Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02607 and MPMX19_02608 are separated by 7 nucleotides MPMX19_02608 and MPMX19_02609 are separated by 47 nucleotides MPMX19_02609 and MPMX19_02610 are separated by 201 nucleotides
MPMX19_02607: MPMX19_02607 - hypothetical protein, at 2,724,630 to 2,725,520
_02607
MPMX19_02608: MPMX19_02608 - hypothetical protein, at 2,725,528 to 2,726,391
_02608
MPMX19_02609: MPMX19_02609 - tRNA-Gly, at 2,726,439 to 2,726,512
_02609
MPMX19_02610: MPMX19_02610 - hypothetical protein, at 2,726,714 to 2,726,962
_02610
Position (kb)
2726
2727 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2725.473 kb on + strand at 2725.473 kb on + strand at 2725.473 kb on + strand at 2725.473 kb on + strand at 2725.473 kb on + strand at 2725.473 kb on + strand at 2725.473 kb on + strand at 2725.473 kb on + strand at 2725.473 kb on + strand at 2725.473 kb on + strand at 2725.473 kb on + strand at 2725.473 kb on + strand at 2725.473 kb on + strand at 2725.474 kb on - strand at 2725.474 kb on - strand at 2725.474 kb on - strand at 2725.474 kb on - strand at 2725.474 kb on - strand at 2725.474 kb on - strand at 2725.474 kb on - strand at 2725.474 kb on - strand at 2725.474 kb on - strand at 2725.474 kb on - strand at 2725.474 kb on - strand at 2725.474 kb on - strand at 2725.474 kb on - strand at 2725.485 kb on + strand at 2725.485 kb on + strand at 2725.485 kb on + strand at 2725.485 kb on + strand at 2725.486 kb on - strand at 2725.588 kb on + strand at 2725.588 kb on + strand at 2725.588 kb on + strand at 2725.588 kb on + strand at 2725.588 kb on + strand at 2725.588 kb on + strand at 2725.588 kb on + strand at 2725.589 kb on - strand at 2725.589 kb on - strand at 2725.589 kb on - strand at 2725.589 kb on - strand at 2725.589 kb on - strand at 2725.589 kb on - strand at 2725.589 kb on - strand at 2725.589 kb on - strand at 2725.589 kb on - strand at 2725.589 kb on - strand at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.675 kb on + strand, within MPMX19_02608 at 2725.676 kb on - strand, within MPMX19_02608 at 2725.676 kb on - strand, within MPMX19_02608 at 2725.676 kb on - strand, within MPMX19_02608 at 2725.676 kb on - strand, within MPMX19_02608 at 2725.676 kb on - strand, within MPMX19_02608 at 2725.676 kb on - strand, within MPMX19_02608 at 2725.676 kb on - strand, within MPMX19_02608 at 2725.676 kb on - strand, within MPMX19_02608 at 2725.676 kb on - strand, within MPMX19_02608 at 2725.676 kb on - strand, within MPMX19_02608 at 2725.772 kb on - strand, within MPMX19_02608 at 2725.772 kb on - strand, within MPMX19_02608 at 2726.137 kb on + strand, within MPMX19_02608 at 2726.137 kb on + strand, within MPMX19_02608 at 2726.137 kb on + strand, within MPMX19_02608 at 2726.137 kb on + strand, within MPMX19_02608 at 2726.137 kb on + strand, within MPMX19_02608 at 2726.137 kb on + strand, within MPMX19_02608 at 2726.137 kb on + strand, within MPMX19_02608 at 2726.137 kb on + strand, within MPMX19_02608 at 2726.137 kb on + strand, within MPMX19_02608 at 2726.137 kb on + strand, within MPMX19_02608 at 2726.137 kb on + strand, within MPMX19_02608 at 2726.137 kb on + strand, within MPMX19_02608 at 