Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02032 and MPMX19_02033 are separated by 94 nucleotides MPMX19_02033 and MPMX19_02034 are separated by 128 nucleotides MPMX19_02034 and MPMX19_02035 are separated by 53 nucleotides
MPMX19_02032: MPMX19_02032 - UDP-3-O-acylglucosamine N-acyltransferase, at 2,126,285 to 2,127,415
_02032
MPMX19_02033: MPMX19_02033 - hypothetical protein, at 2,127,510 to 2,127,974
_02033
MPMX19_02034: MPMX19_02034 - Peptidoglycan-associated lipoprotein, at 2,128,103 to 2,128,786
_02034
MPMX19_02035: MPMX19_02035 - C4-dicarboxylate-binding periplasmic protein DctP, at 2,128,840 to 2,129,877
_02035
Position (kb)
2128
2129 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2127.628 kb on + strand, within MPMX19_02033 at 2127.628 kb on + strand, within MPMX19_02033 at 2127.628 kb on + strand, within MPMX19_02033 at 2127.628 kb on + strand, within MPMX19_02033 at 2127.628 kb on + strand, within MPMX19_02033 at 2127.628 kb on + strand, within MPMX19_02033 at 2127.628 kb on + strand, within MPMX19_02033 at 2127.629 kb on - strand, within MPMX19_02033 at 2127.629 kb on - strand, within MPMX19_02033 at 2127.629 kb on - strand, within MPMX19_02033 at 2127.629 kb on - strand, within MPMX19_02033 at 2127.629 kb on - strand, within MPMX19_02033 at 2127.629 kb on - strand, within MPMX19_02033 at 2127.631 kb on + strand, within MPMX19_02033 at 2127.631 kb on + strand, within MPMX19_02033 at 2127.631 kb on + strand, within MPMX19_02033 at 2127.631 kb on + strand, within MPMX19_02033 at 2127.631 kb on + strand, within MPMX19_02033 at 2127.631 kb on + strand, within MPMX19_02033 at 2127.631 kb on + strand, within MPMX19_02033 at 2127.631 kb on + strand, within MPMX19_02033 at 2127.631 kb on + strand, within MPMX19_02033 at 2127.631 kb on + strand, within MPMX19_02033 at 2127.631 kb on + strand, within MPMX19_02033 at 2127.632 kb on - strand, within MPMX19_02033 at 2127.632 kb on - strand, within MPMX19_02033 at 2127.632 kb on - strand, within MPMX19_02033 at 2127.632 kb on - strand, within MPMX19_02033 at 2127.632 kb on - strand, within MPMX19_02033 at 2127.632 kb on - strand, within MPMX19_02033 at 2127.632 kb on - strand, within MPMX19_02033 at 2127.632 kb on - strand, within MPMX19_02033 at 2127.632 kb on - strand, within MPMX19_02033 at 2127.632 kb on - strand, within MPMX19_02033 at 2127.632 kb on - strand, within MPMX19_02033 at 2127.706 kb on + strand, within MPMX19_02033 at 2127.706 kb on + strand, within MPMX19_02033 at 2127.706 kb on + strand, within MPMX19_02033 at 2127.706 kb on + strand, within MPMX19_02033 at 2127.707 kb on - strand, within MPMX19_02033 at 2127.707 kb on - strand, within MPMX19_02033 at 2127.775 kb on + strand, within MPMX19_02033 at 2127.775 kb on + strand, within MPMX19_02033 at 2127.775 kb on + strand, within MPMX19_02033 at 2127.775 kb on + strand, within MPMX19_02033 