Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01853 and MPMX19_01854 are separated by 4 nucleotides MPMX19_01854 and MPMX19_01855 are separated by 221 nucleotides MPMX19_01855 and MPMX19_01856 are separated by 119 nucleotides MPMX19_01856 and MPMX19_01857 are separated by 158 nucleotides
MPMX19_01853: MPMX19_01853 - hypothetical protein, at 1,931,381 to 1,932,436
_01853
MPMX19_01854: MPMX19_01854 - hypothetical protein, at 1,932,441 to 1,933,085
_01854
MPMX19_01855: MPMX19_01855 - putative intracellular septation protein A, at 1,933,307 to 1,933,873
_01855
MPMX19_01856: MPMX19_01856 - Sec-independent protein translocase protein TatA, at 1,933,993 to 1,934,301
_01856
MPMX19_01857: MPMX19_01857 - hypothetical protein, at 1,934,460 to 1,935,614
_01857
Position (kb) 1933
1934 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1932.329 kb on + strand, within MPMX19_01853 at 1932.338 kb on + strand at 1932.338 kb on + strand at 1932.350 kb on + strand at 1932.350 kb on + strand at 1932.351 kb on - strand at 1932.351 kb on - strand at 1932.404 kb on + strand at 1932.404 kb on + strand at 1932.404 kb on + strand at 1932.404 kb on + strand at 1932.404 kb on + strand at 1932.404 kb on + strand at 1932.404 kb on + strand at 1932.405 kb on - strand at 1932.405 kb on - strand at 1932.405 kb on - strand at 1932.841 kb on + strand, within MPMX19_01854 at 1932.841 kb on + strand, within MPMX19_01854 at 1932.841 kb on + strand, within MPMX19_01854 at 1932.841 kb on + strand, within MPMX19_01854 at 1932.841 kb on + strand, within MPMX19_01854 at 1932.841 kb on + strand, within MPMX19_01854 at 1932.842 kb on - strand, within MPMX19_01854 at 1932.842 kb on - strand, within MPMX19_01854 at 1932.842 kb on - strand, within MPMX19_01854 at 1932.842 kb on - strand, within MPMX19_01854 at 1932.842 kb on - strand, within MPMX19_01854 at 1932.842 kb on - strand, within MPMX19_01854 at 1932.842 kb on - strand, within MPMX19_01854 at 1932.844 kb on + strand, within MPMX19_01854 at 1932.844 kb on + strand, within MPMX19_01854 at 1932.844 kb on + strand, within MPMX19_01854 at 1932.844 kb on + strand, within MPMX19_01854 at 1932.845 kb on - strand, within MPMX19_01854 at 1932.845 kb on - strand, within MPMX19_01854 at 1932.845 kb on - strand, within MPMX19_01854 at 1932.845 kb on - strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.949 kb on + strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1932.950 kb on - strand, within MPMX19_01854 at 1933.138 kb on + strand at 1933.139 kb on - strand at 1933.209 kb on + strand at 1933.209 kb on + strand at 1933.209 kb on + strand at 1933.209 kb on + strand at 1933.209 kb on + strand at 1933.209 kb on + strand at 1933.209 kb on + strand at 1933.209 kb on + strand at 1933.209 kb on - strand at 1933.210 kb on - strand at 1933.210 kb on - strand at 1933.210 kb on - strand at 1933.210 kb on - strand at 1933.218 kb on + strand at 1933.218 kb on + strand at 1933.218 