Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02382 and MPMX19_02383 are separated by 268 nucleotides MPMX19_02383 and MPMX19_02384 are separated by 63 nucleotides MPMX19_02384 and MPMX19_02385 are separated by 101 nucleotides
MPMX19_02382: MPMX19_02382 - hypothetical protein, at 2,505,765 to 2,507,039
_02382
MPMX19_02383: MPMX19_02383 - Integration host factor subunit beta, at 2,507,308 to 2,507,589
_02383
MPMX19_02384: MPMX19_02384 - hypothetical protein, at 2,507,653 to 2,508,054
_02384
MPMX19_02385: MPMX19_02385 - Delta(1)-pyrroline-2-carboxylate reductase, at 2,508,156 to 2,509,115
_02385
Position (kb)
2507
2508
2509 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2507.197 kb on + strand at 2507.197 kb on + strand at 2507.197 kb on + strand at 2507.197 kb on + strand at 2507.198 kb on - strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.271 kb on + strand at 2507.272 kb on - strand at 2507.272 kb on - strand at 2507.272 kb on - strand at 2507.272 kb on - strand at 2507.286 kb on + strand at 2507.286 kb on + strand at 2507.286 kb on + strand at 2507.286 kb on + strand at 2507.286 kb on + strand at 2507.286 kb on + strand at 2507.286 kb on + strand at 2507.287 kb on - strand at 2507.287 kb on - strand at 2507.359 kb on + strand, within MPMX19_02383 at 2507.359 kb on + strand, within MPMX19_02383 at 2507.360 kb on - strand, within MPMX19_02383 at 2507.618 kb on + strand at 2507.618 kb on + strand at 2507.629 kb on + strand at 2507.630 kb on - strand at 2507.630 kb on - strand at 2507.630 kb on - strand at 2507.648 kb on + strand at 2507.649 kb on - strand at 2507.728 kb on - strand, within MPMX19_02384 at 2507.779 kb on + strand, within MPMX19_02384 at 2507.779 kb on + strand, within MPMX19_02384 at 2507.779 kb on + strand, within MPMX19_02384 at 2507.779 kb on + strand, within MPMX19_02384 at 2507.779 kb on + strand, within MPMX19_02384 at 2507.779 kb on + strand, within MPMX19_02384 at 2507.779 kb on + strand, within MPMX19_02384 at 2507.779 kb on + strand, within MPMX19_02384 at 2507.779 kb on + strand, within MPMX19_02384 at 2507.779 kb on + strand, within MPMX19_02384 at 2507.780 kb on - strand, within MPMX19_02384 at 2507.780 kb on - strand, within MPMX19_02384 at 2507.780 kb on - strand, within MPMX19_02384 at 2507.780 kb on - strand, within MPMX19_02384 at 2507.780 kb on - strand, within MPMX19_02384 at 2507.780 kb on - strand, within MPMX19_02384 at 2507.780 kb on - strand, within MPMX19_02384 at 2507.780 kb on - strand, within MPMX19_02384 at 2507.780 kb on - strand, within MPMX19_02384 at 2507.780 kb on - strand, within MPMX19_02384 at 2507.780 kb on - strand, within MPMX19_02384 at 2507.893 kb on + strand, within MPMX19_02384 at 2507.893 kb on + strand, within MPMX19_02384 at 2507.893 