Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03318 and MPMX19_03319 are separated by 36 nucleotides MPMX19_03319 and MPMX19_03320 are separated by 28 nucleotides
MPMX19_03318: MPMX19_03318 - hypothetical protein, at 666,429 to 667,916
_03318
MPMX19_03319: MPMX19_03319 - hypothetical protein, at 667,953 to 669,902
_03319
MPMX19_03320: MPMX19_03320 - hypothetical protein, at 669,931 to 671,307
_03320
Position (kb)
667
668
669
670 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 667.111 kb on + strand, within MPMX19_03318 at 667.111 kb on + strand, within MPMX19_03318 at 667.111 kb on + strand, within MPMX19_03318 at 667.111 kb on + strand, within MPMX19_03318 at 667.111 kb on + strand, within MPMX19_03318 at 667.111 kb on + strand, within MPMX19_03318 at 667.111 kb on + strand, within MPMX19_03318 at 667.111 kb on + strand, within MPMX19_03318 at 667.111 kb on + strand, within MPMX19_03318 at 667.112 kb on - strand, within MPMX19_03318 at 667.112 kb on - strand, within MPMX19_03318 at 667.112 kb on - strand, within MPMX19_03318 at 667.112 kb on - strand, within MPMX19_03318 at 667.123 kb on + strand, within MPMX19_03318 at 667.123 kb on + strand, within MPMX19_03318 at 667.123 kb on + strand, within MPMX19_03318 at 667.353 kb on + strand, within MPMX19_03318 at 667.353 kb on + strand, within MPMX19_03318 at 667.353 kb on + strand, within MPMX19_03318 at 667.354 kb on - strand, within MPMX19_03318 at 667.354 kb on - strand, within MPMX19_03318 at 667.354 kb on - strand, within MPMX19_03318 at 667.354 kb on - strand, within MPMX19_03318 at 667.354 kb on - strand, within MPMX19_03318 at 667.354 kb on - strand, within MPMX19_03318 at 667.450 kb on + strand, within MPMX19_03318 at 667.450 kb on + strand, within MPMX19_03318 at 667.450 kb on + strand, within MPMX19_03318 at 667.450 kb on + strand, within MPMX19_03318 at 667.451 kb on - strand, within MPMX19_03318 at 667.451 kb on - strand, within MPMX19_03318 at 667.451 kb on - strand, within MPMX19_03318 at 667.451 kb on - strand, within MPMX19_03318 at 667.708 kb on + strand, within MPMX19_03318 at 667.708 kb on + strand, within MPMX19_03318 at 667.708 kb on + strand, within MPMX19_03318 at 667.708 kb on + strand, within MPMX19_03318 at 667.708 kb on + strand, within MPMX19_03318 at 667.708 kb on + strand, within MPMX19_03318 at 667.708 kb on + strand, within MPMX19_03318 at 667.708 kb on + strand, within MPMX19_03318 at 667.709 kb on - strand, within MPMX19_03318 at 667.709 kb on - strand, within MPMX19_03318 at 667.709 kb on - strand, within MPMX19_03318 at 667.709 kb on - strand, within MPMX19_03318 at 667.709 kb on - strand, within MPMX19_03318 at 667.709 kb on - strand, within MPMX19_03318 at 667.768 kb on + strand at 667.768 kb on + strand at 667.768 kb on + strand at 667.768 kb on + strand at 667.768 kb on + strand at 667.769 kb on - strand at 667.769 kb on - strand at 667.769 kb on - strand at 667.769 kb on - strand at 667.769 kb on - strand at 667.769 kb on - strand at 667.837 kb on + strand at 667.837 kb on + strand at 667.837 kb on + strand at 667.838 kb on - strand at 667.838 kb on - strand at 667.838 