Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02890 and MPMX19_02891 are separated by 33 nucleotides MPMX19_02891 and MPMX19_02892 are separated by 316 nucleotides
MPMX19_02890: MPMX19_02890 - Glucarate dehydratase, at 142,256 to 143,593
_02890
MPMX19_02891: MPMX19_02891 - Mannonate dehydratase, at 143,627 to 144,715
_02891
MPMX19_02892: MPMX19_02892 - IS1380 family transposase ISAzs25, at 145,032 to 146,372
_02892
Position (kb)
143
144
145 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 142.821 kb on + strand, within MPMX19_02890 at 142.821 kb on + strand, within MPMX19_02890 at 142.821 kb on + strand, within MPMX19_02890 at 142.822 kb on - strand, within MPMX19_02890 at 143.136 kb on + strand, within MPMX19_02890 at 143.136 kb on + strand, within MPMX19_02890 at 143.136 kb on + strand, within MPMX19_02890 at 143.136 kb on + strand, within MPMX19_02890 at 143.136 kb on + strand, within MPMX19_02890 at 143.136 kb on + strand, within MPMX19_02890 at 143.136 kb on + strand, within MPMX19_02890 at 143.136 kb on + strand, within MPMX19_02890 at 143.137 kb on - strand, within MPMX19_02890 at 143.137 kb on - strand, within MPMX19_02890 at 143.137 kb on - strand, within MPMX19_02890 at 143.137 kb on - strand, within MPMX19_02890 at 143.137 kb on - strand, within MPMX19_02890 at 143.137 kb on - strand, within MPMX19_02890 at 143.137 kb on - strand, within MPMX19_02890 at 143.137 kb on - strand, within MPMX19_02890 at 143.137 kb on - strand, within MPMX19_02890 at 143.145 kb on + strand, within MPMX19_02890 at 143.145 kb on + strand, within MPMX19_02890 at 143.145 kb on + strand, within MPMX19_02890 at 143.145 kb on + strand, within MPMX19_02890 at 143.146 kb on - strand, within MPMX19_02890 at 143.490 kb on + strand at 143.490 kb on + strand at 143.490 kb on + strand at 143.490 kb on + strand at 143.491 kb on - strand at 143.491 kb on - strand at 143.653 kb on + strand at 143.654 kb on - strand at 143.655 kb on + strand at 143.656 kb on - strand at 143.739 kb on + strand, within MPMX19_02891 at 143.740 kb on - strand, within MPMX19_02891 at 143.820 kb on + strand, within MPMX19_02891 at 143.821 kb on - strand, within MPMX19_02891 at 143.821 kb on - strand, within MPMX19_02891 at 143.821 kb on - strand, within MPMX19_02891 at 143.857 kb on + strand, within MPMX19_02891 at 143.857 kb on + strand, within MPMX19_02891 at 143.858 kb on - strand, within MPMX19_02891 at 143.858 kb on - strand, within MPMX19_02891 at 144.123 kb on + strand, within MPMX19_02891 at 144.123 kb on + strand, within MPMX19_02891 at 144.123 kb on + strand, within MPMX19_02891 at 144.123 kb on + strand, within MPMX19_02891 at 144.124 kb on - strand, within MPMX19_02891 at 144.124 kb on - strand, within MPMX19_02891 at 144.124 kb on - strand, within MPMX19_02891 at 144.268 kb on - strand, within MPMX19_02891 at 144.268 kb on - strand, within MPMX19_02891 at 144.297 kb on + strand, within MPMX19_02891 at 144.297 kb on + strand, within MPMX19_02891 at 144.297 kb on + strand, within MPMX19_02891 at 144.297 kb on + strand, within MPMX19_02891 at 144.298 kb on - strand, within MPMX19_02891 at 144.298 kb on - strand, within MPMX19_02891 at 144.298 kb on - strand, within MPMX19_02891 at 144.298 kb on - strand, within MPMX19_02891 at 144.384 kb on + strand, within MPMX19_02891 at 144.385 kb on - strand, within MPMX19_02891 at 144.385 kb on - strand, within MPMX19_02891 at 144.385 kb on - strand, within MPMX19_02891 at 144.709 kb on + strand at 144.710 kb on - strand at 144.710 kb on - strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.711 kb on + strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.712 kb on - strand at 144.815 kb on + strand at 144.815 kb on + strand at 144.815 kb on + strand at 144.815 kb on + strand at 144.871 kb on - strand at 144.871 kb on - strand at 144.871 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 142,821 + MPMX19_02890 0.42 +0.6 142,821 + MPMX19_02890 0.42 -1.2 142,821 + MPMX19_02890 0.42 +0.7 142,822 - MPMX19_02890 0.42 -0.4 143,136 + MPMX19_02890 0.66 +0.1 143,136 + MPMX19_02890 0.66 -1.0 143,136 + MPMX19_02890 0.66 -0.7 143,136 + MPMX19_02890 0.66 -1.6 143,136 + MPMX19_02890 0.66 +0.1 143,136 + MPMX19_02890 0.66 +0.1 143,136 + MPMX19_02890 0.66 +0.1 143,136 + MPMX19_02890 0.66 +0.1 143,137 - MPMX19_02890 0.66 +0.5 143,137 - MPMX19_02890 0.66 +0.4 143,137 - MPMX19_02890 0.66 +1.5 143,137 - MPMX19_02890 0.66 -0.1 143,137 - MPMX19_02890 0.66 +0.4 143,137 - MPMX19_02890 0.66 -2.0 143,137 - MPMX19_02890 0.66 -1.5 143,137 - MPMX19_02890 0.66 -1.8 143,137 - MPMX19_02890 0.66 +0.4 143,145 + MPMX19_02890 0.66 -0.6 143,145 + MPMX19_02890 0.66 -0.1 143,145 + MPMX19_02890 0.66 -0.8 143,145 + MPMX19_02890 0.66 +0.2 143,146 - MPMX19_02890 0.67 -1.9 143,490 + -0.3 143,490 + +1.4 143,490 + +0.7 143,490 + +0.2 143,491 - +0.8 143,491 - -0.7 143,653 + -1.5 143,654 - -0.4 143,655 + +1.9 143,656 - +0.5 143,739 + MPMX19_02891 0.10 -1.4 143,740 - MPMX19_02891 0.10 -0.5 143,820 + MPMX19_02891 0.18 -0.8 143,821 - MPMX19_02891 0.18 +0.1 143,821 - MPMX19_02891 0.18 -1.1 143,821 - MPMX19_02891 0.18 -1.1 143,857 + MPMX19_02891 0.21 -0.9 143,857 + MPMX19_02891 0.21 +0.2 143,858 - MPMX19_02891 0.21 -0.9 143,858 - MPMX19_02891 0.21 +0.9 144,123 + MPMX19_02891 0.46 -1.8 144,123 + MPMX19_02891 0.46 -0.9 144,123 + MPMX19_02891 0.46 +0.1 144,123 + MPMX19_02891 0.46 -0.1 144,124 - MPMX19_02891 0.46 -1.1 144,124 - MPMX19_02891 0.46 +0.4 144,124 - MPMX19_02891 0.46 -0.1 144,268 - MPMX19_02891 0.59 -0.9 144,268 - MPMX19_02891 0.59 +0.1 144,297 + MPMX19_02891 0.62 -0.3 144,297 + MPMX19_02891 0.62 -0.1 144,297 + MPMX19_02891 0.62 +0.9 144,297 + MPMX19_02891 0.62 -1.2 144,298 - MPMX19_02891 0.62 -0.9 144,298 - MPMX19_02891 0.62 +0.2 144,298 - MPMX19_02891 0.62 -1.2 144,298 - MPMX19_02891 0.62 +0.1 144,384 + MPMX19_02891 0.70 -0.2 144,385 - MPMX19_02891 0.70 +0.5 144,385 - MPMX19_02891 0.70 -1.3 144,385 - MPMX19_02891 0.70 -1.0 144,709 + -1.2 144,710 - +1.3 144,710 - -1.1 144,711 + -0.1 144,711 + -1.1 144,711 + -0.4 144,711 + -0.5 144,711 + +0.9 144,711 + -0.6 144,711 + +1.4 144,711 + -1.4 144,711 + -0.6 144,711 + -0.4 144,711 + +1.1 144,711 + -0.8 144,711 + -0.1 144,711 + +0.5 144,711 + -0.3 144,711 + +0.2 144,711 + -0.5 144,711 + +0.6 144,711 + -1.5 144,711 + -0.1 144,711 + +0.2 144,711 + -1.4 144,711 + -0.8 144,711 + +0.1 144,711 + +0.3 144,711 + +0.2 144,711 + -0.4 144,711 + +0.8 144,711 + -1.2 144,711 + +0.1 144,711 + -1.2 144,711 + -2.0 144,712 - +0.5 144,712 - -1.8 144,712 - -0.1 144,712 - -0.5 144,712 - -1.2 144,712 - -0.6 144,712 - -1.9 144,712 - +0.1 144,712 - -0.9 144,712 - +1.1 144,712 - +0.3 144,712 - -0.1 144,712 - -0.5 144,712 - +0.0 144,712 - +0.1 144,712 - -1.4 144,712 - +0.9 144,712 - +0.4 144,712 - -1.0 144,712 - -0.1 144,712 - +0.8 144,712 - +0.1 144,712 - +0.6 144,712 - +0.6 144,712 - +0.0 144,712 - -0.6 144,712 - +0.1 144,712 - -1.3 144,712 - -0.3 144,712 - +0.6 144,815 + -0.9 144,815 + +0.1 144,815 + -2.1 144,815 + +0.5 144,871 - -0.6 144,871 - -0.1 144,871 - +0.5
Or see this region's nucleotide sequence