Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01825 and MPMX19_01826 are separated by 142 nucleotides MPMX19_01826 and MPMX19_01827 are separated by 202 nucleotides
MPMX19_01825: MPMX19_01825 - hypothetical protein, at 1,907,459 to 1,908,592
_01825
MPMX19_01826: MPMX19_01826 - Polyphenol oxidase, at 1,908,735 to 1,909,502
_01826
MPMX19_01827: MPMX19_01827 - Ribose-phosphate pyrophosphokinase, at 1,909,705 to 1,910,640
_01827
Position (kb)
1908
1909
1910 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1908.631 kb on + strand at 1908.632 kb on - strand at 1908.690 kb on + strand at 1908.690 kb on + strand at 1908.690 kb on + strand at 1908.690 kb on + strand at 1908.690 kb on + strand at 1908.690 kb on + strand at 1908.690 kb on + strand at 1908.690 kb on + strand at 1908.690 kb on + strand at 1908.690 kb on + strand at 1908.691 kb on - strand at 1908.691 kb on - strand at 1908.691 kb on - strand at 1908.691 kb on - strand at 1908.691 kb on - strand at 1908.819 kb on + strand, within MPMX19_01826 at 1908.819 kb on + strand, within MPMX19_01826 at 1908.819 kb on + strand, within MPMX19_01826 at 1908.819 kb on + strand, within MPMX19_01826 at 1908.820 kb on - strand, within MPMX19_01826 at 1908.820 kb on - strand, within MPMX19_01826 at 1908.820 kb on - strand, within MPMX19_01826 at 1908.820 kb on - strand, within MPMX19_01826 at 1908.820 kb on - strand, within MPMX19_01826 at 1909.230 kb on + strand, within MPMX19_01826 at 1909.230 kb on + strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.290 kb on + strand, within MPMX19_01826 at 1909.290 kb on + strand, within MPMX19_01826 at 1909.290 kb on + strand, within MPMX19_01826 at 1909.290 kb on + strand, within MPMX19_01826 at 1909.290 kb on + strand, within MPMX19_01826 at 1909.290 kb on + strand, within MPMX19_01826 at 1909.291 kb on - strand, within MPMX19_01826 at 1909.291 kb on - strand, within MPMX19_01826 at 1909.291 kb on - strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.400 kb on + strand, within MPMX19_01826 at 1909.400 kb on + strand, within MPMX19_01826 at 1909.400 kb on + strand, within MPMX19_01826 at 1909.400 kb on + strand, within MPMX19_01826 at 1909.401 kb on - strand, within MPMX19_01826 at 1909.401 kb on - strand, within MPMX19_01826 at 1909.401 kb on - strand, within MPMX19_01826 at 1909.431 kb on + strand at 1909.431 kb on + strand at 1909.431 kb on + strand at 1909.432 kb on - strand at 1909.432 kb on - strand at 1909.432 kb on - strand at 1909.464 kb on + strand at 1909.464 kb on + strand at 1909.465 kb on - strand at 1909.465 kb on - strand at 1909.465 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,908,631 + +2.0 1,908,632 - -0.8 1,908,690 + +0.5 1,908,690 + +0.7 1,908,690 + -1.2 1,908,690 + -0.2 1,908,690 + +0.2 1,908,690 + -0.2 1,908,690 + -1.5 1,908,690 + -0.2 1,908,690 + -0.0 1,908,690 + +1.2 1,908,691 - -1.4 1,908,691 - -1.5 1,908,691 - -0.4 1,908,691 - -1.7 1,908,691 - -1.2 1,908,819 + MPMX19_01826 0.11 -0.0 1,908,819 + MPMX19_01826 0.11 -1.4 1,908,819 + MPMX19_01826 0.11 +0.7 1,908,819 + MPMX19_01826 0.11 +1.0 1,908,820 - MPMX19_01826 0.11 +0.8 1,908,820 - MPMX19_01826 0.11 -1.2 1,908,820 - MPMX19_01826 0.11 -0.9 1,908,820 - MPMX19_01826 0.11 -2.2 1,908,820 - MPMX19_01826 0.11 -0.9 1,909,230 + MPMX19_01826 0.64 -0.4 1,909,230 + MPMX19_01826 0.64 -1.8 1,909,231 - MPMX19_01826 0.65 -0.8 1,909,231 - MPMX19_01826 0.65 +0.7 1,909,231 - MPMX19_01826 0.65 +1.0 1,909,231 - MPMX19_01826 0.65 -1.5 1,909,231 - MPMX19_01826 0.65 +0.6 1,909,231 - MPMX19_01826 0.65 +0.4 1,909,231 - MPMX19_01826 0.65 +0.6 1,909,231 - MPMX19_01826 0.65 -1.4 1,909,290 + MPMX19_01826 0.72 +0.7 1,909,290 + MPMX19_01826 0.72 -0.6 1,909,290 + MPMX19_01826 0.72 -0.0 1,909,290 + MPMX19_01826 0.72 +0.6 1,909,290 + MPMX19_01826 0.72 -1.6 1,909,290 + MPMX19_01826 0.72 -0.4 1,909,291 - MPMX19_01826 0.72 -0.4 1,909,291 - MPMX19_01826 0.72 -0.6 1,909,291 - MPMX19_01826 0.72 +0.5 1,909,341 + MPMX19_01826 0.79 +0.2 1,909,341 + MPMX19_01826 0.79 +1.0 1,909,341 + MPMX19_01826 0.79 +0.1 1,909,341 + MPMX19_01826 0.79 -2.1 1,909,341 + MPMX19_01826 0.79 -1.6 1,909,341 + MPMX19_01826 0.79 -0.4 1,909,341 + MPMX19_01826 0.79 +1.4 1,909,341 + MPMX19_01826 0.79 +0.8 1,909,341 + MPMX19_01826 0.79 +0.4 1,909,341 + MPMX19_01826 0.79 +1.0 1,909,341 + MPMX19_01826 0.79 +1.4 1,909,341 + MPMX19_01826 0.79 +0.8 1,909,341 + MPMX19_01826 0.79 +0.4 1,909,341 + MPMX19_01826 0.79 +1.0 1,909,341 + MPMX19_01826 0.79 +0.6 1,909,342 - MPMX19_01826 0.79 +0.7 1,909,342 - MPMX19_01826 0.79 -0.4 1,909,342 - MPMX19_01826 0.79 -1.0 1,909,342 - MPMX19_01826 0.79 -0.5 1,909,342 - MPMX19_01826 0.79 +0.4 1,909,342 - MPMX19_01826 0.79 -0.6 1,909,342 - MPMX19_01826 0.79 -1.2 1,909,400 + MPMX19_01826 0.87 -0.5 1,909,400 + MPMX19_01826 0.87 -2.1 1,909,400 + MPMX19_01826 0.87 -0.6 1,909,400 + MPMX19_01826 0.87 +1.0 1,909,401 - MPMX19_01826 0.87 -1.7 1,909,401 - MPMX19_01826 0.87 -0.4 1,909,401 - MPMX19_01826 0.87 +1.5 1,909,431 + +1.2 1,909,431 + +1.0 1,909,431 + +1.5 1,909,432 - +0.7 1,909,432 - +1.5 1,909,432 - -0.0 1,909,464 + -1.0 1,909,464 + -0.4 1,909,465 - +0.4 1,909,465 - +0.4 1,909,465 - -1.7
Or see this region's nucleotide sequence