kb on + strand at 1933.218 kb on + strand at 1933.218 kb on + strand at 1933.219 kb on - strand at 1933.219 kb on - strand at 1933.219 kb on - strand at 1933.294 kb on + strand at 1933.294 kb on + strand at 1933.294 kb on + strand at 1933.294 kb on + strand at 1933.294 kb on + strand at 1933.295 kb on - strand at 1933.295 kb on - strand at 1933.295 kb on - strand at 1933.295 kb on - strand at 1933.295 kb on - strand at 1933.295 kb on - strand at 1933.984 kb on + strand at 1933.984 kb on + strand at 1933.984 kb on + strand at 1933.984 kb on + strand at 1933.984 kb on + strand at 1933.984 kb on + strand at 1933.984 kb on + strand at 1933.984 kb on + strand at 1933.984 kb on + strand at 1933.984 kb on + strand at 1933.984 kb on + strand at 1933.985 kb on - strand at 1933.985 kb on - strand at 1933.985 kb on - strand at 1933.985 kb on - strand at 1933.985 kb on - strand at 1933.985 kb on - strand at 1933.985 kb on - strand at 1933.985 kb on - strand at 1933.985 kb on - strand at 1934.368 kb on + strand at 1934.368 kb on + strand at 1934.368 kb on + strand at 1934.368 kb on + strand at 1934.368 kb on + strand at 1934.368 kb on + strand at 1934.368 kb on + strand at 1934.369 kb on - strand at 1934.369 kb on - strand at 1934.369 kb on - strand at 1934.369 kb on - strand at 1934.369 kb on - strand at 1934.369 kb on - strand at 1934.502 kb on + strand at 1934.502 kb on + strand at 1934.502 kb on + strand at 1934.664 kb on + strand, within MPMX19_01857 at 1934.664 kb on + strand, within MPMX19_01857 at 1934.664 kb on + strand, within MPMX19_01857 at 1934.664 kb on + strand, within MPMX19_01857 at 1934.664 kb on + strand, within MPMX19_01857 at 1934.664 kb on + strand, within MPMX19_01857 at 1934.665 kb on - strand, within MPMX19_01857 at 1934.665 kb on - strand, within MPMX19_01857 at 1934.665 kb on - strand, within MPMX19_01857 at 1934.665 kb on - strand, within MPMX19_01857 at 1934.665 kb on - strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.760 kb on + strand, within MPMX19_01857 at 1934.761 kb on - strand, within MPMX19_01857 at 1934.761 kb on - strand, within MPMX19_01857 at 1934.761 kb on - strand, within MPMX19_01857 at 1934.761 kb on - strand, within MPMX19_01857 at 1934.761 kb on - strand, within MPMX19_01857 at 1934.761 kb on - strand, within MPMX19_01857 at 1934.761 kb on - strand, within MPMX19_01857 at 1934.761 kb on - strand, within MPMX19_01857 at 1934.761 kb on - strand, within MPMX19_01857 at 1934.761 kb on - strand, within MPMX19_01857 at 1934.761 kb on - strand, within MPMX19_01857
