Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00908 and MPMX19_00909 are separated by 203 nucleotides MPMX19_00909 and MPMX19_00910 are separated by 47 nucleotides MPMX19_00910 and MPMX19_00911 are separated by 160 nucleotides MPMX19_00911 and MPMX19_00912 are separated by 216 nucleotides
MPMX19_00908: MPMX19_00908 - DNA mismatch repair protein MutS, at 942,363 to 945,044
_00908
MPMX19_00909: MPMX19_00909 - hypothetical protein, at 945,248 to 945,778
_00909
MPMX19_00910: MPMX19_00910 - hypothetical protein, at 945,826 to 946,191
_00910
MPMX19_00911: MPMX19_00911 - hypothetical protein, at 946,352 to 946,714
_00911
MPMX19_00912: MPMX19_00912 - Bifunctional uridylyltransferase/uridylyl-removing enzyme, at 946,931 to 949,774
_00912
Position (kb) 945
946
947 Strain fitness (log2 ratio) -2
-1
0
1
2 at 944.926 kb on + strand at 944.926 kb on + strand at 944.926 kb on + strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.927 kb on - strand at 944.944 kb on + strand at 944.945 kb on - strand at 944.945 kb on - strand at 944.986 kb on + strand at 944.986 kb on + strand at 944.986 kb on + strand at 944.986 kb on + strand at 944.987 kb on - strand at 944.987 kb on - strand at 944.987 kb on - strand at 944.987 kb on - strand at 944.987 kb on - strand at 944.987 kb on - strand at 945.091 kb on + strand at 945.091 kb on + strand at 945.091 kb on + strand at 945.091 kb on + strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.092 kb on - strand at 945.101 kb on + strand at 945.102 kb on - strand at 945.102 kb on - strand at 945.210 kb on + strand at 945.210 kb on + strand at 945.210 kb on + strand at 945.210 kb on + strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.211 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.216 kb on - strand at 945.232 kb on + strand at 945.446 kb on + strand, within MPMX19_00909 at 945.446 kb on + strand, within MPMX19_00909 at 945.446 kb on + strand, within MPMX19_00909 at 945.494 kb on + strand, within MPMX19_00909 at 945.494 kb on + strand, within MPMX19_00909 at 945.494 kb on + strand, within MPMX19_00909 at 945.494 kb on + strand, within MPMX19_00909 at 945.494 kb on + strand, within MPMX19_00909 at 945.494 kb on + strand, within MPMX19_00909 at 945.495 kb on - strand, within MPMX19_00909 at 945.495 kb on - strand, within MPMX19_00909 at 945.495 kb on - strand, within MPMX19_00909 at 945.495 kb on - strand, within MPMX19_00909 at 945.495 kb on - strand, within MPMX19_00909 at 945.598 kb on + strand, within MPMX19_00909 at 945.598 kb on + strand, within MPMX19_00909 at 945.599 kb on - strand, within MPMX19_00909 at 945.599 kb on - strand, within MPMX19_00909 at 945.605 kb on + strand, within MPMX19_00909 at 945.605 kb on + strand, within MPMX19_00909 at 945.605 kb on + strand, within MPMX19_00909 at 945.605 kb on + strand, within MPMX19_00909 at 945.605 kb on + strand, within MPMX19_00909 at 945.606 kb on - strand, within MPMX19_00909 at 945.606 kb on - strand, within MPMX19_00909 at 945.606 kb on - strand, within MPMX19_00909 at 945.606 kb on - strand, within MPMX19_00909 at 945.606 kb on - strand, within MPMX19_00909 at 945.798 kb on + strand at 945.798 kb on + strand at 945.799 kb on - strand at 945.799 