Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01548 and MPMX19_01549 are separated by 112 nucleotides MPMX19_01549 and MPMX19_01550 are separated by 91 nucleotides MPMX19_01550 and MPMX19_01551 are separated by 137 nucleotides
MPMX19_01548: MPMX19_01548 - ATP-dependent Clp protease proteolytic subunit, at 1,623,271 to 1,623,897
_01548
MPMX19_01549: MPMX19_01549 - Trigger factor, at 1,624,010 to 1,625,353
_01549
MPMX19_01550: MPMX19_01550 - tRNA-Leu, at 1,625,445 to 1,625,529
_01550
MPMX19_01551: MPMX19_01551 - hypothetical protein, at 1,625,667 to 1,627,220
_01551
Position (kb)
1624
1625
1626 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1623.060 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.959 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.961 kb on - strand at 1623.984 kb on - strand at 1624.012 kb on - strand at 1625.040 kb on + strand, within MPMX19_01549 at 1625.368 kb on - strand at 1625.473 kb on - strand, within MPMX19_01550 at 1625.495 kb on - strand, within MPMX19_01550 at 1625.495 kb on - strand, within MPMX19_01550 at 1625.510 kb on - strand, within MPMX19_01550 at 1625.596 kb on - strand at 1625.596 kb on - strand at 1625.596 kb on - strand at 1625.596 kb on - strand at 1625.596 kb on - strand at 1625.596 kb on - strand at 1625.596 kb on - strand at 1625.596 kb on - strand at 1625.596 kb on - strand at 1625.596 kb on - strand at 1625.596 kb on - strand at 1625.596 kb on - strand at 1625.596 kb on - strand at 1625.598 kb on - strand at 1625.598 kb on - strand at 1625.598 kb on - strand at 1625.598 kb on - strand at 1625.598 kb on - strand at 1625.718 kb on + strand at 1625.719 kb on - strand at 1625.719 kb on - strand at 1625.755 kb on + strand at 1625.755 kb on + strand at 1625.755 kb on + strand at 1625.755 kb on + strand at 1625.755 kb on + strand at 1625.755 kb on + strand at 1625.755 kb on + strand at 1625.755 kb on + strand at 1625.755 kb on + strand at 1625.755 kb on + strand at 1625.755 kb on + strand at 1625.755 kb on + strand at 1625.755 kb on + strand at 1625.756 kb on - strand at 1625.756 kb on - strand at 1625.756 kb on - strand at 1625.756 kb on - strand at 1625.756 kb on - strand at 1625.756 kb on - strand at 1625.756 kb on - strand at 1625.756 kb on - strand at 1625.756 kb on - strand at 1625.756 kb on - strand at 1625.756 kb on - strand at 1625.756 kb on - strand at 1625.756 kb on - strand at 1625.797 kb on + strand at 1625.797 kb on + strand at 1625.797 kb on + strand at 1625.797 kb on + strand at 1625.798 kb on - strand at 1625.798 kb on - strand at 1625.798 kb on - strand at 1625.798 kb on - strand at 1625.959 kb on + strand, within MPMX19_01551 at 1625.959 kb on + strand, within MPMX19_01551 at 1625.959 kb on + strand, within MPMX19_01551 at 1625.959 kb on + strand, within MPMX19_01551 at 1625.959 kb on + strand, within MPMX19_01551 at 1625.959 kb on + strand, within MPMX19_01551 at 1625.959 kb on + strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1625.960 kb on - strand, within MPMX19_01551 at 1626.235 kb on + strand, within MPMX19_01551 at 1626.235 kb on + strand, within MPMX19_01551 at 1626.235 kb on + strand, within MPMX19_01551 at 1626.235 kb on + strand, within MPMX19_01551 at 1626.235 kb on + strand, within MPMX19_01551 at 1626.235 kb on + strand, within MPMX19_01551 at 1626.236 kb on - strand, within MPMX19_01551 at 1626.343 kb on + strand, within MPMX19_01551 at 1626.343 kb on + strand, within MPMX19_01551 at 1626.343 kb on + strand, within MPMX19_01551 at 1626.343 kb on + strand, within MPMX19_01551 at 1626.343 kb on + strand, within MPMX19_01551 at 1626.344 kb on - strand, within MPMX19_01551 at 1626.344 kb on - strand, within MPMX19_01551 at 1626.344 kb on - strand, within MPMX19_01551 at 1626.344 kb on - strand, within MPMX19_01551