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,932,329 + MPMX19_01853 0.90 +0.3 1,932,338 + -0.9 1,932,338 + +0.2 1,932,350 + +0.6 1,932,350 + -2.0 1,932,351 - -0.7 1,932,351 - +0.6 1,932,404 + -0.5 1,932,404 + -1.0 1,932,404 + +0.2 1,932,404 + -0.1 1,932,404 + +0.3 1,932,404 + +0.6 1,932,404 + +0.2 1,932,405 - -0.8 1,932,405 - +0.2 1,932,405 - -0.8 1,932,841 + MPMX19_01854 0.62 -0.4 1,932,841 + MPMX19_01854 0.62 +0.1 1,932,841 + MPMX19_01854 0.62 -0.6 1,932,841 + MPMX19_01854 0.62 +1.5 1,932,841 + MPMX19_01854 0.62 +0.1 1,932,841 + MPMX19_01854 0.62 +1.8 1,932,842 - MPMX19_01854 0.62 -0.0 1,932,842 - MPMX19_01854 0.62 +0.6 1,932,842 - MPMX19_01854 0.62 +1.1 1,932,842 - MPMX19_01854 0.62 +0.8 1,932,842 - MPMX19_01854 0.62 -1.9 1,932,842 - MPMX19_01854 0.62 -0.3 1,932,842 - MPMX19_01854 0.62 +0.1 1,932,844 + MPMX19_01854 0.62 -0.0 1,932,844 + MPMX19_01854 0.62 -0.1 1,932,844 + MPMX19_01854 0.62 +1.1 1,932,844 + MPMX19_01854 0.62 +1.5 1,932,845 - MPMX19_01854 0.63 -0.1 1,932,845 - MPMX19_01854 0.63 -0.0 1,932,845 - MPMX19_01854 0.63 +2.6 1,932,845 - MPMX19_01854 0.63 +0.0 1,932,949 + MPMX19_01854 0.79 +0.1 1,932,949 + MPMX19_01854 0.79 -0.8 1,932,949 + MPMX19_01854 0.79 +0.1 1,932,949 + MPMX19_01854 0.79 -0.4 1,932,949 + MPMX19_01854 0.79 -0.2 1,932,949 + MPMX19_01854 0.79 +0.1 1,932,949 + MPMX19_01854 0.79 +0.6 1,932,949 + MPMX19_01854 0.79 +0.4 1,932,949 + MPMX19_01854 0.79 -1.8 1,932,949 + MPMX19_01854 0.79 -0.0 1,932,949 + MPMX19_01854 0.79 +0.6 1,932,949 + MPMX19_01854 0.79 -1.3 1,932,949 + MPMX19_01854 0.79 -1.6 1,932,949 + MPMX19_01854 0.79 +0.4 1,932,949 + MPMX19_01854 0.79 -0.1 1,932,949 + MPMX19_01854 0.79 -1.3 1,932,949 + MPMX19_01854 0.79 -1.6 1,932,949 + MPMX19_01854 0.79 -0.6 1,932,949 + MPMX19_01854 0.79 +0.2 1,932,949 + MPMX19_01854 0.79 -0.3 1,932,949 + MPMX19_01854 0.79 -1.2 1,932,949 + MPMX19_01854 0.79 -1.6 1,932,949 + MPMX19_01854 0.79 -1.2 1,932,949 + MPMX19_01854 0.79 -0.0 1,932,949 + MPMX19_01854 0.79 -0.4 1,932,949 + MPMX19_01854 0.79 -0.8 1,932,949 + MPMX19_01854 0.79 +1.2 1,932,949 + MPMX19_01854 0.79 -1.2 1,932,950 - MPMX19_01854 0.79 +0.2 1,932,950 - MPMX19_01854 0.79 -0.4 1,932,950 - MPMX19_01854 0.79 -0.8 1,932,950 - MPMX19_01854 0.79 +0.5 1,932,950 - MPMX19_01854 0.79 +0.2 1,932,950 - MPMX19_01854 0.79 -2.0 1,932,950 - MPMX19_01854 0.79 +0.5 1,932,950 - MPMX19_01854 0.79 -0.6 1,932,950 - MPMX19_01854 0.79 -0.6 1,932,950 - MPMX19_01854 0.79 +1.0 1,932,950 - MPMX19_01854 0.79 -0.6 1,932,950 - MPMX19_01854 0.79 -0.4 1,932,950 - MPMX19_01854 0.79 +2.5 1,932,950 - MPMX19_01854 0.79 +1.0 1,932,950 - MPMX19_01854 0.79 -1.3 1,932,950 - MPMX19_01854 0.79 +0.2 1,932,950 - MPMX19_01854 0.79 +0.1 1,932,950 - MPMX19_01854 0.79 -1.5 1,932,950 - MPMX19_01854 0.79 +0.8 1,932,950 - MPMX19_01854 0.79 -0.8 1,932,950 - MPMX19_01854 0.79 +0.5 1,932,950 - MPMX19_01854 0.79 -0.4 1,932,950 - MPMX19_01854 0.79 -1.5 1,932,950 - MPMX19_01854 0.79 -0.8 1,932,950 - MPMX19_01854 0.79 -0.6 1,932,950 - MPMX19_01854 0.79 +0.6 1,932,950 - MPMX19_01854 0.79 -1.4 1,932,950 - MPMX19_01854 0.79 +0.4 1,932,950 - MPMX19_01854 0.79 +0.5 1,932,950 - MPMX19_01854 0.79 -1.0 1,932,950 - MPMX19_01854 0.79 -0.5 1,932,950 - MPMX19_01854 0.79 -1.2 1,932,950 - MPMX19_01854 0.79 +0.5 1,932,950 - MPMX19_01854 0.79 +0.2 1,932,950 - MPMX19_01854 0.79 +0.1 1,933,138 + -1.2 1,933,139 - -0.4 