Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03110 and MPMX19_03111 are separated by 7 nucleotides MPMX19_03111 and MPMX19_03112 are separated by 39 nucleotides MPMX19_03112 and MPMX19_03113 are separated by 5 nucleotides
MPMX19_03110: MPMX19_03110 - 3-oxoacyl-[acyl-carrier-protein] synthase 2, at 394,735 to 395,970
_03110
MPMX19_03111: MPMX19_03111 - Putative fatty-acid--CoA ligase FadD21, at 395,978 to 397,651
_03111
MPMX19_03112: MPMX19_03112 - Ribonuclease BN, at 397,691 to 398,431
_03112
MPMX19_03113: MPMX19_03113 - hypothetical protein, at 398,437 to 399,270
_03113
Position (kb)
395
396
397
398 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 394.990 kb on + strand, within MPMX19_03110 at 394.990 kb on + strand, within MPMX19_03110 at 394.990 kb on + strand, within MPMX19_03110 at 394.990 kb on + strand, within MPMX19_03110 at 394.991 kb on - strand, within MPMX19_03110 at 394.991 kb on - strand, within MPMX19_03110 at 394.991 kb on - strand, within MPMX19_03110 at 394.991 kb on - strand, within MPMX19_03110 at 394.991 kb on - strand, within MPMX19_03110 at 395.344 kb on + strand, within MPMX19_03110 at 395.344 kb on + strand, within MPMX19_03110 at 395.344 kb on + strand, within MPMX19_03110 at 395.344 kb on + strand, within MPMX19_03110 at 395.344 kb on + strand, within MPMX19_03110 at 395.344 kb on + strand, within MPMX19_03110 at 395.344 kb on + strand, within MPMX19_03110 at 395.344 kb on + strand, within MPMX19_03110 at 395.344 kb on + strand, within MPMX19_03110 at 395.344 kb on + strand, within MPMX19_03110 at 395.344 kb on + strand, within MPMX19_03110 at 395.345 kb on - strand, within MPMX19_03110 at 395.345 kb on - strand, within MPMX19_03110 at 395.345 kb on - strand, within MPMX19_03110 at 395.345 kb on - strand, within MPMX19_03110 at 395.345 kb on - strand, within MPMX19_03110 at 395.345 kb on - strand, within MPMX19_03110 at 395.345 kb on - strand, within MPMX19_03110 at 395.345 kb on - strand, within MPMX19_03110 at 395.345 kb on - strand, within MPMX19_03110 at 395.629 kb on + strand, within MPMX19_03110 at 395.630 kb on - strand, within MPMX19_03110 at 395.836 kb on + strand, within MPMX19_03110 at 395.837 kb on - strand, within MPMX19_03110 at 395.837 kb on - strand, within MPMX19_03110 at 395.837 kb on - strand, within MPMX19_03110 at 396.378 kb on + strand, within MPMX19_03111 at 396.378 kb on + strand, within MPMX19_03111 at 396.379 kb on - strand, within MPMX19_03111 at 396.379 kb on - strand, within MPMX19_03111 at 396.379 kb on - strand, within MPMX19_03111 at 396.379 kb on - strand, within MPMX19_03111 at 396.551 kb on + strand, within MPMX19_03111 at 396.551 kb on + strand, within MPMX19_03111 at 396.551 kb on + strand, within MPMX19_03111 at 396.551 kb on + strand, within MPMX19_03111 at 396.552 kb on - strand, within MPMX19_03111 at 396.552 kb on - strand, within MPMX19_03111 at 396.552 kb on - strand, within MPMX19_03111 at 396.552 kb on - strand, within MPMX19_03111 at 396.552 kb on - strand, within MPMX19_03111 at 396.552 kb on - strand, within MPMX19_03111 at 396.608 kb on + strand, within MPMX19_03111 at 396.608 kb on + strand, within MPMX19_03111 at 396.608 kb on + strand, within