Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01792 and MPMX19_01793 are separated by 391 nucleotides MPMX19_01793 and MPMX19_01794 are separated by 116 nucleotides MPMX19_01794 and MPMX19_01795 are separated by 132 nucleotides
MPMX19_01792: MPMX19_01792 - Putative HTH-type transcriptional regulator YhjB, at 1,877,815 to 1,878,534
_01792
MPMX19_01793: MPMX19_01793 - Transcriptional regulatory protein DegU, at 1,878,926 to 1,879,594
_01793
MPMX19_01794: MPMX19_01794 - Putative cysteine protease YraA, at 1,879,711 to 1,880,283
_01794
MPMX19_01795: MPMX19_01795 - hypothetical protein, at 1,880,416 to 1,880,772
_01795
Position (kb)
1878
1879
1880 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1878.158 kb on + strand, within MPMX19_01792 at 1878.158 kb on + strand, within MPMX19_01792 at 1878.158 kb on + strand, within MPMX19_01792 at 1878.158 kb on + strand, within MPMX19_01792 at 1878.158 kb on + strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.323 kb on + strand, within MPMX19_01792 at 1878.323 kb on + strand, within MPMX19_01792 at 1878.323 kb on + strand, within MPMX19_01792 at 1878.323 kb on + strand, within MPMX19_01792 at 1878.324 kb on - strand, within MPMX19_01792 at 1878.324 kb on - strand, within MPMX19_01792 at 1878.324 kb on - strand, within MPMX19_01792 at 1878.324 kb on - strand, within MPMX19_01792 at 1878.324 kb on - strand, within MPMX19_01792 at 1878.498 kb on + strand at 1878.499 kb on - strand at 1878.545 kb on + strand at 1878.545 kb on + strand at 1878.545 kb on + strand at 1878.545 kb on + strand at 1878.546 kb on - strand at 1878.546 kb on - strand at 1878.637 kb on - strand at 1878.637 kb on - strand at 1878.637 kb on - strand at 1878.642 kb on + strand at 1878.642 kb on + strand at 1878.642 kb on + strand at 1878.643 kb on - strand at 1878.647 kb on - strand at 1878.691 kb on + strand at 1878.691 kb on + strand at 1878.691 kb on + strand at 1878.692 kb on - strand at 1878.692 kb on - strand at 1878.742 kb on + strand at 1878.742 kb on + strand at 1878.743 kb on - strand at 1878.743 kb on - strand at 1878.744 kb on + strand at 1878.745 kb on - strand at 1878.745 kb on - strand at 1878.745 kb on - strand at 1878.745 kb on - strand at 1878.745 kb on - strand at 1878.745 kb on - strand at 1878.745 kb on - strand at 1878.766 kb on + strand at 1878.766 kb on + strand at 1878.767 kb on - strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.789 kb on - strand at 1878.789 kb on - strand at 1878.797 kb on - strand at 1878.805 kb on - strand at 1879.229 kb on + strand, within MPMX19_01793 at 1879.229 kb on + strand, within MPMX19_01793 at 1879.229 kb on + strand, within MPMX19_01793 at 1879.229 kb on + strand, within MPMX19_01793 at 1879.229 kb on + strand, within MPMX19_01793 at 1879.229 kb on + strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.302 kb on - strand, within MPMX19_01793 at 1879.302 kb on - strand, within MPMX19_01793 at 1879.302 kb on - strand, within MPMX19_01793 at 1879.302 