1,933,209 + -1.4 1,933,209 + -0.9 1,933,209 + +0.9 1,933,209 + +0.3 1,933,209 + -0.5 1,933,209 + -0.9 1,933,209 + -0.8 1,933,209 + -1.0 1,933,209 - +0.0 1,933,210 - -0.2 1,933,210 - -1.1 1,933,210 - -1.0 1,933,210 - -0.4 1,933,218 + +1.5 1,933,218 + +0.6 1,933,218 + -0.9 1,933,218 + -1.1 1,933,218 + -0.9 1,933,219 - -0.8 1,933,219 - +0.4 1,933,219 - +0.8 1,933,294 + +0.7 1,933,294 + -0.3 1,933,294 + -2.7 1,933,294 + -1.5 1,933,294 + -1.7 1,933,295 - -2.1 1,933,295 - -0.3 1,933,295 - +0.6 1,933,295 - -0.9 1,933,295 - +0.6 1,933,295 - +1.0 1,933,984 + -0.0 1,933,984 + -0.6 1,933,984 + +0.1 1,933,984 + +0.4 1,933,984 + -1.8 1,933,984 + -1.2 1,933,984 + +0.2 1,933,984 + -0.5 1,933,984 + +1.5 1,933,984 + +0.7 1,933,984 + -2.0 1,933,985 - -0.0 1,933,985 - -0.3 1,933,985 - -0.3 1,933,985 - -1.3 1,933,985 - +0.8 1,933,985 - -0.2 1,933,985 - +0.2 1,933,985 - -0.5 1,933,985 - -0.1 1,934,368 + -0.3 1,934,368 + +1.5 1,934,368 + -1.0 1,934,368 + +1.5 1,934,368 + -1.6 1,934,368 + -0.2 1,934,368 + +0.1 1,934,369 - -0.6 1,934,369 - -1.2 1,934,369 - -0.8 1,934,369 - -0.6 1,934,369 - -1.3 1,934,369 - -0.3 1,934,502 + -0.7 1,934,502 + -1.3 1,934,502 + +0.4 1,934,664 + MPMX19_01857 0.18 -0.8 1,934,664 + MPMX19_01857 0.18 -0.2 1,934,664 + MPMX19_01857 0.18 -0.3 1,934,664 + MPMX19_01857 0.18 -0.3 1,934,664 + MPMX19_01857 0.18 -1.6 1,934,664 + MPMX19_01857 0.18 -1.8 1,934,665 - MPMX19_01857 0.18 +0.6 1,934,665 - MPMX19_01857 0.18 +0.6 1,934,665 - MPMX19_01857 0.18 +0.2 1,934,665 - MPMX19_01857 0.18 -0.2 1,934,665 - MPMX19_01857 0.18 -1.5 1,934,760 + MPMX19_01857 0.26 +0.1 1,934,760 + MPMX19_01857 0.26 -0.0 1,934,760 + MPMX19_01857 0.26 +1.0 1,934,760 + MPMX19_01857 0.26 -0.8 1,934,760 + MPMX19_01857 0.26 -0.5 1,934,760 + MPMX19_01857 0.26 -0.7 1,934,760 + MPMX19_01857 0.26 +0.4 1,934,760 + MPMX19_01857 0.26 -0.3 1,934,760 + MPMX19_01857 0.26 +2.0 1,934,760 + MPMX19_01857 0.26 -0.0 1,934,760 + MPMX19_01857 0.26 -0.5 1,934,760 + MPMX19_01857 0.26 +0.2 1,934,760 + MPMX19_01857 0.26 +0.8 1,934,760 + MPMX19_01857 0.26 -1.2 1,934,760 + MPMX19_01857 0.26 +0.8 1,934,760 + MPMX19_01857 0.26 +0.2 1,934,760 + MPMX19_01857 0.26 -0.5 1,934,760 + MPMX19_01857 0.26 -1.0 1,934,760 + MPMX19_01857 0.26 -0.8 1,934,760 + MPMX19_01857 0.26 -1.5 1,934,760 + MPMX19_01857 0.26 -1.5 1,934,760 + MPMX19_01857 0.26 -1.2 1,934,760 + MPMX19_01857 0.26 -0.2 1,934,760 + MPMX19_01857 0.26 -0.2 1,934,760 + MPMX19_01857 0.26 -0.0 1,934,760 + MPMX19_01857 0.26 +0.3 1,934,760 + MPMX19_01857 0.26 -0.6 1,934,760 + MPMX19_01857 0.26 +0.4 1,934,761 - MPMX19_01857 0.26 -2.3 1,934,761 - MPMX19_01857 0.26 -1.0 1,934,761 - MPMX19_01857 0.26 -0.5 1,934,761 - MPMX19_01857 0.26 -0.6 1,934,761 - MPMX19_01857 0.26 +0.3 1,934,761 - MPMX19_01857 0.26 -0.2 1,934,761 - MPMX19_01857 0.26 +1.2 1,934,761 - MPMX19_01857 0.26 -0.4 1,934,761 - MPMX19_01857 0.26 -1.6 1,934,761 - MPMX19_01857 0.26 +0.7 1,934,761 - MPMX19_01857 0.26 -1.6
Or see this region's nucleotide sequence