kb on + strand, within MPMX19_02384 at 2507.893 kb on + strand, within MPMX19_02384 at 2507.893 kb on + strand, within MPMX19_02384 at 2507.893 kb on + strand, within MPMX19_02384 at 2507.893 kb on + strand, within MPMX19_02384 at 2507.893 kb on + strand, within MPMX19_02384 at 2507.894 kb on - strand, within MPMX19_02384 at 2507.894 kb on - strand, within MPMX19_02384 at 2507.894 kb on - strand, within MPMX19_02384 at 2507.894 kb on - strand, within MPMX19_02384 at 2507.894 kb on - strand, within MPMX19_02384 at 2507.894 kb on - strand, within MPMX19_02384 at 2507.894 kb on - strand, within MPMX19_02384 at 2508.081 kb on + strand at 2508.082 kb on - strand at 2508.082 kb on - strand at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.282 kb on + strand, within MPMX19_02385 at 2508.283 kb on - strand, within MPMX19_02385 at 2508.283 kb on - strand, within MPMX19_02385 at 2508.283 kb on - strand, within MPMX19_02385 at 2508.283 kb on - strand, within MPMX19_02385 at 2508.283 kb on - strand, within MPMX19_02385 at 2508.283 kb on - strand, within MPMX19_02385 at 2508.283 kb on - strand, within MPMX19_02385 at 2508.283 kb on - strand, within MPMX19_02385 at 2508.283 kb on - strand, within MPMX19_02385 at 2508.283 kb on - strand, within MPMX19_02385 at 2508.283 kb on - strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.408 kb on + strand, within MPMX19_02385 at 2508.409 kb on - strand, within MPMX19_02385 at 2508.409 kb on - strand, within MPMX19_02385 at 2508.409 kb on - strand, within MPMX19_02385 at 2508.409 kb on - strand, within MPMX19_02385 at 2508.409 kb on - strand, within MPMX19_02385 at 2508.513 kb on + strand, within MPMX19_02385 at 2508.513 kb on + strand, within MPMX19_02385 at 2508.513 kb on + strand, within MPMX19_02385 at 2508.513 kb on + strand, within MPMX19_02385 at 2508.513 kb on + strand, within MPMX19_02385 at 2508.513 kb on + strand, within MPMX19_02385 at 2508.513 kb on + strand, within MPMX19_02385 at 2508.513 kb on + strand, within MPMX19_02385 at 2508.513 kb on + strand, within MPMX19_02385 at 2508.513 kb on + strand, within MPMX19_02385 at 2508.514 kb on - strand, within MPMX19_02385 at 2508.514 kb on - strand, within MPMX19_02385 at 2508.514 kb on - strand, within MPMX19_02385 at 2508.514 kb on - strand, within MPMX19_02385 at 2508.547 kb on + strand, within MPMX19_02385 at 2508.547 kb on + strand, within MPMX19_02385 at 2508.547 kb on + strand, within MPMX19_02385 at 2508.547 kb on + strand, within MPMX19_02385 at 2508.547 kb on + strand, within MPMX19_02385 at 2508.547 kb on + strand, within MPMX19_02385 at 2508.547 kb on + strand, within MPMX19_02385 at 2508.547 kb on + strand, within MPMX19_02385 at 2508.548 kb on - strand, within MPMX19_02385 at 2508.548 kb on - strand, within