Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01774 and MPMX19_01775 are separated by 184 nucleotides MPMX19_01775 and MPMX19_01776 are separated by 36 nucleotides MPMX19_01776 and MPMX19_01777 are separated by 329 nucleotides
MPMX19_01774: MPMX19_01774 - Ketol-acid reductoisomerase (NADP(+)), at 1,861,131 to 1,862,150
_01774
MPMX19_01775: MPMX19_01775 - Acetolactate synthase isozyme 3 small subunit, at 1,862,335 to 1,862,841
_01775
MPMX19_01776: MPMX19_01776 - Acetolactate synthase isozyme 3 large subunit, at 1,862,878 to 1,864,641
_01776
MPMX19_01777: MPMX19_01777 - 2-aminoadipate transaminase, at 1,864,971 to 1,866,182
_01777
Position (kb)
1862
1863
1864
1865 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1862.336 kb on + strand at 1862.337 kb on - strand at 1862.337 kb on - strand at 1862.337 kb on - strand at 1864.722 kb on - strand at 1864.722 kb on - strand at 1864.722 kb on - strand at 1864.776 kb on - strand at 1864.776 kb on - strand at 1864.776 kb on - strand at 1864.776 kb on - strand at 1865.227 kb on + strand, within MPMX19_01777 at 1865.228 kb on - strand, within MPMX19_01777 at 1865.228 kb on - strand, within MPMX19_01777 at 1865.270 kb on - strand, within MPMX19_01777 at 1865.270 kb on - strand, within MPMX19_01777 at 1865.270 kb on - strand, within MPMX19_01777 at 1865.270 kb on - strand, within MPMX19_01777 at 1865.540 kb on - strand, within MPMX19_01777 at 1865.554 kb on + strand, within MPMX19_01777 at 1865.555 kb on - strand, within MPMX19_01777
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,862,336 + -0.4 1,862,337 - -0.8 1,862,337 - -0.8 1,862,337 - -0.6 1,864,722 - -0.8 1,864,722 - -2.0 1,864,722 - -0.7 1,864,776 - -0.2 1,864,776 - -0.7 1,864,776 - -0.4 1,864,776 - -0.4 1,865,227 + MPMX19_01777 0.21 +2.0 1,865,228 - MPMX19_01777 0.21 +2.0 1,865,228 - MPMX19_01777 0.21 -0.0 1,865,270 - MPMX19_01777 0.25 +1.0 1,865,270 - MPMX19_01777 0.25 -0.4 1,865,270 - MPMX19_01777 0.25 -0.6 1,865,270 - MPMX19_01777 0.25 -0.0 1,865,540 - MPMX19_01777 0.47 +0.4 1,865,554 + MPMX19_01777 0.48 +1.5 1,865,555 - MPMX19_01777 0.48 +1.4
Or see this region's nucleotide sequence