Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01655 and MPMX19_01656 are separated by 189 nucleotides MPMX19_01656 and MPMX19_01657 are separated by 62 nucleotides MPMX19_01657 and MPMX19_01658 are separated by 110 nucleotides
MPMX19_01655: MPMX19_01655 - Cysteine desulfurase NifS, at 1,737,537 to 1,738,688
_01655
MPMX19_01656: MPMX19_01656 - Co-chaperone protein HscB, at 1,738,878 to 1,739,573
_01656
MPMX19_01657: MPMX19_01657 - Ferredoxin-6, at 1,739,636 to 1,739,965
_01657
MPMX19_01658: MPMX19_01658 - tRNA-specific 2-thiouridylase MnmA, at 1,740,076 to 1,741,263
_01658
Position (kb)
1738
1739
1740 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1738.779 kb on + strand at 1738.779 kb on + strand at 1738.779 kb on + strand at 1738.779 kb on + strand at 1738.839 kb on + strand at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.089 kb on + strand, within MPMX19_01656 at 1739.217 kb on + strand, within MPMX19_01656 at 1739.217 kb on + strand, within MPMX19_01656 at 1739.217 kb on + strand, within MPMX19_01656 at 1739.217 kb on + strand, within MPMX19_01656 at 1739.217 kb on + strand, within MPMX19_01656 at 1739.217 kb on + strand, within MPMX19_01656 at 1739.217 kb on + strand, within MPMX19_01656 at 1739.217 kb on + strand, within MPMX19_01656 at 1739.217 kb on + strand, within MPMX19_01656 at 1739.217 kb on + strand, within MPMX19_01656 at 1739.412 kb on + strand, within MPMX19_01656 at 1739.412 kb on + strand, within MPMX19_01656 at 1739.412 kb on + strand, within MPMX19_01656 at 1739.412 kb on + strand, within MPMX19_01656 at 1739.412 kb on + strand, within MPMX19_01656 at 1739.412 kb on + strand, within MPMX19_01656 at 1739.412 kb on + strand, within MPMX19_01656 at 1739.412 kb on + strand, within MPMX19_01656 at 1739.412 kb on + strand, within MPMX19_01656 at 1739.412 kb on + strand, within MPMX19_01656 at 1739.587 kb on + strand at 1739.618 kb on + strand at 1739.618 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.063 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.065 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand at 1740.067 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,738,779 + -1.1 1,738,779 + -0.4 1,738,779 + +1.1 1,738,779 + +0.6 1,738,839 + +1.0 1,739,089 + MPMX19_01656 0.30 -1.1 1,739,089 + MPMX19_01656 0.30 -0.6 1,739,089 + MPMX19_01656 0.30 -0.5 1,739,089 + MPMX19_01656 0.30 -1.1 1,739,089 + MPMX19_01656 0.30 +0.4 1,739,089 + MPMX19_01656 0.30 -0.6 1,739,089 + MPMX19_01656 0.30 -0.5 1,739,089 + MPMX19_01656 0.30 +1.0 1,739,089 + MPMX19_01656 0.30 -0.0 1,739,089 + MPMX19_01656 0.30 +0.3 1,739,089 + MPMX19_01656 0.30 -0.4 1,739,089 + MPMX19_01656 0.30 +0.1 1,739,089 + MPMX19_01656 0.30 -0.8 1,739,089 + MPMX19_01656 0.30 -0.0 1,739,089 + MPMX19_01656 0.30 -0.6 1,739,089 + MPMX19_01656 0.30 -0.4 1,739,217 + MPMX19_01656 0.49 -0.8 1,739,217 + MPMX19_01656 0.49 +0.1 1,739,217 + MPMX19_01656 0.49 -0.2 1,739,217 + MPMX19_01656 0.49 +0.7 1,739,217 + MPMX19_01656 0.49 -0.3 1,739,217 + MPMX19_01656 0.49 +1.0 1,739,217 + MPMX19_01656 0.49 +0.4 1,739,217 + MPMX19_01656 0.49 -0.5 1,739,217 + MPMX19_01656 0.49 +0.1 1,739,217 + MPMX19_01656 0.49 +0.4 1,739,412 + MPMX19_01656 0.77 -0.2 1,739,412 + MPMX19_01656 0.77 +0.1 1,739,412 + MPMX19_01656 0.77 -0.0 1,739,412 + MPMX19_01656 0.77 -0.4 1,739,412 + MPMX19_01656 0.77 +0.1 1,739,412 + MPMX19_01656 0.77 -1.6 1,739,412 + MPMX19_01656 0.77 +0.1 1,739,412 + MPMX19_01656 0.77 +1.0 1,739,412 + MPMX19_01656 0.77 +0.8 1,739,412 + MPMX19_01656 0.77 +1.1 1,739,587 + -1.7 1,739,618 + -0.2 1,739,618 + +0.1 1,740,063 + -0.6 1,740,063 + +0.8 1,740,063 + -1.2 1,740,063 + -2.2 1,740,063 + -0.4 1,740,063 + -1.7 1,740,063 + -0.6 1,740,063 + -0.9 1,740,063 + +0.5 1,740,063 + -0.7 1,740,063 + -3.0 1,740,063 + -0.6 1,740,063 + -1.2 1,740,063 + -0.3 1,740,063 + +0.1 1,740,063 + -0.8 1,740,063 + -1.8 1,740,063 + +0.7 1,740,063 + -0.6 1,740,063 + +0.6 1,740,063 + +1.4 1,740,063 + -1.4 1,740,063 + +0.8 1,740,063 + -0.6 1,740,063 + +0.6 1,740,063 + -0.2 1,740,063 + +0.1 1,740,063 + -0.9 1,740,063 + -1.7 1,740,063 + -0.0 1,740,063 + +0.4 1,740,063 + -0.0 1,740,063 + -0.8 1,740,065 + -0.8 1,740,065 + -0.4 1,740,065 + -0.0 1,740,065 + -0.7 1,740,065 + -0.4 1,740,065 + +0.7 1,740,065 + -0.5 1,740,065 + +1.0 1,740,065 + +0.6 1,740,065 + +1.4 1,740,065 + -0.2 1,740,065 + +1.4 1,740,065 + -0.4 1,740,065 + -0.8 1,740,065 + -1.2 1,740,065 + -1.4 1,740,065 + -1.7 1,740,065 + -0.4 1,740,065 + +0.2 1,740,065 + +0.4 1,740,065 + -0.0 1,740,065 + -0.6 1,740,065 + -0.4 1,740,065 + +0.1 1,740,065 + -1.5 1,740,065 + +0.5 1,740,065 + -0.6 1,740,065 + -1.1 1,740,065 + -0.5 1,740,065 + +0.1 1,740,065 + -0.1 1,740,065 + -1.2 1,740,065 + -0.5 1,740,065 + +1.0 1,740,065 + -0.2 1,740,065 + +1.6 1,740,065 + -0.4 1,740,065 + -0.4 1,740,065 + -1.4 1,740,065 + -0.6 1,740,065 + +1.2 1,740,065 + -0.4 1,740,065 + -0.7 1,740,065 + -1.8 1,740,065 + -1.4 1,740,067 + -0.8 1,740,067 + -1.5 1,740,067 + -1.6 1,740,067 + +0.1 1,740,067 + +1.8 1,740,067 + -0.0 1,740,067 + +0.2 1,740,067 + -0.0 1,740,067 + +0.4 1,740,067 + -0.5 1,740,067 + +0.1 1,740,067 + -0.7 1,740,067 + -0.8 1,740,067 + -1.4 1,740,067 + +1.2
Or see this region's nucleotide sequence