Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03111 and MPMX19_03112 are separated by 39 nucleotides MPMX19_03112 and MPMX19_03113 are separated by 5 nucleotides MPMX19_03113 and MPMX19_03114 overlap by 4 nucleotides
MPMX19_03111: MPMX19_03111 - Putative fatty-acid--CoA ligase FadD21, at 395,978 to 397,651
_03111
MPMX19_03112: MPMX19_03112 - Ribonuclease BN, at 397,691 to 398,431
_03112
MPMX19_03113: MPMX19_03113 - hypothetical protein, at 398,437 to 399,270
_03113
MPMX19_03114: MPMX19_03114 - hypothetical protein, at 399,267 to 400,196
_03114
Position (kb)
397
398
399 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 396.836 kb on + strand, within MPMX19_03111 at 396.836 kb on + strand, within MPMX19_03111 at 396.836 kb on + strand, within MPMX19_03111 at 396.836 kb on + strand, within MPMX19_03111 at 396.836 kb on + strand, within MPMX19_03111 at 396.837 kb on - strand, within MPMX19_03111 at 396.837 kb on - strand, within MPMX19_03111 at 396.837 kb on - strand, within MPMX19_03111 at 396.837 kb on - strand, within MPMX19_03111 at 396.932 kb on + strand, within MPMX19_03111 at 397.692 kb on + strand at 397.692 kb on + strand at 397.733 kb on + strand at 397.733 kb on + strand at 397.733 kb on + strand at 397.733 kb on + strand at 397.733 kb on + strand at 397.734 kb on - strand at 397.734 kb on - strand at 397.734 kb on - strand at 397.734 kb on - strand at 397.734 kb on - strand at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 398.265 kb on + strand, within MPMX19_03112 at 398.265 kb on + strand, within MPMX19_03112 at 398.265 kb on + strand, within MPMX19_03112 at 398.265 kb on + strand, within MPMX19_03112 at 398.266 kb on - strand, within MPMX19_03112 at 398.266 kb on - strand, within MPMX19_03112 at 398.615 kb on + strand, within MPMX19_03113 at 398.615 kb on + strand, within MPMX19_03113 at 398.615 kb on + strand, within MPMX19_03113 at 398.615 kb on + strand, within MPMX19_03113 at 398.615 kb on + strand, within MPMX19_03113 at 398.615 kb on + strand, within MPMX19_03113 at 398.616 kb on - strand, within MPMX19_03113 at 398.616 kb on - strand, within MPMX19_03113 at 398.616 kb on - strand, within MPMX19_03113 at 398.616 kb on - strand, within MPMX19_03113 at 398.616 kb on - strand, within MPMX19_03113 at 398.867 kb on + strand, within MPMX19_03113 at 398.868 kb on - strand, within MPMX19_03113 at 398.868 kb on - strand, within MPMX19_03113 at 398.868 kb on - strand, within MPMX19_03113 at 398.891 kb on + strand, within MPMX19_03113 at 398.891 kb on + strand, within MPMX19_03113 at 398.891 kb on + strand, within MPMX19_03113 at 398.891 kb on + strand, within MPMX19_03113 at 398.891 kb on + strand, within MPMX19_03113 at 398.892 kb on - strand, within MPMX19_03113 at 399.131 kb on + strand, within MPMX19_03113 at 399.131 kb on + strand, within MPMX19_03113 at 399.131 kb on + strand, within MPMX19_03113 at 399.131 kb on + strand, within MPMX19_03113 at 399.132 kb on - strand, within MPMX19_03113 at 399.132 kb on - strand, within MPMX19_03113 at 399.132 kb on - strand, within MPMX19_03113 at 399.232 kb on + strand at 399.232 kb on + strand at 399.232 kb on + strand at 399.232 kb on + strand at 399.233 kb on - strand at 399.233 