Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02832 and MPMX19_02833 are separated by 8 nucleotides MPMX19_02833 and MPMX19_02834 overlap by 4 nucleotides MPMX19_02834 and MPMX19_02835 overlap by 4 nucleotides MPMX19_02835 and MPMX19_02836 overlap by 14 nucleotides
MPMX19_02832: MPMX19_02832 - putative cystine transporter YijE, at 74,154 to 75,062
_02832
MPMX19_02833: MPMX19_02833 - Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase PksC, at 75,071 to 75,988
_02833
MPMX19_02834: MPMX19_02834 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase, at 75,985 to 76,860
_02834
MPMX19_02835: MPMX19_02835 - Phosphoribosyl-dephospho-CoA transferase, at 76,857 to 77,525
_02835
MPMX19_02836: MPMX19_02836 - hypothetical protein, at 77,512 to 78,216
_02836
Position (kb) 75
76
77 Strain fitness (log2 ratio) -2
-1
0
1 at 75.066 kb on + strand at 75.066 kb on + strand at 75.067 kb on - strand at 75.067 kb on - strand at 75.067 kb on - strand at 75.306 kb on + strand, within MPMX19_02833 at 75.306 kb on + strand, within MPMX19_02833 at 75.306 kb on + strand, within MPMX19_02833 at 75.306 kb on + strand, within MPMX19_02833 at 75.307 kb on - strand, within MPMX19_02833 at 75.499 kb on + strand, within MPMX19_02833 at 75.499 kb on + strand, within MPMX19_02833 at 75.499 kb on + strand, within MPMX19_02833 at 75.499 kb on + strand, within MPMX19_02833 at 75.499 kb on + strand, within MPMX19_02833 at 75.499 kb on + strand, within MPMX19_02833 at 75.499 kb on + strand, within MPMX19_02833 at 75.499 kb on + strand, within MPMX19_02833 at 75.499 kb on + strand, within MPMX19_02833 at 75.499 kb on + strand, within MPMX19_02833 at 75.499 kb on + strand, within MPMX19_02833 at 75.499 kb on + strand, within MPMX19_02833 at 75.500 kb on - strand, within MPMX19_02833 at 75.500 kb on - strand, within MPMX19_02833 at 75.500 kb on - strand, within MPMX19_02833 at 75.500 kb on - strand, within MPMX19_02833 at 75.500 kb on - strand, within MPMX19_02833 at 75.500 kb on - strand, within MPMX19_02833 at 75.500 kb on - strand, within MPMX19_02833 at 75.500 kb on - strand, within MPMX19_02833 at 75.500 kb on - strand, within MPMX19_02833 at 75.668 kb on + strand, within MPMX19_02833 at 75.669 kb on - strand, within MPMX19_02833 at 76.652 kb on + strand, within MPMX19_02834 at 76.652 kb on + strand, within MPMX19_02834 at 76.652 kb on + strand, within MPMX19_02834 at 76.652 kb on + strand, within MPMX19_02834 at 76.653 kb on - strand, within MPMX19_02834 at 76.653 kb on - strand, within MPMX19_02834 at 76.766 kb on + strand, within MPMX19_02834 at 76.766 kb on + strand, within MPMX19_02834 at 76.767 kb on - strand, within MPMX19_02834 at 76.767 kb on - strand, within MPMX19_02834 at 76.767 kb on - strand, within MPMX19_02834 at 76.767 kb on - strand, within MPMX19_02834 at 77.119 kb on + strand, within MPMX19_02835 at 77.119 kb on + strand, within MPMX19_02835 at 77.119 kb on + strand, within MPMX19_02835 at 77.119 kb on + strand, within MPMX19_02835 at 77.120 kb on - strand, within MPMX19_02835 at 77.120 kb on - strand, within MPMX19_02835 at 77.120 kb on - strand, within MPMX19_02835 at 77.120 kb on - strand, within MPMX19_02835 at 77.158 kb on + strand, within MPMX19_02835 at 77.159 kb on - strand, within MPMX19_02835 at 77.159 kb on - strand, within MPMX19_02835 at 77.159 kb on - strand, within MPMX19_02835 at 77.684 kb on + strand, within MPMX19_02836 at 77.685 kb on - strand, within MPMX19_02836 at 77.685 kb on - strand, within MPMX19_02836 at 77.685 kb on - strand, within MPMX19_02836 at 77.685 kb on - strand, within MPMX19_02836 at 77.685 kb on - strand, within MPMX19_02836 at 77.813 kb on + strand, within MPMX19_02836 at 77.813 kb on + strand, within MPMX19_02836 at 77.814 kb on - strand, within MPMX19_02836 at 77.814 kb on - strand, within MPMX19_02836 at 77.814 kb on - strand, within MPMX19_02836 at 77.814 kb on - strand, within MPMX19_02836 at 77.814 kb on - strand, within MPMX19_02836 at 77.814 kb on - strand, within MPMX19_02836
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 75,066 + -0.6 75,066 + -0.2 75,067 - -0.1 75,067 - -1.0 75,067 - +1.3 75,306 + MPMX19_02833 0.26 -0.6 75,306 + MPMX19_02833 0.26 -0.4 75,306 + MPMX19_02833 0.26 -0.3 75,306 + MPMX19_02833 0.26 -1.2 75,307 - MPMX19_02833 0.26 -1.0 75,499 + MPMX19_02833 0.47 -1.2 75,499 + MPMX19_02833 0.47 +0.9 75,499 + MPMX19_02833 0.47 -0.5 75,499 + MPMX19_02833 0.47 -0.6 75,499 + MPMX19_02833 0.47 -1.2 75,499 + MPMX19_02833 0.47 -1.3 75,499 + MPMX19_02833 0.47 -1.6 75,499 + MPMX19_02833 0.47 -0.6 75,499 + MPMX19_02833 0.47 -0.2 75,499 + MPMX19_02833 0.47 -0.2 75,499 + MPMX19_02833 0.47 -1.0 75,499 + MPMX19_02833 0.47 -1.5 75,500 - MPMX19_02833 0.47 +0.6 75,500 - MPMX19_02833 0.47 +0.6 75,500 - MPMX19_02833 0.47 -0.2 75,500 - MPMX19_02833 0.47 +0.5 75,500 - MPMX19_02833 0.47 -1.1 75,500 - MPMX19_02833 0.47 -1.1 75,500 - MPMX19_02833 0.47 -0.4 75,500 - MPMX19_02833 0.47 -0.4 75,500 - MPMX19_02833 0.47 -0.6 75,668 + MPMX19_02833 0.65 -0.2 75,669 - MPMX19_02833 0.65 +0.1 76,652 + MPMX19_02834 0.76 -1.1 76,652 + MPMX19_02834 0.76 -1.0 76,652 + MPMX19_02834 0.76 -1.1 76,652 + MPMX19_02834 0.76 +0.2 76,653 - MPMX19_02834 0.76 -0.6 76,653 - MPMX19_02834 0.76 +0.5 76,766 + MPMX19_02834 0.89 +0.9 76,766 + MPMX19_02834 0.89 -0.1 76,767 - MPMX19_02834 0.89 -1.4 76,767 - MPMX19_02834 0.89 -0.5 76,767 - MPMX19_02834 0.89 -1.3 76,767 - MPMX19_02834 0.89 +0.0 77,119 + MPMX19_02835 0.39 -0.8 77,119 + MPMX19_02835 0.39 -0.1 77,119 + MPMX19_02835 0.39 -1.1 77,119 + MPMX19_02835 0.39 -0.3 77,120 - MPMX19_02835 0.39 -0.2 77,120 - MPMX19_02835 0.39 +0.8 77,120 - MPMX19_02835 0.39 +0.3 77,120 - MPMX19_02835 0.39 +0.8 77,158 + MPMX19_02835 0.45 -1.2 77,159 - MPMX19_02835 0.45 -2.1 77,159 - MPMX19_02835 0.45 -0.8 77,159 - MPMX19_02835 0.45 +0.0 77,684 + MPMX19_02836 0.24 -0.5 77,685 - MPMX19_02836 0.25 +0.0 77,685 - MPMX19_02836 0.25 +0.4 77,685 - MPMX19_02836 0.25 +0.2 77,685 - MPMX19_02836 0.25 -0.1 77,685 - MPMX19_02836 0.25 -0.3 77,813 + MPMX19_02836 0.43 -0.4 77,813 + MPMX19_02836 0.43 +0.5 77,814 - MPMX19_02836 0.43 -0.9 77,814 - MPMX19_02836 0.43 -2.6 77,814 - MPMX19_02836 0.43 -0.6 77,814 - MPMX19_02836 0.43 +0.7 77,814 - MPMX19_02836 0.43 -0.5 77,814 - MPMX19_02836 0.43 -0.9
Or see this region's nucleotide sequence