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,623,060 - +0.1 1,623,959 - -1.2 1,623,959 - +1.5 1,623,959 - +0.2 1,623,959 - -0.6 1,623,959 - +0.6 1,623,959 - -0.5 1,623,959 - -1.0 1,623,959 - +1.2 1,623,959 - -0.1 1,623,959 - -0.9 1,623,959 - +0.8 1,623,959 - +0.2 1,623,959 - -0.2 1,623,959 - -1.4 1,623,959 - +0.8 1,623,961 - -2.0 1,623,961 - -0.6 1,623,961 - -0.7 1,623,961 - -1.0 1,623,961 - +0.7 1,623,961 - +1.0 1,623,961 - -0.6 1,623,961 - +0.2 1,623,961 - +0.4 1,623,984 - -2.3 1,624,012 - +0.1 1,625,040 + MPMX19_01549 0.77 +0.5 1,625,368 - -0.6 1,625,473 - MPMX19_01550 0.33 -1.6 1,625,495 - MPMX19_01550 0.59 +0.4 1,625,495 - MPMX19_01550 0.59 -1.4 1,625,510 - MPMX19_01550 0.76 -2.4 1,625,596 - -0.4 1,625,596 - +0.4 1,625,596 - -1.2 1,625,596 - -1.9 1,625,596 - +0.0 1,625,596 - -1.5 1,625,596 - +0.4 1,625,596 - -1.4 1,625,596 - +0.2 1,625,596 - -0.5 1,625,596 - -1.5 1,625,596 - +0.1 1,625,596 - -1.5 1,625,598 - -1.5 1,625,598 - -0.0 1,625,598 - -0.6 1,625,598 - -0.8 1,625,598 - -0.5 1,625,718 + -0.5 1,625,719 - -0.0 1,625,719 - -0.0 1,625,755 + -0.3 1,625,755 + +1.0 1,625,755 + -1.2 1,625,755 + +0.2 1,625,755 + +0.2 1,625,755 + +0.2 1,625,755 + -0.3 1,625,755 + -1.4 1,625,755 + -1.5 1,625,755 + -0.0 1,625,755 + +1.4 1,625,755 + -0.7 1,625,755 + +0.5 1,625,756 - -0.7 1,625,756 - +0.7 1,625,756 - +1.6 1,625,756 - -0.8 1,625,756 - +0.6 1,625,756 - -1.0 1,625,756 - -1.1 1,625,756 - -0.6 1,625,756 - +0.5 1,625,756 - +0.6 1,625,756 - -2.1 1,625,756 - -0.9 1,625,756 - +0.4 1,625,797 + -0.4 1,625,797 + -0.4 1,625,797 + -0.2 1,625,797 + -0.8 1,625,798 - -1.1 1,625,798 - -1.0 1,625,798 - -0.8 1,625,798 - -0.7 1,625,959 + MPMX19_01551 0.19 -0.6 1,625,959 + MPMX19_01551 0.19 -0.4 1,625,959 + MPMX19_01551 0.19 -0.8 1,625,959 + MPMX19_01551 0.19 +1.5 1,625,959 + MPMX19_01551 0.19 -0.3 1,625,959 + MPMX19_01551 0.19 +0.6 1,625,959 + MPMX19_01551 0.19 +0.5 1,625,960 - MPMX19_01551 0.19 -0.0 1,625,960 - MPMX19_01551 0.19 -1.9 1,625,960 - MPMX19_01551 0.19 +0.6 1,625,960 - MPMX19_01551 0.19 -0.8 1,625,960 - MPMX19_01551 0.19 +0.2 1,625,960 - MPMX19_01551 0.19 -0.8 1,625,960 - MPMX19_01551 0.19 -0.6 1,625,960 - MPMX19_01551 0.19 -0.4 1,625,960 - MPMX19_01551 0.19 +1.0 1,625,960 - MPMX19_01551 0.19 -1.0 1,625,960 - MPMX19_01551 0.19 -1.2 1,625,960 - MPMX19_01551 0.19 -0.3 1,625,960 - MPMX19_01551 0.19 -0.0 1,625,960 - MPMX19_01551 0.19 -1.4 1,626,235 + MPMX19_01551 0.37 +1.8 1,626,235 + MPMX19_01551 0.37 -0.6 1,626,235 + MPMX19_01551 0.37 -0.0 1,626,235 + MPMX19_01551 0.37 +0.9 1,626,235 + MPMX19_01551 0.37 +0.6 1,626,235 + MPMX19_01551 0.37 -0.8 1,626,236 - MPMX19_01551 0.37 -1.6 1,626,343 + MPMX19_01551 0.44 -1.9 1,626,343 + MPMX19_01551 0.44 -1.5 1,626,343 + MPMX19_01551 0.44 -1.4 1,626,343 + MPMX19_01551 0.44 -1.2 1,626,343 + MPMX19_01551 0.44 -0.9 1,626,344 - MPMX19_01551 0.44 -0.9 1,626,344 - MPMX19_01551 0.44 -0.6 1,626,344 - MPMX19_01551 0.44 -1.4 1,626,344 - MPMX19_01551 0.44 -0.0
Or see this region's nucleotide sequence