kb on - strand at 667.838 kb on - strand at 667.838 kb on - strand at 667.838 kb on - strand at 667.838 kb on - strand at 668.383 kb on + strand, within MPMX19_03319 at 668.383 kb on + strand, within MPMX19_03319 at 668.383 kb on + strand, within MPMX19_03319 at 668.383 kb on + strand, within MPMX19_03319 at 668.383 kb on + strand, within MPMX19_03319 at 668.383 kb on + strand, within MPMX19_03319 at 668.383 kb on + strand, within MPMX19_03319 at 668.383 kb on + strand, within MPMX19_03319 at 668.383 kb on + strand, within MPMX19_03319 at 668.383 kb on + strand, within MPMX19_03319 at 668.383 kb on + strand, within MPMX19_03319 at 668.383 kb on + strand, within MPMX19_03319 at 668.384 kb on - strand, within MPMX19_03319 at 668.384 kb on - strand, within MPMX19_03319 at 668.384 kb on - strand, within MPMX19_03319 at 668.384 kb on - strand, within MPMX19_03319 at 668.384 kb on - strand, within MPMX19_03319 at 668.384 kb on - strand, within MPMX19_03319 at 668.384 kb on - strand, within MPMX19_03319 at 668.384 kb on - strand, within MPMX19_03319 at 668.384 kb on - strand, within MPMX19_03319 at 668.384 kb on - strand, within MPMX19_03319 at 668.384 kb on - strand, within MPMX19_03319 at 668.911 kb on + strand, within MPMX19_03319 at 668.911 kb on + strand, within MPMX19_03319 at 668.911 kb on + strand, within MPMX19_03319 at 668.911 kb on + strand, within MPMX19_03319 at 668.911 kb on + strand, within MPMX19_03319 at 668.911 kb on + strand, within MPMX19_03319 at 668.912 kb on - strand, within MPMX19_03319 at 668.912 kb on - strand, within MPMX19_03319 at 668.912 kb on - strand, within MPMX19_03319 at 668.912 kb on - strand, within MPMX19_03319 at 668.912 kb on - strand, within MPMX19_03319 at 668.912 kb on - strand, within MPMX19_03319 at 668.912 kb on - strand, within MPMX19_03319 at 668.912 kb on - strand, within MPMX19_03319 at 668.970 kb on + strand, within MPMX19_03319 at 668.971 kb on - strand, within MPMX19_03319 at 668.971 kb on - strand, within MPMX19_03319 at 669.164 kb on + strand, within MPMX19_03319 at 669.164 kb on + strand, within MPMX19_03319 at 669.164 kb on + strand, within MPMX19_03319 at 669.165 kb on - strand, within MPMX19_03319 at 669.165 kb on - strand, within MPMX19_03319 at 669.165 kb on - strand, within MPMX19_03319 at 669.165 kb on - strand, within MPMX19_03319 at 669.165 kb on - strand, within MPMX19_03319 at 669.356 kb on - strand, within MPMX19_03319 at 669.356 kb on - strand, within MPMX19_03319 at 669.356 kb on - strand, within MPMX19_03319 at 669.356 kb on - strand, within MPMX19_03319 at 669.376 kb on + strand, within MPMX19_03319 at 669.377 kb on - strand, within MPMX19_03319 at 669.377 kb on - strand, within MPMX19_03319 at 669.452 kb on - strand, within MPMX19_03319 at 669.592 kb on + strand, within MPMX19_03319 at 669.592 kb on + strand, within MPMX19_03319 at 669.592 kb on + strand, within MPMX19_03319 at 669.592 kb on + strand, within MPMX19_03319 at 669.592 kb on + strand, within MPMX19_03319 at 669.592 kb on + strand, within MPMX19_03319 at 669.593 kb on - strand, within MPMX19_03319 at 669.593 kb on - strand, within MPMX19_03319 