Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02150

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02149 and MPMX19_02150 are separated by 91 nucleotidesMPMX19_02150 and MPMX19_02151 overlap by 4 nucleotides MPMX19_02148: MPMX19_02148 - hypothetical protein, at 2,245,279 to 2,245,791 _02148 MPMX19_02149: MPMX19_02149 - hypothetical protein, at 2,245,778 to 2,246,692 _02149 MPMX19_02150: MPMX19_02150 - Acylphosphatase, at 2,246,784 to 2,247,074 _02150 MPMX19_02151: MPMX19_02151 - Long-chain-fatty-acid--CoA ligase, at 2,247,071 to 2,248,816 _02151 Position (kb) 2246 2247 2248Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2246.090 kb on + strand, within MPMX19_02149at 2246.091 kb on - strand, within MPMX19_02149at 2246.091 kb on - strand, within MPMX19_02149at 2246.091 kb on - strand, within MPMX19_02149at 2246.774 kb on - strandat 2247.010 kb on + strand, within MPMX19_02150at 2247.011 kb on - strand, within MPMX19_02150at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.273 kb on + strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.274 kb on - strand, within MPMX19_02151at 2247.297 kb on + strand, within MPMX19_02151at 2247.297 kb on + strand, within MPMX19_02151at 2247.298 kb on - strand, within MPMX19_02151at 2247.298 kb on - strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.348 kb on + strand, within MPMX19_02151at 2247.349 kb on - strand, within MPMX19_02151at 2247.349 kb on - strand, within MPMX19_02151at 2247.349 kb on - strand, within MPMX19_02151at 2247.349 kb on - strand, within MPMX19_02151at 2247.349 kb on - strand, within MPMX19_02151at 2247.349 kb on - strand, within MPMX19_02151at 2247.349 kb on - strand, within MPMX19_02151at 2247.375 kb on + strand, within MPMX19_02151at 2247.375 kb on + strand, within MPMX19_02151at 2247.375 kb on + strand, within MPMX19_02151at 2247.375 kb on + strand, within MPMX19_02151at 2247.376 kb on - strand, within MPMX19_02151at 2247.376 kb on - strand, within MPMX19_02151at 2247.376 kb on - strand, within MPMX19_02151at 2247.376 kb on - strand, within MPMX19_02151at 2247.376 kb on - strand, within MPMX19_02151at 2247.376 kb on - strand, within MPMX19_02151at 2247.432 kb on + strand, within MPMX19_02151at 2247.432 kb on + strand, within MPMX19_02151at 2247.432 kb on + strand, within MPMX19_02151at 2247.432 kb on + strand, within MPMX19_02151at 2247.432 kb on + strand, within MPMX19_02151at 2247.432 kb on + strand, within MPMX19_02151at 2247.432 kb on + strand, within MPMX19_02151at 2247.433 kb on - strand, within MPMX19_02151at 2247.433 kb on - strand, within MPMX19_02151at 2247.519 kb on + strand, within MPMX19_02151at 2247.519 kb on + strand, within MPMX19_02151at 2247.519 kb on + strand, within MPMX19_02151at 2247.519 kb on + strand, within MPMX19_02151at 2247.519 kb on + strand, within MPMX19_02151at 2247.519 kb on + strand, within MPMX19_02151at 2247.519 kb on + strand, within MPMX19_02151at 2247.519 kb on + strand, within MPMX19_02151at 2247.520 kb on - strand, within MPMX19_02151at 2247.520 kb on - strand, within MPMX19_02151at 2247.520 kb on - strand, within MPMX19_02151at 2247.520 kb on - strand, within MPMX19_02151at 2247.520 kb on - strand, within MPMX19_02151at 2247.520 kb on - strand, within MPMX19_02151at 2247.652 kb on + strand, within MPMX19_02151at 2247.652 kb on + strand, within MPMX19_02151at 2247.652 kb on + strand, within MPMX19_02151at 2247.652 kb on + strand, within MPMX19_02151at 2247.652 kb on + strand, within MPMX19_02151at 2247.652 kb on + strand, within MPMX19_02151at 2247.652 kb on + strand, within MPMX19_02151at 2247.652 kb on + strand, within MPMX19_02151at 2247.653 kb on - strand, within MPMX19_02151at 2247.653 kb on - strand, within MPMX19_02151at 2247.653 kb on - strand, within MPMX19_02151at 2247.653 kb on - strand, within MPMX19_02151at 2247.653 kb on - strand, within MPMX19_02151at 2247.711 kb on + strand, within MPMX19_02151at 2247.712 kb on - strand, within MPMX19_02151at 2247.712 kb on - strand, within MPMX19_02151at 2247.712 kb on - strand, within MPMX19_02151at 2247.712 kb on - strand, within MPMX19_02151at 2247.712 kb on - strand, within MPMX19_02151at 2247.712 kb on - strand, within MPMX19_02151at 2247.816 kb on + strand, within MPMX19_02151at 2247.816 kb on + strand, within MPMX19_02151at 2247.816 kb on + strand, within MPMX19_02151at 2247.816 kb on + strand, within MPMX19_02151at 2247.816 kb on + strand, within MPMX19_02151at 2247.816 kb on + strand, within MPMX19_02151at 2247.816 kb on + strand, within MPMX19_02151at 2247.816 kb on + strand, within MPMX19_02151at 2247.817 kb on - strand, within MPMX19_02151at 2247.817 kb on - strand, within MPMX19_02151at 2247.817 kb on - strand, within MPMX19_02151at 2247.817 kb on - strand, within MPMX19_02151at 2247.817 kb on - strand, within MPMX19_02151at 2247.817 kb on - strand, within MPMX19_02151at 2247.817 kb on - strand, within MPMX19_02151at 2247.817 kb on - strand, within MPMX19_02151at 2247.817 kb on - strand, within MPMX19_02151at 2247.817 kb on - strand, within MPMX19_02151at 2247.817 kb on - strand, within MPMX19_02151at 2247.817 kb on - strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.852 kb on + strand, within MPMX19_02151at 2247.853 kb on - strand, within MPMX19_02151at 2247.853 kb on - strand, within MPMX19_02151at 2247.853 kb on - strand, within MPMX19_02151at 2247.853 kb on - strand, within MPMX19_02151at 2247.853 kb on - strand, within MPMX19_02151at 2247.853 kb on - strand, within MPMX19_02151at 2247.853 kb on - strand, within MPMX19_02151at 2247.853 kb on - strand, within MPMX19_02151at 2247.853 kb on - strand, within MPMX19_02151at 2247.853 kb on - strand, within MPMX19_02151at 2247.853 kb on - strand, within MPMX19_02151

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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2,246,090 + MPMX19_02149 0.34 -0.2
2,246,091 - MPMX19_02149 0.34 -0.3
2,246,091 - MPMX19_02149 0.34 +0.0
2,246,091 - MPMX19_02149 0.34 -1.1
2,246,774 - +0.2
2,247,010 + MPMX19_02150 0.78 -0.7
2,247,011 - MPMX19_02150 0.78 +0.5
2,247,273 + MPMX19_02151 0.12 -1.2
2,247,273 + MPMX19_02151 0.12 -1.5
2,247,273 + MPMX19_02151 0.12 -0.5
2,247,273 + MPMX19_02151 0.12 +1.5