2726.138 kb on - strand, within MPMX19_02608 at 2726.138 kb on - strand, within MPMX19_02608 at 2726.138 kb on - strand, within MPMX19_02608 at 2726.138 kb on - strand, within MPMX19_02608 at 2726.138 kb on - strand, within MPMX19_02608 at 2726.138 kb on - strand, within MPMX19_02608 at 2726.138 kb on - strand, within MPMX19_02608 at 2726.138 kb on - strand, within MPMX19_02608 at 2726.138 kb on - strand, within MPMX19_02608 at 2726.138 kb on - strand, within MPMX19_02608 at 2726.138 kb on - strand, within MPMX19_02608 at 2726.138 kb on - strand, within MPMX19_02608 at 2726.385 kb on + strand at 2726.386 kb on - strand at 2726.386 kb on - strand at 2726.403 kb on + strand at 2726.403 kb on + strand at 2726.403 kb on + strand at 2726.403 kb on + strand at 2726.403 kb on + strand at 2726.403 kb on + strand at 2726.404 kb on - strand at 2726.404 kb on - strand at 2726.404 kb on - strand at 2726.404 kb on - strand at 2726.404 kb on - strand at 2726.404 kb on - strand at 2726.423 kb on + strand at 2726.423 kb on + strand at 2726.423 kb on + strand at 2726.423 kb on + strand at 2726.424 kb on - strand at 2726.425 kb on + strand at 2726.425 kb on + strand at 2726.425 kb on + strand at 2726.425 kb on + strand at 2726.425 kb on + strand at 2726.425 kb on + strand at 2726.425 kb on + strand at 2726.426 kb on - strand at 2726.426 kb on - strand at 2726.426 kb on - strand at 2726.446 kb on + strand at 2726.446 kb on + strand at 2726.446 kb on + strand at 2726.446 kb on + strand at 2726.446 kb on + strand at 2726.446 kb on + strand at 2726.446 kb on + strand at 2726.446 kb on + strand at 2726.446 kb on + strand at 2726.447 kb on - strand, within MPMX19_02609 at 2726.447 kb on - strand, within MPMX19_02609 at 2726.447 kb on - strand, within MPMX19_02609 at 2726.447 kb on - strand, within MPMX19_02609 at 2726.447 kb on - strand, within MPMX19_02609 at 2726.457 kb on + strand, within MPMX19_02609 at 2726.457 kb on + strand, within MPMX19_02609 at 2726.457 kb on + strand, within MPMX19_02609 at 2726.458 kb on - strand, within MPMX19_02609 at 2726.458 kb on - strand, within MPMX19_02609 at 2726.479 kb on + strand, within MPMX19_02609 at 2726.479 kb on + strand, within MPMX19_02609 at 2726.479 kb on + strand, within MPMX19_02609 at 2726.480 kb on - strand, within MPMX19_02609 at 2726.480 kb on - strand, within MPMX19_02609 at 2726.480 kb on - strand, within MPMX19_02609 at 2726.480 kb on - strand, within MPMX19_02609 at 2726.480 kb on - strand, within MPMX19_02609 at 2726.480 kb on - strand, within MPMX19_02609 at 2726.480 kb on - strand, within MPMX19_02609 at 2726.480 kb on - strand, within MPMX19_02609 at 2726.480 kb on - strand, within MPMX19_02609 at 2726.852 kb on + strand, within MPMX19_02610 at 2726.853 kb on - strand, within MPMX19_02610 at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.960 kb on + strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.961 kb on - strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.986 kb on + strand at 2726.987 kb on - strand at 2726.987 kb on - strand at 2726.987 kb on - strand at 2726.987 kb on - strand at 2726.987 kb on - strand at 2726.987 kb on - strand at 2726.987 kb on - strand