at 669.593 kb on - strand, within MPMX19_03319 at 669.593 kb on - strand, within MPMX19_03319 at 669.593 kb on - strand, within MPMX19_03319 at 669.604 kb on + strand, within MPMX19_03319 at 669.605 kb on - strand, within MPMX19_03319 at 669.605 kb on - strand, within MPMX19_03319 at 669.605 kb on - strand, within MPMX19_03319 at 669.605 kb on - strand, within MPMX19_03319 at 669.675 kb on - strand, within MPMX19_03319 at 669.675 kb on - strand, within MPMX19_03319 at 669.675 kb on - strand, within MPMX19_03319 at 669.675 kb on - strand, within MPMX19_03319 at 669.701 kb on + strand, within MPMX19_03319 at 669.721 kb on + strand at 669.722 kb on - strand at 669.722 kb on - strand at 669.722 kb on - strand at 669.772 kb on + strand at 669.772 kb on + strand at 669.772 kb on + strand at 669.772 kb on + strand at 669.772 kb on + strand at 669.772 kb on + strand at 669.773 kb on - strand at 669.773 kb on - strand at 669.773 kb on - strand at 669.773 kb on - strand at 670.460 kb on - strand, within MPMX19_03320 at 670.872 kb on + strand, within MPMX19_03320 at 670.872 kb on + strand, within MPMX19_03320 at 670.873 kb on - strand, within MPMX19_03320 at 670.873 kb on - strand, within MPMX19_03320 at 670.873 kb on - strand, within MPMX19_03320 at 670.873 kb on - strand, within MPMX19_03320
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 667,111 + MPMX19_03318 0.46 -0.9 667,111 + MPMX19_03318 0.46 +0.3 667,111 + MPMX19_03318 0.46 -1.5 667,111 + MPMX19_03318 0.46 -0.0 667,111 + MPMX19_03318 0.46 +0.6 667,111 + MPMX19_03318 0.46 -1.5 667,111 + MPMX19_03318 0.46 +2.2 667,111 + MPMX19_03318 0.46 -1.1 667,111 + MPMX19_03318 0.46 -0.1 667,112 - MPMX19_03318 0.46 +0.7 667,112 - MPMX19_03318 0.46 +0.2 667,112 - MPMX19_03318 0.46 +0.9 667,112 - MPMX19_03318 0.46 +0.0 667,123 + MPMX19_03318 0.47 -0.2 667,123 + MPMX19_03318 0.47 -0.7 667,123 + MPMX19_03318 0.47 +0.8 667,353 + MPMX19_03318 0.62 -0.9 667,353 + MPMX19_03318 0.62 +0.0 667,353 + MPMX19_03318 0.62 +0.6 667,354 - MPMX19_03318 0.62 -0.7 667,354 - MPMX19_03318 0.62 -0.0 667,354 - MPMX19_03318 0.62 +0.9 667,354 - MPMX19_03318 0.62 -0.2 667,354 - MPMX19_03318 0.62 +0.8 667,354 - MPMX19_03318 0.62 +0.5 667,450 + MPMX19_03318 0.69 -1.4 667,450 + MPMX19_03318 0.69 -0.5 667,450 + MPMX19_03318 0.69 -0.4 667,450 + MPMX19_03318 0.69 -1.7 667,451 - MPMX19_03318 0.69 +1.1 667,451 - MPMX19_03318 0.69 +1.2 667,451 - MPMX19_03318 0.69 +0.2 667,451 - MPMX19_03318 0.69 +0.1 667,708 + MPMX19_03318 0.86 -1.1 667,708 + MPMX19_03318 0.86 -2.1 667,708 + MPMX19_03318 0.86 -0.3 667,708 + MPMX19_03318 0.86 -0.0 667,708 + MPMX19_03318 0.86 -0.1 667,708 + MPMX19_03318 0.86 -0.0 667,708 + MPMX19_03318 0.86 +0.3 667,708 + MPMX19_03318 0.86 +1.2 667,709 - MPMX19_03318 0.86 +0.7 667,709 - MPMX19_03318 0.86 +0.4 667,709 - MPMX19_03318 0.86 -0.1 667,709 - MPMX19_03318 0.86 -1.3 667,709 - MPMX19_03318 0.86 -0.3 667,709 - MPMX19_03318 0.86 +0.9 667,768 + +1.5 667,768 + +0.0 667,768 + +2.3 667,768 + +0.1 667,768 + -1.1 667,769 - -1.7 667,769 - -0.1 667,769 - -0.9 667,769 - +0.7 667,769 - -0.6 667,769 - -0.1 667,837 + -1.3 667,837 + -0.8 667,837 + +0.8 