Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02443 and MPMX19_02444 are separated by 127 nucleotides MPMX19_02444 and MPMX19_02445 are separated by 26 nucleotides MPMX19_02445 and MPMX19_02446 are separated by 282 nucleotides
MPMX19_02443: MPMX19_02443 - hypothetical protein, at 2,564,674 to 2,565,225
_02443
MPMX19_02444: MPMX19_02444 - hypothetical protein, at 2,565,353 to 2,566,117
_02444
MPMX19_02445: MPMX19_02445 - hypothetical protein, at 2,566,144 to 2,566,584
_02445
MPMX19_02446: MPMX19_02446 - Release factor glutamine methyltransferase, at 2,566,867 to 2,567,715
_02446
Position (kb)
2566
2567 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2565.237 kb on + strand at 2565.238 kb on - strand at 2565.277 kb on + strand at 2565.277 kb on + strand at 2565.278 kb on - strand at 2565.278 kb on - strand at 2565.278 kb on - strand at 2565.300 kb on + strand at 2565.300 kb on + strand at 2565.300 kb on + strand at 2565.300 kb on + strand at 2565.300 kb on + strand at 2565.301 kb on - strand at 2565.301 kb on - strand at 2565.301 kb on - strand at 2565.301 kb on - strand at 2565.301 kb on - strand at 2565.301 kb on - strand at 2565.301 kb on - strand at 2565.301 kb on - strand at 2565.301 kb on - strand at 2565.547 kb on + strand, within MPMX19_02444 at 2565.689 kb on + strand, within MPMX19_02444 at 2565.689 kb on + strand, within MPMX19_02444 at 2565.689 kb on + strand, within MPMX19_02444 at 2565.690 kb on - strand, within MPMX19_02444 at 2565.690 kb on - strand, within MPMX19_02444 at 2565.690 kb on - strand, within MPMX19_02444 at 2565.864 kb on + strand, within MPMX19_02444 at 2565.864 kb on + strand, within MPMX19_02444 at 2565.864 kb on + strand, within MPMX19_02444 at 2565.865 kb on - strand, within MPMX19_02444 at 2565.865 kb on - strand, within MPMX19_02444 at 2566.031 kb on + strand, within MPMX19_02444 at 2566.031 kb on + strand, within MPMX19_02444 at 2566.032 kb on - strand, within MPMX19_02444 at 2566.115 kb on + strand at 2566.115 kb on + strand at 2566.115 kb on + strand at 2566.116 kb on - strand at 2566.116 kb on - strand at 2566.131 kb on + strand at 2566.131 kb on + strand at 2566.131 kb on + strand at 2566.131 kb on + strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.818 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,565,237 + -0.7 2,565,238 - -0.6 2,565,277 + +1.5 2,565,277 + -1.3 2,565,278 - -0.1 2,565,278 - -0.5 2,565,278 - -0.5 2,565,300 + -0.4 2,565,300 + -0.4 2,565,300 + +0.1 2,565,300 + +0.5 2,565,300 + +1.1 2,565,301 - -0.6 2,565,301 - -1.1 2,565,301 - +0.4 2,565,301 - -0.6 2,565,301 - -1.4 2,565,301 - -1.4 2,565,301 - -1.5 2,565,301 - -2.5 2,565,301 - +0.1 2,565,547 + MPMX19_02444 0.25 +1.5 2,565,689 + MPMX19_02444 0.44 +1.2 2,565,689 + MPMX19_02444 0.44 +0.0 2,565,689 + MPMX19_02444 0.44 -0.8 2,565,690 - MPMX19_02444 0.44 +2.4 2,565,690 - MPMX19_02444 0.44 +0.3 2,565,690 - MPMX19_02444 0.44 -0.4 2,565,864 + MPMX19_02444 0.67 -2.2 2,565,864 + MPMX19_02444 0.67 +1.1 2,565,864 + MPMX19_02444 0.67 -0.9 2,565,865 - MPMX19_02444 0.67 -0.8 2,565,865 - MPMX19_02444 0.67 -0.6 2,566,031 + MPMX19_02444 0.89 -0.2 2,566,031 + MPMX19_02444 0.89 -0.5 2,566,032 - MPMX19_02444 0.89 -0.5 2,566,115 + -0.1 2,566,115 + -0.1 2,566,115 + +2.1 2,566,116 - +0.5 2,566,116 - +0.8 2,566,131 + +0.3 2,566,131 + +0.2 2,566,131 + -1.2 2,566,131 + -0.4 2,566,132 - +0.0 2,566,132 - +0.5 2,566,132 - +0.1 2,566,132 - -0.3 2,566,132 - +0.4 2,566,132 - -0.3 2,566,132 - +0.1 2,566,132 - -0.1 2,566,132 - +0.4 2,566,132 - +0.9 2,566,132 - -0.0 2,566,132 - -1.2 2,566,142 + -0.4 2,566,142 + -1.2 2,566,142 + -0.6 2,566,142 + -0.1 2,566,142 + -0.4 2,566,142 + -1.6 2,566,142 + +0.3 2,566,142 + -2.0 2,566,142 + +0.3 2,566,142 + -1.4 2,566,142 + -0.0 2,566,142 + -0.3 2,566,142 + -2.4 2,566,142 + +0.8 2,566,142 + -1.9 2,566,142 + +1.4 2,566,142 + -0.7 2,566,142 + -0.1 2,566,143 - -0.4 2,566,143 - -1.3 2,566,143 - -0.5 2,566,143 - +0.1 2,566,143 - -0.7 2,566,143 - -0.5 2,566,143 - -0.4 2,566,143 - +0.6 2,566,143 - -1.9 2,566,143 - +0.2 2,566,143 - -0.4 2,566,143 - +0.4 2,566,818 - -1.1
Or see this region's nucleotide sequence