2,247,273 + MPMX19_02151 0.12 -1.5
2,247,273 + MPMX19_02151 0.12 -0.1
2,247,273 + MPMX19_02151 0.12 +0.5
2,247,273 + MPMX19_02151 0.12 +1.4
2,247,273 + MPMX19_02151 0.12 -0.9
2,247,273 + MPMX19_02151 0.12 -0.7
2,247,273 + MPMX19_02151 0.12 -0.5
2,247,273 + MPMX19_02151 0.12 -0.5
2,247,273 + MPMX19_02151 0.12 -0.4
2,247,273 + MPMX19_02151 0.12 +1.7
2,247,273 + MPMX19_02151 0.12 -0.1
2,247,273 + MPMX19_02151 0.12 +1.5
2,247,273 + MPMX19_02151 0.12 -0.7
2,247,273 + MPMX19_02151 0.12 +2.8
2,247,273 + MPMX19_02151 0.12 -0.3
2,247,273 + MPMX19_02151 0.12 +0.3
2,247,273 + MPMX19_02151 0.12 +0.3
2,247,273 + MPMX19_02151 0.12 +1.5
2,247,273 + MPMX19_02151 0.12 -1.4
2,247,273 + MPMX19_02151 0.12 +0.2
2,247,273 + MPMX19_02151 0.12 -0.8
2,247,273 + MPMX19_02151 0.12 +1.1
2,247,273 + MPMX19_02151 0.12 -0.3
2,247,273 + MPMX19_02151 0.12 -0.3
2,247,273 + MPMX19_02151 0.12 +0.4
2,247,274 - MPMX19_02151 0.12 -1.4
2,247,274 - MPMX19_02151 0.12 -2.0
2,247,274 - MPMX19_02151 0.12 +0.2
2,247,274 - MPMX19_02151 0.12 -1.1
2,247,274 - MPMX19_02151 0.12 -0.6
2,247,274 - MPMX19_02151 0.12 -0.3
2,247,274 - MPMX19_02151 0.12 -1.4
2,247,274 - MPMX19_02151 0.12 +0.0
2,247,274 - MPMX19_02151 0.12 +0.6
2,247,274 - MPMX19_02151 0.12 -1.1
2,247,274 - MPMX19_02151 0.12 -1.1
2,247,274 - MPMX19_02151 0.12 -0.2
2,247,274 - MPMX19_02151 0.12 +2.0
2,247,274 - MPMX19_02151 0.12 +0.0
2,247,274 - MPMX19_02151 0.12 -0.7
2,247,274 - MPMX19_02151 0.12 -0.5
2,247,274 - MPMX19_02151 0.12 -2.2
2,247,274 - MPMX19_02151 0.12 +0.3
2,247,274 - MPMX19_02151 0.12 +0.7
2,247,274 - MPMX19_02151 0.12 +0.5
2,247,274 - MPMX19_02151 0.12 -1.3
2,247,274 - MPMX19_02151 0.12 +0.8
2,247,274 - MPMX19_02151 0.12 -0.6
2,247,274 - MPMX19_02151 0.12 +0.1
2,247,274 - MPMX19_02151 0.12 +1.4
2,247,274 - MPMX19_02151 0.12 -1.1
2,247,274 - MPMX19_02151 0.12 -2.0
2,247,297 + MPMX19_02151 0.13 -1.6
2,247,297 + MPMX19_02151 0.13 +0.2
2,247,298 - MPMX19_02151 0.13 +1.3
2,247,298 - MPMX19_02151 0.13 +0.1
2,247,348 + MPMX19_02151 0.16 -0.7
2,247,348 + MPMX19_02151 0.16 -1.1
2,247,348 + MPMX19_02151 0.16 -1.2
2,247,348 + MPMX19_02151 0.16 +0.9
2,247,348 + MPMX19_02151 0.16 +0.0
2,247,348 + MPMX19_02151 0.16 +0.8
2,247,348 + MPMX19_02151 0.16 +0.2
2,247,348 + MPMX19_02151 0.16 -0.3
2,247,348 + MPMX19_02151 0.16 +0.5
2,247,348 + MPMX19_02151 0.16 -0.5
2,247,348 + MPMX19_02151 0.16 +2.7
2,247,348 + MPMX19_02151 0.16 -0.4
2,247,348 + MPMX19_02151 0.16 +0.0
2,247,349 - MPMX19_02151 0.16 -0.1
2,247,349 - MPMX19_02151 0.16 +0.9
2,247,349 - MPMX19_02151 0.16 -0.6
2,247,349 - MPMX19_02151 0.16 -0.6
2,247,349 - MPMX19_02151 0.16 -1.1
2,247,349 - MPMX19_02151 0.16 -0.1
2,247,349 - MPMX19_02151 0.16 +0.0
2,247,375 + MPMX19_02151 0.17 -1.0
2,247,375 + MPMX19_02151 0.17 +0.0
2,247,375 + MPMX19_02151 0.17 -1.5
2,247,375 + MPMX19_02151 0.17 -1.0
2,247,376 - MPMX19_02151 0.17 -1.0
2,247,376 - MPMX19_02151 0.17 -0.2
2,247,376 - MPMX19_02151 0.17 +0.7
2,247,376 - MPMX19_02151 0.17 +0.3
2,247,376 - MPMX19_02151 0.17 -1.7
2,247,376 - MPMX19_02151 0.17 +0.3
2,247,432 + MPMX19_02151 0.21 -1.3
2,247,432 + MPMX19_02151 0.21 -1.0