kb on - strand, within MPMX19_01793 at 1879.302 kb on - strand, within MPMX19_01793 at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.593 kb on - strand at 1879.593 kb on - strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.651 kb on + strand at 1879.651 kb on + strand at 1879.652 kb on - strand at 1879.652 kb on - strand at 1879.652 kb on - strand at 1879.687 kb on + strand at 1879.688 kb on - strand at 1879.712 kb on + strand at 1879.712 kb on + strand at 1879.712 kb on + strand at 1879.712 kb on + strand at 1879.713 kb on - strand at 1879.713 kb on - strand at 1880.066 kb on + strand, within MPMX19_01794 at 1880.066 kb on + strand, within MPMX19_01794 at 1880.066 kb on + strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.327 kb on + strand at 1880.328 kb on - strand at 1880.328 kb on - strand at 1880.328 kb on - strand at 1880.382 kb on + strand at 1880.383 kb on - strand at 1880.383 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,878,158 + MPMX19_01792 0.48 -1.9 1,878,158 + MPMX19_01792 0.48 +0.6 1,878,158 + MPMX19_01792 0.48 -0.6 1,878,158 + MPMX19_01792 0.48 -1.2 1,878,158 + MPMX19_01792 0.48 -1.2 1,878,159 - MPMX19_01792 0.48 -1.4 1,878,159 - MPMX19_01792 0.48 -1.8 1,878,159 - MPMX19_01792 0.48 +0.5 1,878,159 - MPMX19_01792 0.48 -1.4 1,878,159 - MPMX19_01792 0.48 +0.3 1,878,159 - MPMX19_01792 0.48 -1.7 1,878,159 - MPMX19_01792 0.48 +0.2 1,878,159 - MPMX19_01792 0.48 -0.4 1,878,159 - MPMX19_01792 0.48 -1.1 1,878,159 - MPMX19_01792 0.48 +0.0 1,878,323 + MPMX19_01792 0.71 +2.0 1,878,323 + MPMX19_01792 0.71 -0.6 1,878,323 + MPMX19_01792 0.71 +0.4 1,878,323 + MPMX19_01792 0.71 +1.7 1,878,324 - MPMX19_01792 0.71 -1.6 1,878,324 - MPMX19_01792 0.71 -0.0 1,878,324 - MPMX19_01792 0.71 +0.6 1,878,324 - MPMX19_01792 0.71 +1.0 1,878,324 - MPMX19_01792 0.71 -0.7 1,878,498 + +0.2 1,878,499 - -0.4 1,878,545 + +0.2 1,878,545 + -0.7 1,878,545 + -1.7 1,878,545 + +0.3 1,878,546 - -1.4 1,878,546 - +0.4 1,878,637 - -0.0 1,878,637 - -0.6 1,878,637 - +1.6 1,878,642 + +0.4 1,878,642 + -2.4 1,878,642 + -1.1 1,878,643 - +0.0 1,878,647 - +0.7 1,878,691 + +0.4 1,878,691 + -1.1 1,878,691 + +0.4 1,878,692 - -0.0 1,878,692 - -0.5 1,878,742 + +0.6 1,878,742 + -0.5 1,878,743 - -1.0 1,878,743 - -1.5 1,878,744 + -0.2 1,878,745 - -1.5 1,878,745 - -0.6 1,878,745 - -1.7 1,878,745 - +1.1 1,878,745 - +0.7 1,878,745 - -0.9 1,878,745 - +1.1 1,878,766 + -0.5 1,878,766 + +0.3 1,878,767 - -0.0 1,878,788 + -0.8 1,878,788 + -0.4 1,878,788 + +0.2 1,878,788 + -0.8 1,878,788 + -0.0 1,878,788 + +0.5 1,878,788 + +0.0 1,878,788 + -0.5 1,878,789 - -0.6 1,878,789 - +0.4 1,878,797 - -1.0 1,878,805 - -0.6 1,879,229 + MPMX19_01793 0.45 -1.9 1,879,229 + MPMX19_01793 0.45 +1.0 1,879,229 + MPMX19_01793 0.45 -0.5 1,879,229 + MPMX19_01793 0.45 +0.4 1,879,229 + MPMX19_01793 0.45 -1.4 1,879,229 + MPMX19_01793 0.45 -1.6 1,879,230 - MPMX19_01793 0.45 +1.2 1,879,230 - MPMX19_01793 0.45 +0.2 1,879,230 - MPMX19_01793 0.45 +0.1 1,879,230 - MPMX19_01793 0.45 +1.2 1,879,230 - MPMX19_01793 0.45 -1.5 1,879,230 - MPMX19_01793 0.45 +0.3 1,879,230 - MPMX19_01793 0.45 -1.0 1,879,230 - MPMX19_01793 0.45 -0.6 1,879,230 - MPMX19_01793 0.45 -0.8 1,879,230 - MPMX19_01793 0.45 -1.2 1,879,301 + MPMX19_01793 0.56 -0.4 1,879,301 + MPMX19_01793 0.56 -0.1 1,879,301 + MPMX19_01793 0.56 +0.3 1,879,301 + MPMX19_01793 0.56 -2.3 1,879,301 + MPMX19_01793 0.56 -1.4 1,879,301 + MPMX19_01793 0.56 +0.3 1,879,301 + MPMX19_01793 0.56 -0.9 1,879,302 - MPMX19_01793 0.56 -1.4 1,879,302 - MPMX19_01793 0.56 -1.7 1,879,302 - MPMX19_01793 0.56 -0.8 1,879,302 - MPMX19_01793 0.56 -2.4 1,879,302 - MPMX19_01793 0.56 -0.6 1,879,592 + +1.3 1,879,592 + -0.3 1,879,592 + +0.6 1,879,592 + +0.7 1,879,592 + +0.2 1,879,592 + -0.0 1,879,592 + -0.6 1,879,592 + +0.4 1,879,592 + +0.4 1,879,592 + +0.6 1,879,593 - +0.5 1,879,593 - -0.4 1,879,644 + -0.5 1,879,644 + -0.3 1,879,644 + +0.0 1,879,644 + -0.0 1,879,644 + +0.6 1,879,644 + +0.1 1,879,644 + -2.5 1,879,644 + +0.7 1,879,644 + +1.4 1,879,644 + -0.5 1,879,645 - +0.4 1,879,645 - -0.2 1,879,645 - -0.2 1,879,645 - -0.6 1,879,645 - -0.0 1,879,645 - -0.9 1,879,645 - -0.2 1,879,645 - +1.6 1,879,649 + -0.3 1,879,649 + +1.0 1,879,649 + +1.0 1,879,649 + -0.4 1,879,649 + +0.3 1,879,649 + -2.4 1,879,649 + -0.4 1,879,649 + -1.0 1,879,649 + -0.8 1,879,649 + -1.8 1,879,649 + +0.5 1,879,649 + +1.0 1,879,649 + +1.1 1,879,649 + +0.6 1,879,649 + -0.5 1,879,649 + +0.2 1,879,649 + +0.2 1,879,649 + -0.1 1,879,649 + -0.0 1,879,649 + +0.7 1,879,649 + +0.1 1,879,649 + -0.6 1,879,649 + +0.6 1,879,649 + +0.7 1,879,649 + -0.7 1,879,649 + -0.0 1,879,649 + -0.4 1,879,650 - +0.4 1,879,650 - -0.2 1,879,650 - -2.0 1,879,650 - -2.1 1,879,650 - -0.5 1,879,650 - +0.2 1,879,650 - -1.5 1,879,650 - -0.0 1,879,650 - -0.8 1,879,650 - -1.2 1,879,650 - -0.2 1,879,650 - +0.3 1,879,650 - +0.4 1,879,650 - -1.7 1,879,650 - -0.2 1,879,650 - -1.2 1,879,650 - -1.3 1,879,650 - -2.0 1,879,650 - -0.2 1,879,650 - +0.6 1,879,650 - -0.2 1,879,650 - -1.7 1,879,650 - +0.5 1,879,650 - +0.5 1,879,650 - -0.4 1,879,650 - +1.0 1,879,650 - -0.9 1,879,650 - -0.3 1,879,650 - -1.2 1,879,650 - -0.4 1,879,650 - -1.4 1,879,650 - -0.7 1,879,650 - +1.5 1,879,651 + -0.3 1,879,651 + -1.2 1,879,652 - -0.0 1,879,652 - -0.7 1,879,652 - -1.0 1,879,687 + +0.7 1,879,688 - -0.3 1,879,712 + -1.7 1,879,712 + -0.2 1,879,712 + -0.8 1,879,712 + -0.8 1,879,713 - -1.0 1,879,713 - +0.1 1,880,066 + MPMX19_01794 0.62 -1.2 1,880,066 + MPMX19_01794 0.62 +0.4 1,880,066 + MPMX19_01794 0.62 +0.2 1,880,067 - MPMX19_01794 0.62 +1.0 1,880,067 - MPMX19_01794 0.62 -1.2 1,880,067 - MPMX19_01794 0.62 -0.8 1,880,067 - MPMX19_01794 0.62 +0.4 1,880,067 - MPMX19_01794 0.62 -1.5 1,880,067 - MPMX19_01794 0.62 -0.4 1,880,067 - MPMX19_01794 0.62 +0.5 1,880,067 - MPMX19_01794 0.62 -1.1 1,880,067 - MPMX19_01794 0.62 +0.2 1,880,067 - MPMX19_01794 0.62 -0.8 1,880,327 + -0.8 1,880,328 - +0.6 1,880,328 - -0.2 1,880,328 - -1.4 1,880,382 + +0.1 1,880,383 - -1.5 1,880,383 - -1.6
Or see this region's nucleotide sequence