kb on - strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.810 kb on + strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.811 kb on - strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.812 kb on + strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 945.813 kb on - strand at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.109 kb on + strand, within MPMX19_00910 at 946.110 kb on - strand, within MPMX19_00910 at 946.110 kb on - strand, within MPMX19_00910 at 946.110 kb on - strand, within MPMX19_00910 at 946.110 kb on - strand, within MPMX19_00910 at 946.124 kb on + strand, within MPMX19_00910 at 946.125 kb on - strand, within MPMX19_00910 at 946.133 kb on + strand, within MPMX19_00910 at 946.133 kb on + strand, within MPMX19_00910 at 946.134 kb on - strand, within MPMX19_00910 at 946.134 kb on - strand, within MPMX19_00910 at 946.134 kb on - strand, within MPMX19_00910 at 946.134 kb on - strand, within MPMX19_00910 at 946.413 kb on + strand, within MPMX19_00911 at 946.414 kb on - strand, within MPMX19_00911 at 946.842 kb on + strand at 946.842 kb on + strand at 946.842 kb on + strand at 946.842 kb on + strand at 946.842 kb on + strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.843 kb on - strand at 946.855 kb on + strand at 946.855 kb on + strand at 946.855 kb on + strand at 946.856 kb on - strand at 946.856 kb on - strand at 946.856 kb on - strand at 946.861 kb on + strand at 946.861 kb on + strand at 946.862 kb on - strand at 946.862 kb on - strand at 946.862 kb on - strand at 946.862 kb on - strand at 946.862 kb on - strand at 946.862 kb on - strand at 946.862 kb on - strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.863 kb on + strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.864 kb on - strand at 946.906 kb on + strand at 946.906 kb on + strand at 946.906 kb on + strand at 946.906 kb on + strand at 946.907 kb on - strand at 946.907 kb on - strand at 946.907 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 944,926 + +0.8 944,926 + -1.0 944,926 + -1.4 944,927 - -0.4 944,927 - -0.1 944,927 - -0.5 944,927 - -0.9 944,944 + +0.4 944,945 - +0.2 944,945 - +1.4 944,986 + -1.5 944,986 + -0.5 944,986 + -1.1 944,986 + +0.2 944,987 - +0.6 944,987 - -0.1 944,987 - -0.3 944,987 - -0.1 944,987 - -1.0 944,987 - -0.1 945,091 + -2.0 945,091 + +0.2 945,091 + +0.5 945,091 + -1.5 945,092 - -1.1 945,092 - +0.2 945,092 - -1.4 945,092 - -0.3 945,092 - +1.1 945,092 - -0.3 945,092 - -1.4 945,092 - +0.2 945,092 - -0.9 945,092 - -0.6 945,101 + +0.3 945,102 - -0.8 945,102 - -0.8 945,210 + +1.5 945,210 + -0.8 945,210 + -0.2 945,210 + -0.4 945,211 - -0.9 945,211 - -0.2 945,211 - -1.8 945,211 - +0.4 945,211 - -1.6 945,211 - +1.4 945,211 - -0.2 945,211 - -0.1 945,211 - +1.1 945,211 - +0.1 945,211 - -1.0 945,211 - +0.7 945,211 - -0.3 945,211 - -1.1 945,211 - -1.6 945,211 - +1.1 945,216 - +0.1 945,216 - +0.1 945,216 - -1.6 945,216 - -1.2 945,216 - -1.2 945,216 - -0.1 945,216 - -1.2 945,216 - +0.0 945,232 + -0.8 945,446 + MPMX19_00909 0.37 +1.2 945,446 + MPMX19_00909 0.37 -1.0 945,446 + MPMX19_00909 0.37 -1.1 945,494 + MPMX19_00909 0.46 -0.6 945,494 + MPMX19_00909 0.46 -2.6 945,494 + MPMX19_00909 0.46 +0.4 945,494 + MPMX19_00909 