2,247,432 + MPMX19_02151 0.21 -0.4
2,247,432 + MPMX19_02151 0.21 -0.3
2,247,432 + MPMX19_02151 0.21 -1.5
2,247,432 + MPMX19_02151 0.21 -0.0
2,247,432 + MPMX19_02151 0.21 -0.5
2,247,433 - MPMX19_02151 0.21 +0.0
2,247,433 - MPMX19_02151 0.21 -0.7
2,247,519 + MPMX19_02151 0.26 +0.0
2,247,519 + MPMX19_02151 0.26 -0.7
2,247,519 + MPMX19_02151 0.26 -1.4
2,247,519 + MPMX19_02151 0.26 -0.7
2,247,519 + MPMX19_02151 0.26 -0.3
2,247,519 + MPMX19_02151 0.26 -1.0
2,247,519 + MPMX19_02151 0.26 +0.2
2,247,519 + MPMX19_02151 0.26 -0.1
2,247,520 - MPMX19_02151 0.26 -0.1
2,247,520 - MPMX19_02151 0.26 -1.1
2,247,520 - MPMX19_02151 0.26 -0.6
2,247,520 - MPMX19_02151 0.26 -0.9
2,247,520 - MPMX19_02151 0.26 -0.1
2,247,520 - MPMX19_02151 0.26 -0.3
2,247,652 + MPMX19_02151 0.33 -1.3
2,247,652 + MPMX19_02151 0.33 +1.2
2,247,652 + MPMX19_02151 0.33 -1.5
2,247,652 + MPMX19_02151 0.33 +0.6
2,247,652 + MPMX19_02151 0.33 -1.9
2,247,652 + MPMX19_02151 0.33 -0.5
2,247,652 + MPMX19_02151 0.33 -2.0
2,247,652 + MPMX19_02151 0.33 -0.8
2,247,653 - MPMX19_02151 0.33 +0.5
2,247,653 - MPMX19_02151 0.33 -0.4
2,247,653 - MPMX19_02151 0.33 -1.0
2,247,653 - MPMX19_02151 0.33 +1.3
2,247,653 - MPMX19_02151 0.33 +0.2
2,247,711 + MPMX19_02151 0.37 -1.1
2,247,712 - MPMX19_02151 0.37 -0.4
2,247,712 - MPMX19_02151 0.37 +0.3
2,247,712 - MPMX19_02151 0.37 -0.3
2,247,712 - MPMX19_02151 0.37 +0.7
2,247,712 - MPMX19_02151 0.37 +1.2
2,247,712 - MPMX19_02151 0.37 -0.8
2,247,816 + MPMX19_02151 0.43 -1.0
2,247,816 + MPMX19_02151 0.43 -0.5
2,247,816 + MPMX19_02151 0.43 +0.2
2,247,816 + MPMX19_02151 0.43 +0.5
2,247,816 + MPMX19_02151 0.43 -0.3
2,247,816 + MPMX19_02151 0.43 -0.1
2,247,816 + MPMX19_02151 0.43 -1.3
2,247,816 + MPMX19_02151 0.43 -1.6
2,247,817 - MPMX19_02151 0.43 -0.3
2,247,817 - MPMX19_02151 0.43 +0.0
2,247,817 - MPMX19_02151 0.43 -0.5
2,247,817 - MPMX19_02151 0.43 +0.0
2,247,817 - MPMX19_02151 0.43 -0.1
2,247,817 - MPMX19_02151 0.43 +0.1
2,247,817 - MPMX19_02151 0.43 +0.0
2,247,817 - MPMX19_02151 0.43 -0.4
2,247,817 - MPMX19_02151 0.43 -0.3
2,247,817 - MPMX19_02151 0.43 -0.8
2,247,817 - MPMX19_02151 0.43 -0.2
2,247,817 - MPMX19_02151 0.43 +0.1
2,247,852 + MPMX19_02151 0.45 -0.5
2,247,852 + MPMX19_02151 0.45 -1.1
2,247,852 + MPMX19_02151 0.45 -0.1
2,247,852 + MPMX19_02151 0.45 +0.0
2,247,852 + MPMX19_02151 0.45 +0.1
2,247,852 + MPMX19_02151 0.45 +0.3
2,247,852 + MPMX19_02151 0.45 +0.2
2,247,852 + MPMX19_02151 0.45 +0.6
2,247,852 + MPMX19_02151 0.45 +0.3
2,247,852 + MPMX19_02151 0.45 -1.0
2,247,852 + MPMX19_02151 0.45 +0.2
2,247,852 + MPMX19_02151 0.45 +1.0
2,247,852 + MPMX19_02151 0.45 -1.0
2,247,852 + MPMX19_02151 0.45 +0.7
2,247,852 + MPMX19_02151 0.45 -1.3
2,247,853 - MPMX19_02151 0.45 +0.3
2,247,853 - MPMX19_02151 0.45 -1.4
2,247,853 - MPMX19_02151 0.45 -1.7
2,247,853 - MPMX19_02151 0.45 -0.5
2,247,853 - MPMX19_02151 0.45 +1.0
2,247,853 - MPMX19_02151 0.45 -1.0
2,247,853 - MPMX19_02151 0.45 -1.2
2,247,853 - MPMX19_02151 0.45 -0.1
2,247,853 - MPMX19_02151 0.45 -0.3
2,247,853 - MPMX19_02151 0.45 +0.0
2,247,853 - MPMX19_02151 0.45 -0.5

Or see this region's nucleotide sequence