MPMX19_02385 at 2508.548 kb on - strand, within MPMX19_02385 at 2509.011 kb on + strand, within MPMX19_02385 at 2509.011 kb on + strand, within MPMX19_02385 at 2509.011 kb on + strand, within MPMX19_02385 at 2509.011 kb on + strand, within MPMX19_02385 at 2509.011 kb on + strand, within MPMX19_02385 at 2509.012 kb on - strand, within MPMX19_02385 at 2509.012 kb on - strand, within MPMX19_02385 at 2509.012 kb on - strand, within MPMX19_02385
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,507,197 + -0.3 2,507,197 + +0.1 2,507,197 + -0.1 2,507,197 + +0.1 2,507,198 - -1.1 2,507,271 + +0.4 2,507,271 + -1.2 2,507,271 + -1.6 2,507,271 + -1.4 2,507,271 + +0.5 2,507,271 + -1.9 2,507,271 + -0.9 2,507,271 + -1.5 2,507,271 + -1.4 2,507,271 + +0.3 2,507,271 + +1.0 2,507,271 + -0.1 2,507,271 + +1.1 2,507,271 + -0.2 2,507,271 + -0.5 2,507,271 + -0.9 2,507,271 + -0.4 2,507,271 + -0.2 2,507,271 + +1.3 2,507,271 + +0.2 2,507,271 + -0.3 2,507,272 - -0.2 2,507,272 - +0.1 2,507,272 - -0.5 2,507,272 - -0.2 2,507,286 + +0.4 2,507,286 + -1.3 2,507,286 + -0.2 2,507,286 + -1.0 2,507,286 + -0.9 2,507,286 + +0.4 2,507,286 + -1.2 2,507,287 - +0.1 2,507,287 - +1.1 2,507,359 + MPMX19_02383 0.18 +1.3 2,507,359 + MPMX19_02383 0.18 +0.1 2,507,360 - MPMX19_02383 0.18 -0.2 2,507,618 + +1.4 2,507,618 + +0.4 2,507,629 + -1.6 2,507,630 - -0.3 2,507,630 - -0.4 2,507,630 - +0.1 2,507,648 + +0.3 2,507,649 - -0.6 2,507,728 - MPMX19_02384 0.19 -0.9 2,507,779 + MPMX19_02384 0.31 -1.5 2,507,779 + MPMX19_02384 0.31 -1.0 2,507,779 + MPMX19_02384 0.31 +0.4 2,507,779 + MPMX19_02384 0.31 -1.9 2,507,779 + MPMX19_02384 0.31 +0.1 2,507,779 + MPMX19_02384 0.31 +0.5 2,507,779 + MPMX19_02384 0.31 -0.8 2,507,779 + MPMX19_02384 0.31 +0.2 2,507,779 + MPMX19_02384 0.31 -1.4 2,507,779 + MPMX19_02384 0.31 -0.9 2,507,780 - MPMX19_02384 0.32 -1.1 2,507,780 - MPMX19_02384 0.32 -1.2 2,507,780 - MPMX19_02384 0.32 +1.9 2,507,780 - MPMX19_02384 0.32 +0.8 2,507,780 - MPMX19_02384 0.32 -0.8 2,507,780 - MPMX19_02384 0.32 -0.4 2,507,780 - MPMX19_02384 0.32 +0.4 2,507,780 - MPMX19_02384 0.32 -2.0 2,507,780 - MPMX19_02384 0.32 +1.0 2,507,780 - MPMX19_02384 0.32 +0.4 2,507,780 - MPMX19_02384 0.32 -1.0 2,507,893 + MPMX19_02384 0.60 -0.7 2,507,893 + MPMX19_02384 0.60 +0.0 2,507,893 + MPMX19_02384 0.60 -0.6 2,507,893 + MPMX19_02384 0.60 -1.4 2,507,893 + MPMX19_02384 0.60 -0.8 2,507,893 + MPMX19_02384 0.60 -0.3 2,507,893 + MPMX19_02384 0.60 +1.1 2,507,893 + MPMX19_02384 0.60 +0.2 2,507,894 - MPMX19_02384 0.60 +0.0 2,507,894 - MPMX19_02384 0.60 +1.0 2,507,894 - MPMX19_02384 0.60 +0.1 2,507,894 - MPMX19_02384 0.60 -2.2 2,507,894 - MPMX19_02384 0.60 -0.7 2,507,894 - MPMX19_02384 0.60 +0.9 2,507,894 - MPMX19_02384 0.60 +0.9 2,508,081 + +0.9 2,508,082 - -0.3 2,508,082 - -0.3 2,508,282 + MPMX19_02385 0.13 -1.0 2,508,282 + MPMX19_02385 0.13 -0.2 2,508,282 + MPMX19_02385 0.13 +0.5 2,508,282 + MPMX19_02385 0.13 +0.5 2,508,282 + MPMX19_02385 0.13 +0.0 2,508,282 + MPMX19_02385 0.13 +0.3 2,508,282 + MPMX19_02385 0.13 -0.1 2,508,282 + MPMX19_02385 0.13 -0.2 2,508,282 + MPMX19_02385 0.13 +0.2 2,508,282 + MPMX19_02385 0.13 -1.1 2,508,282 + MPMX19_02385 0.13 +0.1 2,508,282 + MPMX19_02385 0.13 +1.7 2,508,282 + MPMX19_02385 0.13 -0.6 2,508,282 + MPMX19_02385 0.13 +0.3 2,508,282 + MPMX19_02385 0.13 -0.9 2,508,283 - MPMX19_02385 0.13 -1.7 2,508,283 - MPMX19_02385 0.13 -1.2 2,508,283 - MPMX19_02385 0.13 +0.8 2,508,283 - MPMX19_02385 0.13 -1.2 2,508,283 - MPMX19_02385 0.13 +1.8 2,508,283 - MPMX19_02385 0.13 +0.7 2,508,283 - MPMX19_02385 0.13 -2.3 2,508,283 - MPMX19_02385 0.13 -0.2 2,508,283 - MPMX19_02385 0.13 -0.7 2,508,283 - MPMX19_02385 0.13 +0.1 2,508,283 - MPMX19_02385 0.13 +0.9 2,508,408 + MPMX19_02385 0.26 +0.8 2,508,408 + MPMX19_02385 0.26 +0.4 2,508,408 + MPMX19_02385 0.26 +2.1 2,508,408 + MPMX19_02385 0.26 +0.7 2,508,408 + MPMX19_02385 0.26 -0.5 2,508,408 + MPMX19_02385 0.26 +0.1 2,508,408 + MPMX19_02385 0.26 +1.2 2,508,408 + MPMX19_02385 0.26 -0.2 2,508,408 + MPMX19_02385 0.26 -1.5 2,508,408 + MPMX19_02385 0.26 -0.9 2,508,408 + MPMX19_02385 0.26 -0.1 2,508,408 + MPMX19_02385 0.26 -1.4 2,508,408 + MPMX19_02385 0.26 -0.3 2,508,408 + MPMX19_02385 0.26 -0.4 2,508,409 - MPMX19_02385 0.26 -1.6 2,508,409 - MPMX19_02385 0.26 -1.4 2,508,409 - MPMX19_02385 0.26 +1.5 2,508,409 - MPMX19_02385 0.26 +0.1 2,508,409 - MPMX19_02385 0.26 -1.7 2,508,513 + MPMX19_02385 0.37 -0.6 2,508,513 + MPMX19_02385 0.37 +0.6 2,508,513 + MPMX19_02385 0.37 -2.1 2,508,513 + MPMX19_02385 0.37 +0.9 2,508,513 + MPMX19_02385 0.37 -1.1 2,508,513 + MPMX19_02385 0.37 -1.4 2,508,513 + MPMX19_02385 0.37 -1.1 2,508,513 + MPMX19_02385 0.37 +0.2 2,508,513 + MPMX19_02385 0.37 -1.1 2,508,513 + MPMX19_02385 0.37 -0.5 2,508,514 - MPMX19_02385 0.37 +0.8 2,508,514 - MPMX19_02385 0.37 +0.7 2,508,514 - MPMX19_02385 0.37 +0.1 2,508,514 - MPMX19_02385 0.37 +1.5 2,508,547 + MPMX19_02385 0.41 -1.0 2,508,547 + MPMX19_02385 0.41 -0.4 2,508,547 + MPMX19_02385 0.41 -0.4 2,508,547 + MPMX19_02385 0.41 +0.7 2,508,547 + MPMX19_02385 0.41 +1.1 2,508,547 + MPMX19_02385 0.41 -1.5 2,508,547 + MPMX19_02385 0.41 -0.4 2,508,547 + MPMX19_02385 0.41 +0.1 2,508,548 - MPMX19_02385 0.41 -0.5 2,508,548 - MPMX19_02385 0.41 +1.0 2,508,548 - MPMX19_02385 0.41 -2.5 2,509,011 + MPMX19_02385 0.89 +0.6 2,509,011 + MPMX19_02385 0.89 -0.2 2,509,011 + MPMX19_02385 0.89 -0.2 2,509,011 + MPMX19_02385 0.89 -0.1 2,509,011 + MPMX19_02385 0.89 -1.7 2,509,012 - MPMX19_02385 0.89 -0.7 2,509,012 - MPMX19_02385 0.89 -1.5 2,509,012 - MPMX19_02385 0.89 -1.2
Or see this region's nucleotide sequence