0.46 +0.3 945,494 + MPMX19_00909 0.46 +0.5 945,494 + MPMX19_00909 0.46 -0.5 945,495 - MPMX19_00909 0.47 -0.8 945,495 - MPMX19_00909 0.47 -1.4 945,495 - MPMX19_00909 0.47 +0.4 945,495 - MPMX19_00909 0.47 +0.5 945,495 - MPMX19_00909 0.47 -0.1 945,598 + MPMX19_00909 0.66 -1.0 945,598 + MPMX19_00909 0.66 +0.5 945,599 - MPMX19_00909 0.66 +0.9 945,599 - MPMX19_00909 0.66 -1.8 945,605 + MPMX19_00909 0.67 -0.6 945,605 + MPMX19_00909 0.67 +0.0 945,605 + MPMX19_00909 0.67 -0.5 945,605 + MPMX19_00909 0.67 +0.3 945,605 + MPMX19_00909 0.67 -1.2 945,606 - MPMX19_00909 0.67 +0.4 945,606 - MPMX19_00909 0.67 -0.9 945,606 - MPMX19_00909 0.67 +0.9 945,606 - MPMX19_00909 0.67 +0.4 945,606 - MPMX19_00909 0.67 -0.6 945,798 + +0.4 945,798 + -0.4 945,799 - -0.4 945,799 - +0.4 945,810 + +0.9 945,810 + -0.3 945,810 + +1.1 945,810 + -0.9 945,810 + +0.9 945,810 + +1.5 945,810 + -1.1 945,810 + -0.2 945,810 + -0.6 945,810 + -0.6 945,810 + -1.2 945,810 + -0.9 945,811 - +0.1 945,811 - +0.4 945,811 - +0.4 945,811 - -0.9 945,811 - +0.5 945,811 - +0.9 945,811 - -1.1 945,811 - -2.0 945,811 - -0.6 945,811 - -0.2 945,811 - +0.1 945,811 - -1.3 945,811 - -1.5 945,812 + -0.2 945,812 + -0.2 945,812 + -0.1 945,812 + -0.1 945,812 + -0.7 945,812 + -0.5 945,812 + -1.1 945,812 + -0.6 945,812 + +0.6 945,812 + +1.1 945,812 + -0.5 945,812 + +1.1 945,812 + -1.1 945,812 + -1.9 945,813 - +0.4 945,813 - -0.6 945,813 - +0.6 945,813 - -2.2 945,813 - -0.2 945,813 - -0.5 945,813 - -0.6 945,813 - -0.2 945,813 - +0.5 945,813 - -0.4 945,813 - +0.1 945,813 - -0.8 945,813 - -0.8 945,813 - -0.2 945,813 - -0.1 945,813 - -1.0 945,813 - +0.1 946,109 + MPMX19_00910 0.77 +1.4 946,109 + MPMX19_00910 0.77 +0.3 946,109 + MPMX19_00910 0.77 -0.4 946,109 + MPMX19_00910 0.77 -0.1 946,109 + MPMX19_00910 0.77 -0.6 946,109 + MPMX19_00910 0.77 -0.6 946,109 + MPMX19_00910 0.77 +0.5 946,109 + MPMX19_00910 0.77 +0.6 946,110 - MPMX19_00910 0.78 -0.7 946,110 - MPMX19_00910 0.78 -0.6 946,110 - MPMX19_00910 0.78 -1.1 946,110 - MPMX19_00910 0.78 +0.5 946,124 + MPMX19_00910 0.81 +0.2 946,125 - MPMX19_00910 0.82 -0.6 946,133 + MPMX19_00910 0.84 -0.1 946,133 + MPMX19_00910 0.84 -0.1 946,134 - MPMX19_00910 0.84 -0.5 946,134 - MPMX19_00910 0.84 -0.4 946,134 - MPMX19_00910 0.84 +1.9 946,134 - MPMX19_00910 0.84 -1.1 946,413 + MPMX19_00911 0.17 -0.4 946,414 - MPMX19_00911 0.17 -0.2 946,842 + +0.9 946,842 + +0.4 946,842 + +0.3 946,842 + +1.4 946,842 + +0.6 946,843 - +0.5 946,843 - -0.8 946,843 - +0.9 946,843 - +0.6 946,843 - +0.1 946,843 - +0.6 946,843 - +0.9 946,843 - -0.4 946,843 - +0.8 946,855 + -0.3 946,855 + +2.1 946,855 + -0.2 946,856 - -0.3 946,856 - +0.6 946,856 - -0.1 946,861 + -0.1 946,861 + -0.5 946,862 - +0.2 946,862 - +0.2 946,862 - +1.4 946,862 - +1.5 946,862 - +0.9 946,862 - -0.1 946,862 - -0.6 946,863 + +0.8 946,863 + -0.7 946,863 + -0.2 946,863 + -0.1 946,863 + -0.8 946,863 + -1.4 946,863 + -0.4 946,863 + +0.1 946,863 + -0.4 946,863 + -0.5 946,864 - +0.1 946,864 - -0.1 946,864 - +0.4 946,864 - -0.6 946,864 - +1.2 946,864 - -0.1 946,864 - +0.1 946,864 - +0.9 946,864 - -1.2 946,864 - +0.8 946,906 + -1.1 946,906 + -0.9 946,906 + +0.0 946,906 + +0.8 946,907 - +0.8 946,907 - -0.6 946,907 - -0.3
Or see this region's nucleotide sequence