at 2127.776 kb on - strand, within MPMX19_02033 at 2127.776 kb on - strand, within MPMX19_02033 at 2127.841 kb on + strand, within MPMX19_02033 at 2127.841 kb on + strand, within MPMX19_02033 at 2127.841 kb on + strand, within MPMX19_02033 at 2127.841 kb on + strand, within MPMX19_02033 at 2127.841 kb on + strand, within MPMX19_02033 at 2127.841 kb on + strand, within MPMX19_02033 at 2127.841 kb on + strand, within MPMX19_02033 at 2127.841 kb on + strand, within MPMX19_02033 at 2127.842 kb on - strand, within MPMX19_02033 at 2127.842 kb on - strand, within MPMX19_02033 at 2127.842 kb on - strand, within MPMX19_02033 at 2128.036 kb on + strand at 2128.036 kb on + strand at 2128.037 kb on - strand at 2128.236 kb on + strand, within MPMX19_02034 at 2128.236 kb on + strand, within MPMX19_02034 at 2128.236 kb on + strand, within MPMX19_02034 at 2128.236 kb on + strand, within MPMX19_02034 at 2128.236 kb on + strand, within MPMX19_02034 at 2128.237 kb on - strand, within MPMX19_02034 at 2128.237 kb on - strand, within MPMX19_02034 at 2128.237 kb on - strand, within MPMX19_02034 at 2128.237 kb on - strand, within MPMX19_02034 at 2128.790 kb on + strand at 2128.791 kb on - strand at 2128.806 kb on - strand at 2128.806 kb on - strand at 2128.814 kb on + strand at 2128.814 kb on + strand at 2128.814 kb on + strand at 2128.815 kb on - strand at 2128.816 kb on + strand at 2128.930 kb on + strand at 2128.930 kb on + strand at 2128.930 kb on + strand at 2128.930 kb on + strand at 2128.930 kb on + strand at 2128.930 kb on + strand at 2128.930 kb on + strand at 2128.930 kb on + strand at 2128.930 kb on + strand at 2128.930 kb on + strand at 2128.931 kb on - strand at 2128.931 kb on - strand at 2128.931 kb on - strand at 2128.942 kb on + strand at 2128.942 kb on + strand at 2128.942 kb on + strand at 2128.943 kb on - strand at 2128.943 kb on - strand at 2129.050 kb on + strand, within MPMX19_02035 at 2129.050 kb on + strand, within MPMX19_02035 at 2129.050 kb on + strand, within MPMX19_02035 at 2129.050 kb on + strand, within MPMX19_02035 at 2129.050 kb on + strand, within MPMX19_02035 at 2129.050 kb on + strand, within MPMX19_02035 at 2129.050 kb on + strand, within MPMX19_02035 at 2129.050 kb on + strand, within MPMX19_02035 at 2129.050 kb on + strand, within MPMX19_02035 at 2129.050 kb on + strand, within MPMX19_02035 at 2129.050 kb on + strand, within MPMX19_02035 at 2129.050 kb on + strand, within MPMX19_02035 at 2129.050 kb on + strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.051 kb on - strand, within MPMX19_02035 at 2129.392 kb on + strand, within MPMX19_02035 at 2129.392 kb on + strand, within MPMX19_02035 at 2129.392 kb on + strand, within MPMX19_02035 at 2129.392 kb on + strand, within MPMX19_02035 at 2129.393 kb on - strand, within MPMX19_02035 at 2129.560 kb on + strand, within MPMX19_02035 at 2129.560 kb on + strand, within MPMX19_02035 at 2129.560 kb on + strand, within MPMX19_02035 at 2129.560 kb on + strand, within MPMX19_02035 at 2129.560 kb on + strand, within MPMX19_02035 at 2129.560 kb on + strand, within MPMX19_02035 at 2129.560 kb on + strand, within MPMX19_02035 at 2129.560 kb on + strand, within MPMX19_02035 at 2129.560 kb on + strand, within MPMX19_02035 at 2129.560 kb on + strand, within MPMX19_02035 at 2129.561 kb on - strand, within MPMX19_02035 at 2129.561 kb on - strand, within MPMX19_02035 at 2129.561 kb on - strand, within MPMX19_02035 at 2129.561 kb on - strand, within MPMX19_02035 at 2129.561 kb on - strand, within MPMX19_02035 at 2129.561 kb on - strand, within MPMX19_02035 at 2129.561 kb on - strand, within MPMX19_02035 at 2129.561 kb on - strand, within MPMX19_02035 at 2129.561 kb on - strand, within MPMX19_02035 at 2129.561 kb on - strand, within MPMX19_02035 at 2129.561 kb on - strand, within MPMX19_02035
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,127,628 + MPMX19_02033 0.25 +1.0 2,127,628 + MPMX19_02033 0.25 -2.1 2,127,628 + MPMX19_02033 0.25 -0.3 2,127,628 + MPMX19_02033 0.25 -2.2 2,127,628 + MPMX19_02033 0.25 -0.7 2,127,628 + MPMX19_02033 0.25 +0.4 2,127,628 + MPMX19_02033 0.25 -1.3 2,127,629 - MPMX19_02033 0.26 -0.8 2,127,629 - MPMX19_02033 0.26 -3.4 2,127,629 - MPMX19_02033 0.26 +2.0 2,127,629 - MPMX19_02033 0.26 +0.8 2,127,629 - MPMX19_02033 0.26 -0.0 2,127,629 - MPMX19_02033 0.26 -0.4 2,127,631 + MPMX19_02033 0.26 -1.7 2,127,631 + MPMX19_02033 0.26 -1.2 2,127,631 + MPMX19_02033 0.26 -1.0 2,127,631 + MPMX19_02033 0.26 -0.2 2,127,631 + MPMX19_02033 0.26 -0.8 2,127,631 + MPMX19_02033 0.26 -0.6 2,127,631 + MPMX19_02033 0.26 -0.8 2,127,631 + MPMX19_02033 0.26 -0.5 2,127,631 + MPMX19_02033 0.26 +0.4 2,127,631 + MPMX19_02033 0.26 -0.8 2,127,631 + MPMX19_02033 0.26 +0.3 2,127,632 - MPMX19_02033 0.26 -0.0 2,127,632 - MPMX19_02033 0.26 +0.3 2,127,632 - MPMX19_02033 0.26 -2.0 2,127,632 - MPMX19_02033 0.26 +0.1 2,127,632 - MPMX19_02033 0.26 -1.2 2,127,632 - MPMX19_02033 0.26 +0.2 2,127,632 - MPMX19_02033 0.26 -1.0 2,127,632 - MPMX19_02033 0.26 -1.8 2,127,632 - MPMX19_02033 0.26 +0.1 2,127,632 - MPMX19_02033 0.26 +1.2 2,127,632 - MPMX19_02033 0.26 -0.3 2,127,706 + MPMX19_02033 0.42 +0.1 2,127,706 + MPMX19_02033 0.42 +0.4 2,127,706 + MPMX19_02033 0.42 -0.9 2,127,706 + MPMX19_02033 0.42 +1.0 2,127,707 - MPMX19_02033 0.42 -0.1 2,127,707 - MPMX19_02033 0.42 -0.4 2,127,775 + MPMX19_02033 0.57 -0.4 2,127,775 + MPMX19_02033 0.57 +1.0 2,127,775 + MPMX19_02033 0.57 -1.3 2,127,775 + MPMX19_02033 0.57 +1.2 2,127,776 - MPMX19_02033 0.57 +0.1 2,127,776 - MPMX19_02033 0.57 -0.7 2,127,841 + MPMX19_02033 0.71 +0.1 2,127,841 + MPMX19_02033 0.71 -1.8 2,127,841 + MPMX19_02033 0.71 -0.5 2,127,841 + MPMX19_02033 0.71 +0.7 2,127,841 + MPMX19_02033 0.71 -1.1 2,127,841 + MPMX19_02033 0.71 -1.8 2,127,841 + MPMX19_02033 