at 2726.987 kb on - strand at 2727.166 kb on + strand at 2727.166 kb on + strand at 2727.166 kb on + strand at 2727.166 kb on + strand at 2727.166 kb on + strand at 2727.166 kb on + strand at 2727.166 kb on + strand at 2727.166 kb on + strand at 2727.166 kb on + strand at 2727.166 kb on + strand at 2727.166 kb on + strand at 2727.167 kb on - strand at 2727.167 kb on - strand at 2727.167 kb on - strand at 2727.167 kb on - strand at 2727.167 kb on - strand at 2727.167 kb on - strand at 2727.167 kb on - strand at 2727.439 kb on + strand at 2727.439 kb on + strand at 2727.440 kb on - strand at 2727.440 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,725,473 + +1.1 2,725,473 + +0.5 2,725,473 + -0.2 2,725,473 + -0.5 2,725,473 + +0.5 2,725,473 + -0.2 2,725,473 + -0.7 2,725,473 + +3.1 2,725,473 + +0.5 2,725,473 + +0.1 2,725,473 + -0.9 2,725,473 + +0.1 2,725,473 + +0.1 2,725,474 - +0.1 2,725,474 - -0.5 2,725,474 - +1.1 2,725,474 - +0.8 2,725,474 - +1.5 2,725,474 - +0.8 2,725,474 - +2.1 2,725,474 - +1.5 2,725,474 - +1.1 2,725,474 - +1.5 2,725,474 - +2.1 2,725,474 - +0.5 2,725,474 - +0.5 2,725,485 + +0.5 2,725,485 + +0.1 2,725,485 + +1.1 2,725,485 + +1.5 2,725,486 - +1.7 2,725,588 + -0.1 2,725,588 + -0.7 2,725,588 + -0.4 2,725,588 + +0.4 2,725,588 + +0.5 2,725,588 + -0.2 2,725,588 + +0.5 2,725,589 - +2.1 2,725,589 - +1.1 2,725,589 - +1.1 2,725,589 - +0.5 2,725,589 - +1.5 2,725,589 - +0.3 2,725,589 - +1.5 2,725,589 - +0.5 2,725,589 - +0.1 2,725,589 - +2.1 2,725,675 + MPMX19_02608 0.17 +0.9 2,725,675 + MPMX19_02608 0.17 +0.9 2,725,675 + MPMX19_02608 0.17 -1.2 2,725,675 + MPMX19_02608 0.17 +1.7 2,725,675 + MPMX19_02608 0.17 +2.1 2,725,675 + MPMX19_02608 0.17 -1.1 2,725,675 + MPMX19_02608 0.17 -0.5 2,725,675 + MPMX19_02608 0.17 +1.5 2,725,675 + MPMX19_02608 0.17 +3.1 2,725,675 + MPMX19_02608 0.17 -0.9 2,725,675 + MPMX19_02608 0.17 +0.1 2,725,675 + MPMX19_02608 0.17 +2.1 2,725,675 + MPMX19_02608 0.17 +1.1 2,725,675 + MPMX19_02608 0.17 +0.1 2,725,675 + MPMX19_02608 0.17 +2.1 2,725,676 - MPMX19_02608 0.17 +2.1 2,725,676 - MPMX19_02608 0.17 +0.5 2,725,676 - MPMX19_02608 0.17 -0.2 2,725,676 - MPMX19_02608 0.17 +0.8 2,725,676 - MPMX19_02608 0.17 +2.7 2,725,676 - MPMX19_02608 0.17 +2.1 2,725,676 - MPMX19_02608 0.17 -0.5 2,725,676 - MPMX19_02608 0.17 +1.1 2,725,676 - MPMX19_02608 0.17 +2.1 2,725,676 - MPMX19_02608 0.17 +0.1 2,725,772 - MPMX19_02608 0.28 -0.5 2,725,772 - MPMX19_02608 0.28 +2.1 2,726,137 + MPMX19_02608 0.70 +0.1 2,726,137 + MPMX19_02608 0.70 +3.1 2,726,137 + MPMX19_02608 0.70 -0.1 2,726,137 + MPMX19_02608 0.70 +0.5 2,726,137 + MPMX19_02608 0.70 +0.9 2,726,137 + MPMX19_02608 0.70 -0.5 2,726,137 + MPMX19_02608 0.70 +3.1 2,726,137 + MPMX19_02608 0.70 -0.2 2,726,137 + MPMX19_02608 0.70 -0.9 2,726,137 + MPMX19_02608 0.70 +1.4 2,726,137 + MPMX19_02608 0.70 +2.1 2,726,137 + MPMX19_02608 0.70 +1.1 2,726,138 - MPMX19_02608 0.71 +1.1 2,726,138 - MPMX19_02608 0.71 -1.1 2,726,138 - MPMX19_02608 0.71 +1.1 2,726,138 - MPMX19_02608 0.71 +0.1 2,726,138 - MPMX19_02608 0.71 +0.1 2,726,138 - MPMX19_02608 0.71 +1.1 2,726,138 - MPMX19_02608 0.71 +0.8 2,726,138 - MPMX19_02608 0.71 +3.1 2,726,138 - MPMX19_02608 0.71 -1.4 2,726,138 - MPMX19_02608 