667,838 - -1.4 667,838 - -0.2 667,838 - -0.9 667,838 - -0.4 667,838 - -0.5 667,838 - +0.7 667,838 - -0.1 668,383 + MPMX19_03319 0.22 +0.2 668,383 + MPMX19_03319 0.22 -1.6 668,383 + MPMX19_03319 0.22 -0.5 668,383 + MPMX19_03319 0.22 -0.8 668,383 + MPMX19_03319 0.22 -0.2 668,383 + MPMX19_03319 0.22 +0.5 668,383 + MPMX19_03319 0.22 -0.2 668,383 + MPMX19_03319 0.22 -0.5 668,383 + MPMX19_03319 0.22 -0.1 668,383 + MPMX19_03319 0.22 -1.5 668,383 + MPMX19_03319 0.22 -1.5 668,383 + MPMX19_03319 0.22 -1.5 668,384 - MPMX19_03319 0.22 -0.4 668,384 - MPMX19_03319 0.22 +1.3 668,384 - MPMX19_03319 0.22 -0.8 668,384 - MPMX19_03319 0.22 -1.7 668,384 - MPMX19_03319 0.22 -0.9 668,384 - MPMX19_03319 0.22 +0.2 668,384 - MPMX19_03319 0.22 +0.0 668,384 - MPMX19_03319 0.22 +1.3 668,384 - MPMX19_03319 0.22 +1.2 668,384 - MPMX19_03319 0.22 -1.0 668,384 - MPMX19_03319 0.22 -1.7 668,911 + MPMX19_03319 0.49 +0.4 668,911 + MPMX19_03319 0.49 +0.9 668,911 + MPMX19_03319 0.49 -1.0 668,911 + MPMX19_03319 0.49 +1.3 668,911 + MPMX19_03319 0.49 +2.4 668,911 + MPMX19_03319 0.49 +0.9 668,912 - MPMX19_03319 0.49 -1.0 668,912 - MPMX19_03319 0.49 -1.3 668,912 - MPMX19_03319 0.49 +0.2 668,912 - MPMX19_03319 0.49 +0.1 668,912 - MPMX19_03319 0.49 -0.1 668,912 - MPMX19_03319 0.49 -0.4 668,912 - MPMX19_03319 0.49 +1.2 668,912 - MPMX19_03319 0.49 -0.7 668,970 + MPMX19_03319 0.52 +0.2 668,971 - MPMX19_03319 0.52 +1.1 668,971 - MPMX19_03319 0.52 +1.2 669,164 + MPMX19_03319 0.62 +0.8 669,164 + MPMX19_03319 0.62 +0.0 669,164 + MPMX19_03319 0.62 -0.1 669,165 - MPMX19_03319 0.62 -0.2 669,165 - MPMX19_03319 0.62 -0.8 669,165 - MPMX19_03319 0.62 +0.6 669,165 - MPMX19_03319 0.62 +1.2 669,165 - MPMX19_03319 0.62 -1.5 669,356 - MPMX19_03319 0.72 -0.7 669,356 - MPMX19_03319 0.72 -0.3 669,356 - MPMX19_03319 0.72 -1.2 669,356 - MPMX19_03319 0.72 -2.1 669,376 + MPMX19_03319 0.73 +0.3 669,377 - MPMX19_03319 0.73 -0.7 669,377 - MPMX19_03319 0.73 -1.2 669,452 - MPMX19_03319 0.77 -0.9 669,592 + MPMX19_03319 0.84 -2.5 669,592 + MPMX19_03319 0.84 -1.4 669,592 + MPMX19_03319 0.84 +0.6 669,592 + MPMX19_03319 0.84 -0.3 669,592 + MPMX19_03319 0.84 -1.7 669,592 + MPMX19_03319 0.84 -1.8 669,593 - MPMX19_03319 0.84 -0.4 669,593 - MPMX19_03319 0.84 +0.3 669,593 - MPMX19_03319 0.84 -0.3 669,593 - MPMX19_03319 0.84 +0.4 669,593 - MPMX19_03319 0.84 +1.6 669,604 + MPMX19_03319 0.85 +0.9 669,605 - MPMX19_03319 0.85 +0.5 669,605 - MPMX19_03319 0.85 +0.2 669,605 - MPMX19_03319 0.85 +0.9 669,605 - MPMX19_03319 0.85 -1.8 669,675 - MPMX19_03319 0.88 +0.9 669,675 - MPMX19_03319 0.88 -0.5 669,675 - MPMX19_03319 0.88 -2.9 669,675 - MPMX19_03319 0.88 -0.2 669,701 + MPMX19_03319 0.90 +0.1 669,721 + -1.1 669,722 - -0.8 669,722 - -1.7 669,722 - +0.1 669,772 + -0.1 669,772 + -0.9 669,772 + -0.4 669,772 + +0.5 669,772 + -1.1 669,772 + -2.1 669,773 - -1.5 669,773 - -0.4 669,773 - -1.4 669,773 - -0.6 670,460 - MPMX19_03320 0.38 -0.1 670,872 + MPMX19_03320 0.68 -2.5 670,872 + MPMX19_03320 0.68 -0.1 670,873 - MPMX19_03320 0.68 -0.2 670,873 - MPMX19_03320 0.68 -0.8 670,873 - MPMX19_03320 0.68 -0.1 670,873 - MPMX19_03320 0.68 -0.5
Or see this region's nucleotide sequence