0.71 +0.2 2,127,841 + MPMX19_02033 0.71 +0.2 2,127,842 - MPMX19_02033 0.71 +0.3 2,127,842 - MPMX19_02033 0.71 -0.2 2,127,842 - MPMX19_02033 0.71 -0.7 2,128,036 + -1.6 2,128,036 + +0.4 2,128,037 - -0.6 2,128,236 + MPMX19_02034 0.19 -1.6 2,128,236 + MPMX19_02034 0.19 -0.3 2,128,236 + MPMX19_02034 0.19 -0.8 2,128,236 + MPMX19_02034 0.19 -0.7 2,128,236 + MPMX19_02034 0.19 -0.6 2,128,237 - MPMX19_02034 0.20 +0.2 2,128,237 - MPMX19_02034 0.20 -0.6 2,128,237 - MPMX19_02034 0.20 +1.4 2,128,237 - MPMX19_02034 0.20 -1.1 2,128,790 + -1.6 2,128,791 - -1.1 2,128,806 - -1.2 2,128,806 - +0.3 2,128,814 + +0.3 2,128,814 + -1.2 2,128,814 + -0.6 2,128,815 - +1.3 2,128,816 + -0.5 2,128,930 + -0.9 2,128,930 + +0.3 2,128,930 + -0.0 2,128,930 + +0.3 2,128,930 + -0.4 2,128,930 + +0.2 2,128,930 + -1.9 2,128,930 + +0.8 2,128,930 + -1.4 2,128,930 + +0.3 2,128,931 - -2.5 2,128,931 - -0.6 2,128,931 - -1.1 2,128,942 + +0.5 2,128,942 + -0.0 2,128,942 + -1.3 2,128,943 - -0.8 2,128,943 - +1.0 2,129,050 + MPMX19_02035 0.20 -2.5 2,129,050 + MPMX19_02035 0.20 +0.4 2,129,050 + MPMX19_02035 0.20 +0.6 2,129,050 + MPMX19_02035 0.20 +0.3 2,129,050 + MPMX19_02035 0.20 +0.9 2,129,050 + MPMX19_02035 0.20 +1.7 2,129,050 + MPMX19_02035 0.20 +0.3 2,129,050 + MPMX19_02035 0.20 +0.7 2,129,050 + MPMX19_02035 0.20 -0.8 2,129,050 + MPMX19_02035 0.20 +0.7 2,129,050 + MPMX19_02035 0.20 +0.3 2,129,050 + MPMX19_02035 0.20 +0.2 2,129,050 + MPMX19_02035 0.20 -0.4 2,129,051 - MPMX19_02035 0.20 +0.7 2,129,051 - MPMX19_02035 0.20 -0.9 2,129,051 - MPMX19_02035 0.20 -0.3 2,129,051 - MPMX19_02035 0.20 -1.2 2,129,051 - MPMX19_02035 0.20 +1.7 2,129,051 - MPMX19_02035 0.20 -0.5 2,129,051 - MPMX19_02035 0.20 -1.3 2,129,051 - MPMX19_02035 0.20 +1.4 2,129,051 - MPMX19_02035 0.20 -0.0 2,129,051 - MPMX19_02035 0.20 -0.5 2,129,051 - MPMX19_02035 0.20 -1.2 2,129,051 - MPMX19_02035 0.20 -0.3 2,129,051 - MPMX19_02035 0.20 -0.3 2,129,051 - MPMX19_02035 0.20 -1.4 2,129,392 + MPMX19_02035 0.53 +0.5 2,129,392 + MPMX19_02035 0.53 +0.2 2,129,392 + MPMX19_02035 0.53 +0.1 2,129,392 + MPMX19_02035 0.53 -0.5 2,129,393 - MPMX19_02035 0.53 -0.1 2,129,560 + MPMX19_02035 0.69 +0.2 2,129,560 + MPMX19_02035 0.69 -0.6 2,129,560 + MPMX19_02035 0.69 +0.6 2,129,560 + MPMX19_02035 0.69 +1.3 2,129,560 + MPMX19_02035 0.69 -1.9 2,129,560 + MPMX19_02035 0.69 -0.4 2,129,560 + MPMX19_02035 0.69 -1.7 2,129,560 + MPMX19_02035 0.69 +0.5 2,129,560 + MPMX19_02035 0.69 -1.1 2,129,560 + MPMX19_02035 0.69 -0.7 2,129,561 - MPMX19_02035 0.69 -0.1 2,129,561 - MPMX19_02035 0.69 +1.3 2,129,561 - MPMX19_02035 0.69 +0.5 2,129,561 - MPMX19_02035 0.69 +0.6 2,129,561 - MPMX19_02035 0.69 +0.0 2,129,561 - MPMX19_02035 0.69 -0.2 2,129,561 - MPMX19_02035 0.69 -0.8 2,129,561 - MPMX19_02035 0.69 -1.5 2,129,561 - MPMX19_02035 0.69 -0.4 2,129,561 - MPMX19_02035 0.69 +0.4 2,129,561 - MPMX19_02035 0.69 -0.0
Or see this region's nucleotide sequence