Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02179 and MPMX19_02180 are separated by 126 nucleotides MPMX19_02180 and MPMX19_02181 are separated by 69 nucleotides MPMX19_02181 and MPMX19_02182 are separated by 105 nucleotides
MPMX19_02179: MPMX19_02179 - 33 kDa chaperonin, at 2,279,944 to 2,280,885
_02179
MPMX19_02180: MPMX19_02180 - hypothetical protein, at 2,281,012 to 2,281,608
_02180
MPMX19_02181: MPMX19_02181 - hypothetical protein, at 2,281,678 to 2,281,932
_02181
MPMX19_02182: MPMX19_02182 - Low affinity potassium transport system protein kup, at 2,282,038 to 2,283,930
_02182
Position (kb)
2281
2282 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2280.868 kb on + strand at 2280.869 kb on - strand at 2280.869 kb on - strand at 2280.906 kb on + strand at 2280.906 kb on + strand at 2280.971 kb on + strand at 2280.971 kb on + strand at 2280.972 kb on - strand at 2281.169 kb on - strand, within MPMX19_02180 at 2281.348 kb on + strand, within MPMX19_02180 at 2281.348 kb on + strand, within MPMX19_02180 at 2281.348 kb on + strand, within MPMX19_02180 at 2281.348 kb on + strand, within MPMX19_02180 at 2281.348 kb on + strand, within MPMX19_02180 at 2281.349 kb on - strand, within MPMX19_02180 at 2281.349 kb on - strand, within MPMX19_02180 at 2281.375 kb on + strand, within MPMX19_02180 at 2281.376 kb on - strand, within MPMX19_02180 at 2281.376 kb on - strand, within MPMX19_02180 at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.696 kb on + strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.697 kb on - strand at 2281.823 kb on + strand, within MPMX19_02181 at 2281.823 kb on + strand, within MPMX19_02181 at 2281.823 kb on + strand, within MPMX19_02181 at 2281.823 kb on + strand, within MPMX19_02181 at 2281.823 kb on + strand, within MPMX19_02181 at 2281.823 kb on + strand, within MPMX19_02181 at 2281.824 kb on - strand, within MPMX19_02181 at 2281.824 kb on - strand, within MPMX19_02181 at 2281.824 kb on - strand, within MPMX19_02181 at 2281.824 kb on - strand, within MPMX19_02181 at 2281.824 kb on - strand, within MPMX19_02181 at 2281.920 kb on + strand at 2281.920 kb on + strand at 2281.921 kb on - strand at 2281.930 kb on + strand at 2281.930 kb on + strand at 2281.930 kb on + strand at 2282.039 kb on + strand at 2282.040 kb on - strand at 2282.093 kb on + strand at 2282.093 kb on + strand at 2282.093 kb on + strand at 2282.093 kb on + strand at 2282.093 kb on + strand at 2282.094 kb on - strand at 2282.094 kb on - strand at 2282.094 kb on - strand at 2282.094 kb on - strand at 2282.204 kb on + strand at 2282.204 kb on + strand at 2282.204 kb on + strand at 2282.205 kb on - strand at 2282.205 kb on - strand at 2282.205 kb on - strand at 2282.205 kb on - strand at 2282.205 kb on - strand at 2282.417 kb on + strand, within MPMX19_02182 at 2282.417 kb on + strand, within MPMX19_02182 at 2282.417 kb on + strand, within MPMX19_02182 at 2282.417 kb on + strand, within MPMX19_02182 at 2282.417 kb on + strand, within MPMX19_02182 at 2282.417 kb on + strand, within MPMX19_02182 at 2282.417 kb on + strand, within MPMX19_02182 at 2282.417 kb on + strand, within MPMX19_02182 at 2282.417 kb on + strand, within MPMX19_02182 at 2282.417 kb on + strand, within MPMX19_02182 at 2282.417 kb on + strand, within MPMX19_02182 at 2282.417 kb on + strand, within MPMX19_02182 at 2282.417 kb on + strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182 at 2282.418 kb on - strand, within MPMX19_02182