MPMX19_03111 at 396.608 kb on + strand, within MPMX19_03111 at 396.608 kb on + strand, within MPMX19_03111 at 396.608 kb on + strand, within MPMX19_03111 at 396.609 kb on - strand, within MPMX19_03111 at 396.609 kb on - strand, within MPMX19_03111 at 396.609 kb on - strand, within MPMX19_03111 at 396.609 kb on - strand, within MPMX19_03111 at 396.609 kb on - strand, within MPMX19_03111 at 396.689 kb on + strand, within MPMX19_03111 at 396.689 kb on + strand, within MPMX19_03111 at 396.689 kb on + strand, within MPMX19_03111 at 396.690 kb on - strand, within MPMX19_03111 at 396.690 kb on - strand, within MPMX19_03111 at 396.690 kb on - strand, within MPMX19_03111 at 396.836 kb on + strand, within MPMX19_03111 at 396.836 kb on + strand, within MPMX19_03111 at 396.836 kb on + strand, within MPMX19_03111 at 396.836 kb on + strand, within MPMX19_03111 at 396.836 kb on + strand, within MPMX19_03111 at 396.837 kb on - strand, within MPMX19_03111 at 396.837 kb on - strand, within MPMX19_03111 at 396.837 kb on - strand, within MPMX19_03111 at 396.837 kb on - strand, within MPMX19_03111 at 396.932 kb on + strand, within MPMX19_03111 at 397.692 kb on + strand at 397.692 kb on + strand at 397.733 kb on + strand at 397.733 kb on + strand at 397.733 kb on + strand at 397.733 kb on + strand at 397.733 kb on + strand at 397.734 kb on - strand at 397.734 kb on - strand at 397.734 kb on - strand at 397.734 kb on - strand at 397.734 kb on - strand at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.794 kb on + strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 397.795 kb on - strand, within MPMX19_03112 at 398.265 kb on + strand, within MPMX19_03112 at 398.265 kb on + strand, within MPMX19_03112 at 398.265 kb on + strand, within MPMX19_03112 at 398.265 kb on + strand, within MPMX19_03112 at 398.266 kb on - strand, within MPMX19_03112 at 398.266 kb on - strand, within MPMX19_03112 at 398.615 kb on + strand, within MPMX19_03113 at 398.615 kb on + strand, within MPMX19_03113 at 398.615 kb on + strand, within MPMX19_03113 at 398.615 kb on + strand, within MPMX19_03113 at 398.615 kb on + strand, within MPMX19_03113 at 398.615 kb on + strand, within MPMX19_03113 at 398.616 kb on - strand, within MPMX19_03113 at 398.616 kb on - strand, within MPMX19_03113 at 398.616 kb on - strand, within MPMX19_03113 at 398.616 kb on - strand, within MPMX19_03113 at 398.616 kb on - strand, within MPMX19_03113
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 394,990 + MPMX19_03110 0.21 -1.5 394,990 + MPMX19_03110 0.21 -0.7 394,990 + MPMX19_03110 0.21 +0.2 394,990 + MPMX19_03110 0.21 -0.4 394,991 - MPMX19_03110 0.21 -1.1 394,991 - MPMX19_03110 0.21 -0.2 394,991 - MPMX19_03110 0.21 -0.7 394,991 - MPMX19_03110 0.21 -0.8 394,991 - MPMX19_03110 0.21 -0.7 395,344 + MPMX19_03110 0.49 -0.8 395,344 + MPMX19_03110 0.49 -0.4 395,344 + MPMX19_03110 0.49 -0.5 395,344 + MPMX19_03110 0.49 -0.1 395,344 + MPMX19_03110 0.49 +0.1 395,344 + MPMX19_03110 0.49 +0.7 395,344 + MPMX19_03110 0.49 -0.7 395,344 + MPMX19_03110 0.49 -0.5 395,344 + MPMX19_03110 0.49 -0.5 395,344 + MPMX19_03110 0.49 -0.7 395,344 + MPMX19_03110 0.49 -0.9 395,345 - MPMX19_03110 0.49 -0.7 395,345 - MPMX19_03110 0.49 -0.7 395,345 - MPMX19_03110 0.49 -0.7 395,345 - MPMX19_03110 0.49 -0.0 395,345 - MPMX19_03110 0.49 +0.3 395,345 - MPMX19_03110 0.49 -0.4 395,345 - MPMX19_03110 0.49 +1.6 395,345 - MPMX19_03110 0.49 +0.7 395,345 - MPMX19_03110 0.49 +0.4 395,629 + MPMX19_03110 0.72 -0.7 395,630 - MPMX19_03110 0.72 -0.2 395,836 + MPMX19_03110 0.89 -0.9 395,837 - MPMX19_03110 0.89 -0.9 395,837 - MPMX19_03110 0.89 +0.3 395,837 - MPMX19_03110 0.89 -1.2 396,378 + MPMX19_03111 0.24 -0.2 396,378 + MPMX19_03111 0.24 -0.3 396,379 - MPMX19_03111 0.24 -1.0 396,379 - MPMX19_03111 0.24 -0.1 396,379 - MPMX19_03111 0.24 -2.0 396,379 - MPMX19_03111 0.24 +0.2 396,551 + MPMX19_03111 0.34 -0.1 396,551 + MPMX19_03111 0.34 +1.2 396,551 + MPMX19_03111 0.34 +0.6 396,551 + MPMX19_03111 0.34 -0.7 396,552 - MPMX19_03111 0.34 -0.5 396,552 - MPMX19_03111 0.34 -1.4 396,552 - MPMX19_03111 0.34 +0.2 396,552 - MPMX19_03111 0.34 +1.3 396,552 - MPMX19_03111 0.34 -2.4 396,552 - MPMX19_03111 0.34 +1.7 396,608 + MPMX19_03111 0.38 +0.2 396,608 + MPMX19_03111 0.38 -2.5 396,608 + MPMX19_03111 0.38 -0.1 396,608 + MPMX19_03111 0.38 -1.8 396,608 + MPMX19_03111 0.38 -1.7 396,608 + MPMX19_03111 0.38 +1.4 396,609 - MPMX19_03111 0.38 +0.4 396,609 - MPMX19_03111 0.38 -0.4 396,609 - MPMX19_03111 0.38 -0.4 396,609 - MPMX19_03111 0.38 +0.3 396,609 - MPMX19_03111 0.38 +0.3 396,689 + MPMX19_03111 0.42 +0.3 396,689 + MPMX19_03111 0.42 -0.4 396,689 + MPMX19_03111 0.42 +0.1 396,690 - MPMX19_03111 0.43 +0.7 396,690 - MPMX19_03111 0.43 -0.5 396,690 - MPMX19_03111 0.43 +1.1 396,836 + MPMX19_03111 0.51 -0.5 396,836 + MPMX19_03111 0.51 -0.1 396,836 + MPMX19_03111 0.51 -0.9 396,836 + MPMX19_03111 0.51 +0.9 396,836 + MPMX19_03111 0.51 -0.1 396,837 - MPMX19_03111 0.51 -0.3 396,837 - MPMX19_03111 0.51 +1.1 396,837 - MPMX19_03111 0.51 +0.3 396,837 - MPMX19_03111 0.51 +0.3 396,932 + MPMX19_03111 0.57 +0.3 397,692 + -0.6 397,692 + +0.3 397,733 + -1.1 397,733 + -0.8 397,733 + -2.1 397,733 + -0.4 397,733 + -2.0 397,734 - +0.1 397,734 - -1.9 397,734 - +1.3 397,734 - +0.9 397,734 - -1.6 397,794 + MPMX19_03112 0.14 +0.6 397,794 + MPMX19_03112 0.14 +0.9 397,794 + MPMX19_03112 0.14 -0.5 397,794 + MPMX19_03112 0.14 -0.4 397,794 + MPMX19_03112 0.14 +0.3 397,794 + MPMX19_03112 0.14 +1.3 397,794 + MPMX19_03112 0.14 +1.3 397,794 + MPMX19_03112 0.14 +2.3 397,795 - MPMX19_03112 0.14 +0.2 397,795 - MPMX19_03112 0.14 -0.1 397,795 - MPMX19_03112 0.14 +0.2 397,795 - MPMX19_03112 0.14 +0.2 397,795 - MPMX19_03112 0.14 +0.0 397,795 - MPMX19_03112 0.14 -0.8 397,795 - MPMX19_03112 0.14 +0.2 397,795 - MPMX19_03112 0.14 -0.2 397,795 - MPMX19_03112 0.14 -1.1 398,265 + MPMX19_03112 0.77 -0.5 398,265 + MPMX19_03112 0.77 +0.3 398,265 + MPMX19_03112 0.77 +0.3 398,265 + MPMX19_03112 0.77 -0.3 398,266 - MPMX19_03112 0.78 +0.3 398,266 - MPMX19_03112 0.78 +1.3 398,615 + MPMX19_03113 0.21 +0.3 398,615 + MPMX19_03113 0.21 +0.6 398,615 + MPMX19_03113 0.21 -2.2 398,615 + MPMX19_03113 0.21 +1.8 398,615 + MPMX19_03113 0.21 -0.1 398,615 + MPMX19_03113 0.21 -0.2 398,616 - MPMX19_03113 0.21 +0.2 398,616 - MPMX19_03113 0.21 -1.2 398,616 - MPMX19_03113 0.21 -0.1 398,616 - MPMX19_03113 0.21 -1.4 398,616 - MPMX19_03113 0.21 +0.0
Or see this region's nucleotide sequence