490 at 904.261 kb on + strand, within MPMX19_03490 at 904.261 kb on + strand, within MPMX19_03490 at 904.262 kb on - strand, within MPMX19_03490 at 904.262 kb on - strand, within MPMX19_03490 at 904.273 kb on + strand, within MPMX19_03490 at 904.273 kb on + strand, within MPMX19_03490 at 904.273 kb on + strand, within MPMX19_03490 at 904.273 kb on + strand, within MPMX19_03490 at 904.273 kb on + strand, within MPMX19_03490 at 904.274 kb on - strand, within MPMX19_03490 at 904.274 kb on - strand, within MPMX19_03490 at 904.274 kb on - strand, within MPMX19_03490 at 904.274 kb on - strand, within MPMX19_03490 at 904.274 kb on - strand, within MPMX19_03490 at 904.274 kb on - strand, within MPMX19_03490 at 904.274 kb on - strand, within MPMX19_03490 at 904.484 kb on + strand at 904.580 kb on + strand at 904.580 kb on + strand at 904.581 kb on - strand at 905.336 kb on + strand, within MPMX19_03491 at 905.363 kb on + strand, within MPMX19_03491 at 905.363 kb on + strand, within MPMX19_03491 at 905.519 kb on + strand, within MPMX19_03491 at 905.926 kb on + strand at 905.926 kb on + strand at 905.926 kb on + strand at 905.926 kb on + strand at 905.927 kb on - strand at 905.927 kb on - strand at 905.927 kb on - strand at 905.927 kb on - strand at 905.968 kb on + strand at 905.969 kb on - strand at 906.011 kb on + strand at 906.011 kb on + strand at 906.012 kb on - strand at 906.012 kb on - strand at 906.012 kb on - strand at 906.140 kb on + strand at 906.211 kb on + strand at 906.211 kb on + strand at 906.212 kb on - strand at 906.212 kb on - strand at 906.212 kb on - strand at 906.212 kb on - strand at 906.212 kb on - strand at 906.212 kb on - strand at 906.879 kb on - strand, within MPMX19_03492 at 906.879 kb on - strand, within MPMX19_03492 at 906.879 kb on - strand, within MPMX19_03492
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 903,511 + MPMX19_03490 0.16 -1.1 903,511 + MPMX19_03490 0.16 -0.6 903,511 + MPMX19_03490 0.16 +1.3 903,512 - MPMX19_03490 0.16 -0.2 903,512 - MPMX19_03490 0.16 -1.0 903,817 + MPMX19_03490 0.44 -1.8 903,817 + MPMX19_03490 0.44 -1.7 903,818 - MPMX19_03490 0.45 -0.3 903,818 - MPMX19_03490 0.45 +0.1 903,818 - MPMX19_03490 0.45 -2.0 903,818 - MPMX19_03490 0.45 -1.5 903,919 + MPMX19_03490 0.54 -0.7 903,919 + MPMX19_03490 0.54 -1.5 903,919 + MPMX19_03490 0.54 -1.1 903,919 + MPMX19_03490 0.54 -0.5 903,919 + MPMX19_03490 0.54 -1.2 903,920 - MPMX19_03490 0.54 -2.3 903,920 - MPMX19_03490 0.54 +0.4 903,973 + MPMX19_03490 0.59 -0.5 903,991 + MPMX19_03490 0.60 -0.5 903,991 + MPMX19_03490 0.60 +0.5 903,991 + MPMX19_03490 0.60 -0.1 903,992 - MPMX19_03490 0.61 -0.5 904,012 + MPMX19_03490 0.62 -0.4 904,024 + MPMX19_03490 0.64 -0.3 904,024 + MPMX19_03490 0.64 -0.2 904,024 + MPMX19_03490 0.64 -0.7 904,024 + MPMX19_03490 0.64 -2.2 904,024 + MPMX19_03490 0.64 -1.8 904,024 + MPMX19_03490 0.64 -0.6 904,024 + MPMX19_03490 0.64 -0.7 904,024 + MPMX19_03490 0.64 -1.2 904,024 + MPMX19_03490 0.64 -1.5 904,024 + MPMX19_03490 0.64 -0.4 904,024 + MPMX19_03490 0.64 -0.9 904,024 + MPMX19_03490 0.64 -0.4 904,024 + MPMX19_03490 0.64 -0.7 904,024 + MPMX19_03490 0.64 +0.7 904,024 + MPMX19_03490 0.64 -1.1 904,024 + MPMX19_03490 0.64 -0.1 904,024 + MPMX19_03490 0.64 -0.3 904,024 + MPMX19_03490 0.64 +0.5 904,024 + MPMX19_03490 0.64 -0.6 904,024 + MPMX19_03490 0.64 +0.0 904,024 + MPMX19_03490 0.64 -1.2 904,025 - MPMX19_03490 0.64 -1.8 904,025 - MPMX19_03490 0.64 -0.8 904,025 - MPMX19_03490 0.64 -0.2 904,025 - MPMX19_03490 0.64 -1.0 904,025 - MPMX19_03490 0.64 +0.3 904,025 - MPMX19_03490 0.64 -0.5 904,025 - MPMX19_03490 0.64 +0.4 904,025 - MPMX19_03490 0.64 -0.4 904,025 - MPMX19_03490 0.64 -0.8 904,025 - MPMX19_03490 0.64 +0.7 904,025 - MPMX19_03490 0.64 -0.4 904,025 - MPMX19_03490 0.64 -0.2 904,025 - MPMX19_03490 0.64 +0.1 904,025 - MPMX19_03490 0.64 -1.4 904,025 - MPMX19_03490 0.64 -0.5 904,025 - MPMX19_03490 0.64 +0.9 904,025 - MPMX19_03490 0.64 +0.3 904,025 - MPMX19_03490 0.64 +0.1 904,147 + MPMX19_03490 0.75 +0.3 904,147 + MPMX19_03490 0.75 +0.5 904,147 + MPMX19_03490 0.75 +0.2 904,147 + MPMX19_03490 0.75 -1.4 904,147 + MPMX19_03490 0.75 -1.2 904,147 + MPMX19_03490 0.75 -1.5 904,148 - MPMX19_03490 0.75 +0.9 904,246 + MPMX19_03490 0.84 +0.1 904,246 + MPMX19_03490 0.84 -1.3 904,246 + MPMX19_03490 0.84 -0.1 904,246 + MPMX19_03490 0.84 +0.7 904,246 + MPMX19_03490 0.84 +0.0 904,246 + MPMX19_03490 0.84 +0.1 904,246 + MPMX19_03490 0.84 +0.5 904,246 + MPMX19_03490 0.84 -0.6 904,246 + MPMX19_03490 0.84 +2.2 904,247 - MPMX19_03490 0.84 -2.0 904,247 - MPMX19_03490 0.84 -0.1 904,247 - MPMX19_03490 0.84 -0.8 904,261 + MPMX19_03490 0.85 +0.2 904,261 + MPMX19_03490 0.85 +0.7 904,261 + MPMX19_03490 0.85 +0.3 904,261 + MPMX19_03490 0.85 +1.3 904,262 - MPMX19_03490 0.86 +0.1 904,262 - MPMX19_03490 0.86 -0.4 904,273 + MPMX19_03490 0.87 +0.0 904,273 + MPMX19_03490 0.87 +0.6 904,273 + MPMX19_03490 0.87 +0.1 904,273 + MPMX19_03490 0.87 +0.5 904,273 + MPMX19_03490 0.87 -2.8 904,274 - MPMX19_03490 0.87 -0.7 904,274 - MPMX19_03490 0.87 +0.1 904,274 - MPMX19_03490 0.87 -1.2 904,274 - MPMX19_03490 0.87 +0.1 904,274 - MPMX19_03490 0.87 +0.7 904,274 - MPMX19_03490 0.87 -0.9 904,274 - MPMX19_03490 0.87 -1.2 904,484 + -0.7 904,580 + -2.2 904,580 + -2.0 904,581 - -0.1 905,336 + MPMX19_03491 0.60 -0.4 905,363 + MPMX19_03491 0.62 -0.4 905,363 + MPMX19_03491 0.62 +0.3 905,519 + MPMX19_03491 0.73 +0.1 905,926 + +0.1 905,926 + -0.1 905,926 + -1.8 905,926 + -0.2 905,927 - -0.9 905,927 - -1.7 905,927 - -0.1 905,927 - -0.2 905,968 + -1.5 905,969 - +0.8 906,011 + +0.6 906,011 + +0.1 906,012 - -0.6 906,012 - -1.5 906,012 - -2.0 906,140 + -0.4 906,211 + +0.3 906,211 + -0.7 906,212 - -0.1 906,212 - +0.6 906,212 - +0.9 906,212 - +0.0 906,212 - +0.3 906,212 - -1.4 906,879 - MPMX19_03492 0.73 -0.7 906,879 - MPMX19_03492 0.73 -0.6 906,879 - MPMX19_03492 0.73 -1.1
Or see this region's nucleotide sequence