0.71 -0.1 2,726,138 - MPMX19_02608 0.71 -0.2 2,726,138 - MPMX19_02608 0.71 -0.9 2,726,385 + -0.1 2,726,386 - +0.4 2,726,386 - -0.1 2,726,403 + +0.3 2,726,403 + -0.1 2,726,403 + -0.1 2,726,403 + -1.3 2,726,403 + -0.8 2,726,403 + -0.7 2,726,404 - -0.2 2,726,404 - +0.5 2,726,404 - -0.2 2,726,404 - +0.3 2,726,404 - -0.8 2,726,404 - -0.3 2,726,423 + +0.5 2,726,423 + +0.8 2,726,423 + -0.8 2,726,423 + -0.7 2,726,424 - +0.4 2,726,425 + -0.1 2,726,425 + -0.5 2,726,425 + -1.2 2,726,425 + +0.1 2,726,425 + +0.2 2,726,425 + -0.2 2,726,425 + +0.0 2,726,426 - -2.0 2,726,426 - -1.5 2,726,426 - -2.0 2,726,446 + +1.4 2,726,446 + -0.9 2,726,446 + +0.5 2,726,446 + -0.3 2,726,446 + -0.0 2,726,446 + +0.1 2,726,446 + +0.5 2,726,446 + -0.2 2,726,446 + -2.2 2,726,447 - MPMX19_02609 0.11 -0.2 2,726,447 - MPMX19_02609 0.11 -0.0 2,726,447 - MPMX19_02609 0.11 +0.5 2,726,447 - MPMX19_02609 0.11 -0.4 2,726,447 - MPMX19_02609 0.11 -1.6 2,726,457 + MPMX19_02609 0.24 -0.7 2,726,457 + MPMX19_02609 0.24 +0.3 2,726,457 + MPMX19_02609 0.24 -0.7 2,726,458 - MPMX19_02609 0.26 -0.9 2,726,458 - MPMX19_02609 0.26 -0.7 2,726,479 + MPMX19_02609 0.54 +0.9 2,726,479 + MPMX19_02609 0.54 -0.3 2,726,479 + MPMX19_02609 0.54 +0.9 2,726,480 - MPMX19_02609 0.55 -0.9 2,726,480 - MPMX19_02609 0.55 +1.4 2,726,480 - MPMX19_02609 0.55 -0.6 2,726,480 - MPMX19_02609 0.55 +0.2 2,726,480 - MPMX19_02609 0.55 +0.5 2,726,480 - MPMX19_02609 0.55 -1.4 2,726,480 - MPMX19_02609 0.55 -0.5 2,726,480 - MPMX19_02609 0.55 -0.9 2,726,480 - MPMX19_02609 0.55 -0.0 2,726,852 + MPMX19_02610 0.55 +0.2 2,726,853 - MPMX19_02610 0.56 +0.5 2,726,960 + -0.1 2,726,960 + -1.5 2,726,960 + +1.4 2,726,960 + +0.1 2,726,960 + -0.7 2,726,960 + +0.6 2,726,960 + -0.6 2,726,960 + +0.6 2,726,960 + +0.1 2,726,960 + -1.4 2,726,960 + -2.8 2,726,960 + +0.2 2,726,960 + -1.5 2,726,960 + -1.6 2,726,960 + +1.1 2,726,960 + -2.2 2,726,960 + -0.1 2,726,961 - -2.5 2,726,961 - -0.5 2,726,961 - -0.4 2,726,961 - +0.0 2,726,961 - +0.2 2,726,961 - +0.8 2,726,961 - -1.5 2,726,961 - +0.6 2,726,961 - +0.1 2,726,961 - -1.0 2,726,961 - -0.8 2,726,961 - +0.8 2,726,961 - -0.1 2,726,961 - -1.0 2,726,961 - -0.3 2,726,961 - -0.2 2,726,961 - +1.4 2,726,961 - +0.5 2,726,961 - -0.4 2,726,961 - +0.7 2,726,961 - -1.5 2,726,961 - +0.3 2,726,961 - +0.1 2,726,986 + -0.7 2,726,986 + -1.5 2,726,986 + -0.7 2,726,986 + -1.4 2,726,986 + -1.4 2,726,986 + +0.4 2,726,986 + +1.5 2,726,986 + -0.7 2,726,986 + -1.3 2,726,986 + -0.1 2,726,986 + +1.8 2,726,986 + +0.9 2,726,986 + +0.7 2,726,986 + +1.8 2,726,986 + +1.3 2,726,986 + -2.1 2,726,986 + -1.0 2,726,986 + -0.7 2,726,986 + +0.6 2,726,986 + +1.2 2,726,986 + +0.7 2,726,987 - +0.5 2,726,987 - +1.0 2,726,987 - -0.1 2,726,987 - +0.9 2,726,987 - -0.1 2,726,987 - +0.9 2,726,987 - -2.4 2,726,987 - -0.2 2,727,166 + +1.5 2,727,166 + -0.5 2,727,166 + +1.0 2,727,166 + +0.5 2,727,166 + -0.2 2,727,166 + -0.8 2,727,166 + +1.2 2,727,166 + +0.8 2,727,166 + +1.4 2,727,166 + -0.0 2,727,166 + -2.8 2,727,167 - +1.5 2,727,167 - -0.1 2,727,167 - -1.5 2,727,167 - -0.9 2,727,167 - +0.5 2,727,167 - -1.1 2,727,167 - -1.2 2,727,439 + -0.9 2,727,439 + -1.3 2,727,440 - +0.3 2,727,440 - -1.1
Or see this region's nucleotide sequence