kb on - strand at 399.304 kb on + strand at 399.304 kb on + strand at 399.304 kb on + strand at 399.305 kb on - strand at 399.305 kb on - strand at 399.305 kb on - strand at 399.334 kb on + strand at 399.335 kb on - strand at 399.335 kb on - strand at 399.335 kb on - strand at 399.335 kb on - strand at 399.335 kb on - strand at 399.367 kb on + strand, within MPMX19_03114 at 399.367 kb on + strand, within MPMX19_03114 at 399.391 kb on + strand, within MPMX19_03114 at 399.392 kb on - strand, within MPMX19_03114
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 396,836 + MPMX19_03111 0.51 -0.5 396,836 + MPMX19_03111 0.51 -0.1 396,836 + MPMX19_03111 0.51 -0.9 396,836 + MPMX19_03111 0.51 +0.9 396,836 + MPMX19_03111 0.51 -0.1 396,837 - MPMX19_03111 0.51 -0.3 396,837 - MPMX19_03111 0.51 +1.1 396,837 - MPMX19_03111 0.51 +0.3 396,837 - MPMX19_03111 0.51 +0.3 396,932 + MPMX19_03111 0.57 +0.3 397,692 + -0.6 397,692 + +0.3 397,733 + -1.1 397,733 + -0.8 397,733 + -2.1 397,733 + -0.4 397,733 + -2.0 397,734 - +0.1 397,734 - -1.9 397,734 - +1.3 397,734 - +0.9 397,734 - -1.6 397,794 + MPMX19_03112 0.14 +0.6 397,794 + MPMX19_03112 0.14 +0.9 397,794 + MPMX19_03112 0.14 -0.5 397,794 + MPMX19_03112 0.14 -0.4 397,794 + MPMX19_03112 0.14 +0.3 397,794 + MPMX19_03112 0.14 +1.3 397,794 + MPMX19_03112 0.14 +1.3 397,794 + MPMX19_03112 0.14 +2.3 397,795 - MPMX19_03112 0.14 +0.2 397,795 - MPMX19_03112 0.14 -0.1 397,795 - MPMX19_03112 0.14 +0.2 397,795 - MPMX19_03112 0.14 +0.2 397,795 - MPMX19_03112 0.14 +0.0 397,795 - MPMX19_03112 0.14 -0.8 397,795 - MPMX19_03112 0.14 +0.2 397,795 - MPMX19_03112 0.14 -0.2 397,795 - MPMX19_03112 0.14 -1.1 398,265 + MPMX19_03112 0.77 -0.5 398,265 + MPMX19_03112 0.77 +0.3 398,265 + MPMX19_03112 0.77 +0.3 398,265 + MPMX19_03112 0.77 -0.3 398,266 - MPMX19_03112 0.78 +0.3 398,266 - MPMX19_03112 0.78 +1.3 398,615 + MPMX19_03113 0.21 +0.3 398,615 + MPMX19_03113 0.21 +0.6 398,615 + MPMX19_03113 0.21 -2.2 398,615 + MPMX19_03113 0.21 +1.8 398,615 + MPMX19_03113 0.21 -0.1 398,615 + MPMX19_03113 0.21 -0.2 398,616 - MPMX19_03113 0.21 +0.2 398,616 - MPMX19_03113 0.21 -1.2 398,616 - MPMX19_03113 0.21 -0.1 398,616 - MPMX19_03113 0.21 -1.4 398,616 - MPMX19_03113 0.21 +0.0 398,867 + MPMX19_03113 0.52 -1.1 398,868 - MPMX19_03113 0.52 -0.2 398,868 - MPMX19_03113 0.52 -1.9 398,868 - MPMX19_03113 0.52 -1.2 398,891 + MPMX19_03113 0.54 +1.1 398,891 + MPMX19_03113 0.54 -0.9 398,891 + MPMX19_03113 0.54 +1.9 398,891 + MPMX19_03113 0.54 -0.1 398,891 + MPMX19_03113 0.54 -0.1 398,892 - MPMX19_03113 0.55 -1.1 399,131 + MPMX19_03113 0.83 -0.3 399,131 + MPMX19_03113 0.83 -2.5 399,131 + MPMX19_03113 0.83 +0.1 399,131 + MPMX19_03113 0.83 +0.5 399,132 - MPMX19_03113 0.83 -0.3 399,132 - MPMX19_03113 0.83 +0.2 399,132 - MPMX19_03113 0.83 -0.6 399,232 + -0.3 399,232 + +0.1 399,232 + -0.4 399,232 + +0.1 399,233 - -1.9 399,233 - -0.2 399,304 + -1.9 399,304 + +0.2 399,304 + +1.9 399,305 - -0.4 399,305 - -1.0 399,305 - -1.1 399,334 + +0.2 399,335 - -0.1 399,335 - -1.3 399,335 - -0.9 399,335 - -0.3 399,335 - -1.2 399,367 + MPMX19_03114 0.11 -0.3 399,367 + MPMX19_03114 0.11 +0.8 399,391 + MPMX19_03114 0.13 +0.3 399,392 - MPMX19_03114 0.13 +0.3
Or see this region's nucleotide sequence