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,280,868 + -0.5 2,280,869 - +0.5 2,280,869 - +0.2 2,280,906 + +2.3 2,280,906 + -0.3 2,280,971 + +0.5 2,280,971 + -0.0 2,280,972 - -1.0 2,281,169 - MPMX19_02180 0.26 +0.2 2,281,348 + MPMX19_02180 0.56 -0.2 2,281,348 + MPMX19_02180 0.56 +0.9 2,281,348 + MPMX19_02180 0.56 -0.2 2,281,348 + MPMX19_02180 0.56 +0.7 2,281,348 + MPMX19_02180 0.56 +0.0 2,281,349 - MPMX19_02180 0.56 -0.4 2,281,349 - MPMX19_02180 0.56 +0.6 2,281,375 + MPMX19_02180 0.61 -1.0 2,281,376 - MPMX19_02180 0.61 -0.7 2,281,376 - MPMX19_02180 0.61 -0.1 2,281,696 + -1.3 2,281,696 + -1.1 2,281,696 + +0.7 2,281,696 + +1.0 2,281,696 + +0.7 2,281,696 + -0.2 2,281,696 + +0.0 2,281,696 + +1.4 2,281,696 + -0.1 2,281,696 + +0.5 2,281,696 + -0.3 2,281,696 + +0.5 2,281,696 + -1.5 2,281,696 + -0.6 2,281,696 + +1.2 2,281,696 + -1.0 2,281,696 + -1.0 2,281,696 + -1.4 2,281,696 + -0.4 2,281,697 - +0.2 2,281,697 - +0.3 2,281,697 - +0.2 2,281,697 - -0.7 2,281,697 - +0.0 2,281,697 - +0.0 2,281,697 - -0.4 2,281,697 - +0.0 2,281,697 - +0.3 2,281,697 - -0.3 2,281,697 - +0.1 2,281,697 - -0.1 2,281,697 - -1.0 2,281,697 - +0.7 2,281,697 - -1.5 2,281,697 - -1.2 2,281,697 - -0.9 2,281,697 - -0.1 2,281,697 - +0.3 2,281,697 - -0.6 2,281,823 + MPMX19_02181 0.57 -1.0 2,281,823 + MPMX19_02181 0.57 -2.6 2,281,823 + MPMX19_02181 0.57 -1.5 2,281,823 + MPMX19_02181 0.57 -0.8 2,281,823 + MPMX19_02181 0.57 +0.0 2,281,823 + MPMX19_02181 0.57 +1.9 2,281,824 - MPMX19_02181 0.57 +0.2 2,281,824 - MPMX19_02181 0.57 +0.1 2,281,824 - MPMX19_02181 0.57 -1.0 2,281,824 - MPMX19_02181 0.57 -0.1 2,281,824 - MPMX19_02181 0.57 -0.0 2,281,920 + -1.9 2,281,920 + -0.1 2,281,921 - -0.4 2,281,930 + -1.0 2,281,930 + +1.4 2,281,930 + +0.2 2,282,039 + +0.5 2,282,040 - +1.0 2,282,093 + +0.5 2,282,093 + -1.7 2,282,093 + -1.1 2,282,093 + +0.5 2,282,093 + -2.4 2,282,094 - +0.0 2,282,094 - +0.5 2,282,094 - -1.1 2,282,094 - -1.1 2,282,204 + +1.1 2,282,204 + -1.4 2,282,204 + -0.5 2,282,205 - -0.3 2,282,205 - +0.2 2,282,205 - -1.0 2,282,205 - -1.0 2,282,205 - +0.2 2,282,417 + MPMX19_02182 0.20 -0.6 2,282,417 + MPMX19_02182 0.20 +0.6 2,282,417 + MPMX19_02182 0.20 +0.6 2,282,417 + MPMX19_02182 0.20 -1.9 2,282,417 + MPMX19_02182 0.20 -2.5 2,282,417 + MPMX19_02182 0.20 -0.3 2,282,417 + MPMX19_02182 0.20 +0.5 2,282,417 + MPMX19_02182 0.20 -2.0 2,282,417 + MPMX19_02182 0.20 -1.1 2,282,417 + MPMX19_02182 0.20 +1.0 2,282,417 + MPMX19_02182 0.20 +1.3 2,282,417 + MPMX19_02182 0.20 -0.9 2,282,417 + MPMX19_02182 0.20 +0.7 2,282,418 - MPMX19_02182 0.20 -1.3 2,282,418 - MPMX19_02182 0.20 -0.7 2,282,418 - MPMX19_02182 0.20 +0.1 2,282,418 - MPMX19_02182 0.20 +0.5 2,282,418 - MPMX19_02182 0.20 -0.6 2,282,418 - MPMX19_02182 0.20 -1.4 2,282,418 - MPMX19_02182 0.20 -0.7 2,282,418 - MPMX19_02182 0.20 +0.5 2,282,418 - MPMX19_02182 0.20 +0.7 2,282,418 - MPMX19_02182 0.20 +0.6 2,282,418 - MPMX19_02182 0.20 +1.0 2,282,418 - MPMX19_02182 0.20 +0.5 2,282,418 - MPMX19_02182 0.20 -0.5 2,282,418 - MPMX19_02182 0.20 -0.8 2,282,418 - MPMX19_02182 0.20 -0.9
Or see this region's nucleotide sequence