Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02171 and MPMX19_02172 are separated by 345 nucleotides MPMX19_02172 and MPMX19_02173 are separated by 617 nucleotides
MPMX19_02171: MPMX19_02171 - putative ABC transporter ATP-binding protein YejF, at 2,271,192 to 2,272,832
_02171
MPMX19_02172: MPMX19_02172 - putative GTPase, at 2,273,178 to 2,274,188
_02172
MPMX19_02173: MPMX19_02173 - tRNA-Arg, at 2,274,806 to 2,274,900
_02173
Position (kb)
2273
2274
2275 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2272.321 kb on - strand, within MPMX19_02171 at 2272.321 kb on - strand, within MPMX19_02171 at 2272.321 kb on - strand, within MPMX19_02171 at 2272.638 kb on + strand, within MPMX19_02171 at 2272.638 kb on + strand, within MPMX19_02171 at 2272.638 kb on + strand, within MPMX19_02171 at 2272.638 kb on + strand, within MPMX19_02171 at 2272.638 kb on + strand, within MPMX19_02171 at 2272.638 kb on + strand, within MPMX19_02171 at 2272.638 kb on + strand, within MPMX19_02171 at 2272.638 kb on + strand, within MPMX19_02171 at 2272.639 kb on - strand, within MPMX19_02171 at 2272.639 kb on - strand, within MPMX19_02171 at 2272.639 kb on - strand, within MPMX19_02171 at 2272.639 kb on - strand, within MPMX19_02171 at 2272.639 kb on - strand, within MPMX19_02171 at 2272.639 kb on - strand, within MPMX19_02171 at 2272.639 kb on - strand, within MPMX19_02171 at 2272.639 kb on - strand, within MPMX19_02171 at 2272.639 kb on - strand, within MPMX19_02171 at 2272.764 kb on + strand at 2272.764 kb on + strand at 2272.764 kb on + strand at 2272.764 kb on + strand at 2272.764 kb on + strand at 2272.764 kb on + strand at 2272.764 kb on + strand at 2272.764 kb on + strand at 2272.764 kb on + strand at 2272.764 kb on + strand at 2272.764 kb on + strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.765 kb on - strand at 2272.904 kb on + strand at 2272.904 kb on + strand at 2272.905 kb on - strand at 2272.905 kb on - strand at 2272.905 kb on - strand at 2272.914 kb on - strand at 2272.914 kb on - strand at 2272.914 kb on - strand at 2273.117 kb on + strand at 2273.117 kb on + strand at 2273.139 kb on + strand at 2273.140 kb on - strand at 2273.140 kb on - strand at 2273.145 kb on - strand at 2273.343 kb on + strand, within MPMX19_02172 at 2273.344 kb on - strand, within MPMX19_02172 at 2273.344 kb on - strand, within MPMX19_02172 at 2273.344 kb on - strand, within MPMX19_02172 at 2273.344 kb on - strand, within MPMX19_02172 at 2273.507 kb on + strand, within MPMX19_02172 at 2273.507 kb on + strand, within MPMX19_02172 at 2273.507 kb on + strand, within MPMX19_02172 at 2273.507 kb on + strand, within MPMX19_02172 at 2273.507 kb on + strand, within MPMX19_02172 at 2273.507 kb on + strand, within MPMX19_02172 at 2273.507 kb on + strand, within MPMX19_02172 at 2273.507 kb on + strand, within MPMX19_02172 at 2273.508 kb on - strand, within MPMX19_02172 at 2273.508 kb on - strand, within MPMX19_02172 at 2273.508 kb on - strand, within MPMX19_02172 at 2273.508 kb on - strand, within MPMX19_02172 at 2273.508 kb on - strand, within MPMX19_02172 at 2273.508 kb on - strand, within MPMX19_02172 at 2273.844 kb on + strand, within MPMX19_02172 at 2273.844 kb on + strand, within MPMX19_02172 at 2274.147 kb on - strand at 2274.147 kb on - strand at 2274.147 kb on - strand at 2274.201 kb on + strand at 2274.201 kb on + strand at 2274.201 kb on + strand at 2274.201 kb on + strand at 2274.201 kb on + strand at 2274.201 kb on + strand at 2274.201 kb on + strand at 2274.202 kb on - strand at 2274.202 kb on - strand at 2274.202 kb on - strand at 2274.202 kb on - strand at 2274.202 kb on - strand at 2274.202 kb on - strand at 2274.215 kb on + strand at 2274.215 kb on + strand at 2274.216 kb on - strand at 2274.256 kb on - strand at 2274.261 kb on + strand at 2274.261 kb on + strand at 2274.261 kb on + strand at 2274.261 kb on + strand at 2274.262 kb on - strand at 2274.262 kb on - strand at 2274.262 kb on - strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.389 kb on + strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.390 kb on - strand at 2274.401 kb on + strand at 2274.401 kb on + strand at 2274.402 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,272,321 - MPMX19_02171 0.69 -0.8 2,272,321 - MPMX19_02171 0.69 -1.3 2,272,321 - MPMX19_02171 0.69 -0.7 2,272,638 + MPMX19_02171 0.88 -0.7 2,272,638 + MPMX19_02171 0.88 +0.6 2,272,638 + MPMX19_02171 0.88 +1.3 2,272,638 + MPMX19_02171 0.88 +1.0 2,272,638 + MPMX19_02171 0.88 -0.3 2,272,638 + MPMX19_02171 0.88 -1.6 2,272,638 + MPMX19_02171 0.88 -1.7 2,272,638 + MPMX19_02171 0.88 -1.1 2,272,639 - MPMX19_02171 0.88 -1.0 2,272,639 - MPMX19_02171 0.88 +0.7 2,272,639 - MPMX19_02171 0.88 -0.5 2,272,639 - MPMX19_02171 0.88 -0.5 2,272,639 - MPMX19_02171 0.88 -0.7 2,272,639 - MPMX19_02171 0.88 -0.5 2,272,639 - MPMX19_02171 0.88 +0.0 2,272,639 - MPMX19_02171 0.88 -0.1 2,272,639 - MPMX19_02171 0.88 -1.0 2,272,764 + -0.3 2,272,764 + -1.0 2,272,764 + +1.6 2,272,764 + -0.4 2,272,764 + +0.5 2,272,764 + -0.8 2,272,764 + -1.2 2,272,764 + +0.9 2,272,764 + -0.8 2,272,764 + -2.1 2,272,764 + -0.1 2,272,765 - -0.0 2,272,765 - -2.3 2,272,765 - -0.5 2,272,765 - -0.5 2,272,765 - +1.7 2,272,765 - -1.1 2,272,765 - +0.3 2,272,765 - -1.1 2,272,765 - -0.5 2,272,765 - -0.4 2,272,765 - +1.2 2,272,765 - +0.6 2,272,765 - +0.9 2,272,765 - +0.3 2,272,765 - +0.5 2,272,904 + +0.2 2,272,904 + -0.5 2,272,905 - +0.0 2,272,905 - +0.7 2,272,905 - -0.8 2,272,914 - -0.3 2,272,914 - -1.3 2,272,914 - -0.3 2,273,117 + -1.2 2,273,117 + -1.5 2,273,139 + +0.2 2,273,140 - -2.0 2,273,140 - -0.1 2,273,145 - -0.4 2,273,343 + MPMX19_02172 0.16 +0.7 2,273,344 - MPMX19_02172 0.16 -1.4 2,273,344 - MPMX19_02172 0.16 +0.6 2,273,344 - MPMX19_02172 0.16 +1.4 2,273,344 - MPMX19_02172 0.16 +0.2 2,273,507 + MPMX19_02172 0.33 +0.7 2,273,507 + MPMX19_02172 0.33 -0.1 2,273,507 + MPMX19_02172 0.33 -1.0 2,273,507 + MPMX19_02172 0.33 -1.0 2,273,507 + MPMX19_02172 0.33 +1.0 2,273,507 + MPMX19_02172 0.33 +0.4 2,273,507 + MPMX19_02172 0.33 +0.0 2,273,507 + MPMX19_02172 0.33 +1.6 2,273,508 - MPMX19_02172 0.33 -0.1 2,273,508 - MPMX19_02172 0.33 -2.8 2,273,508 - MPMX19_02172 0.33 +0.1 2,273,508 - MPMX19_02172 0.33 +0.8 2,273,508 - MPMX19_02172 0.33 +0.7 2,273,508 - MPMX19_02172 0.33 -0.5 2,273,844 + MPMX19_02172 0.66 +0.0 2,273,844 + MPMX19_02172 0.66 -1.2 2,274,147 - -0.4 2,274,147 - -1.4 2,274,147 - -0.8 2,274,201 + -1.3 2,274,201 + -0.6 2,274,201 + -1.2 2,274,201 + -0.4 2,274,201 + +0.6 2,274,201 + +2.0 2,274,201 + -0.5 2,274,202 - -0.2 2,274,202 - -0.8 2,274,202 - -0.1 2,274,202 - +0.3 2,274,202 - -1.0 2,274,202 - +0.7 2,274,215 + -1.9 2,274,215 + -0.5 2,274,216 - -0.2 2,274,256 - -1.5 2,274,261 + -0.2 2,274,261 + -1.6 2,274,261 + -0.3 2,274,261 + +0.5 2,274,262 - +0.4 2,274,262 - -1.7 2,274,262 - -1.4 2,274,389 + +0.3 2,274,389 + -0.1 2,274,389 + -1.9 2,274,389 + -0.5 2,274,389 + +0.5 2,274,389 + -0.1 2,274,389 + +0.7 2,274,389 + -1.8 2,274,389 + -1.1 2,274,390 - -0.7 2,274,390 - -1.1 2,274,390 - -1.3 2,274,390 - +0.0 2,274,390 - -1.5 2,274,390 - +1.0 2,274,390 - +0.7 2,274,390 - -0.8 2,274,390 - +1.9 2,274,390 - -0.4 2,274,401 + +0.2 2,274,401 + -1.0 2,274,402 - +0.3
Or see this region's nucleotide sequence