Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00890 and MPMX19_00891 overlap by 4 nucleotides MPMX19_00891 and MPMX19_00892 overlap by 23 nucleotides MPMX19_00892 and MPMX19_00893 are separated by 413 nucleotides
MPMX19_00890: MPMX19_00890 - hypothetical protein, at 924,200 to 924,571
_00890
MPMX19_00891: MPMX19_00891 - hypothetical protein, at 924,568 to 925,380
_00891
MPMX19_00892: MPMX19_00892 - Thermostable carboxypeptidase 1, at 925,358 to 926,845
_00892
MPMX19_00893: MPMX19_00893 - Anthranilate synthase component 1, at 927,259 to 928,770
_00893
Position (kb) 925
926
927 Strain fitness (log2 ratio) -2
-1
0
1
2 at 924.534 kb on - strand at 924.534 kb on - strand at 924.828 kb on + strand, within MPMX19_00891 at 924.874 kb on + strand, within MPMX19_00891 at 924.874 kb on + strand, within MPMX19_00891 at 924.875 kb on - strand, within MPMX19_00891 at 925.124 kb on + strand, within MPMX19_00891 at 925.261 kb on + strand, within MPMX19_00891 at 925.261 kb on + strand, within MPMX19_00891 at 925.261 kb on + strand, within MPMX19_00891 at 925.261 kb on + strand, within MPMX19_00891 at 925.261 kb on + strand, within MPMX19_00891 at 925.261 kb on + strand, within MPMX19_00891 at 925.261 kb on + strand, within MPMX19_00891 at 925.261 kb on + strand, within MPMX19_00891 at 925.261 kb on + strand, within MPMX19_00891 at 925.261 kb on + strand, within MPMX19_00891 at 925.261 kb on + strand, within MPMX19_00891 at 925.262 kb on - strand, within MPMX19_00891 at 925.262 kb on - strand, within MPMX19_00891 at 925.262 kb on - strand, within MPMX19_00891 at 925.262 kb on - strand, within MPMX19_00891 at 925.262 kb on - strand, within MPMX19_00891 at 925.262 kb on - strand, within MPMX19_00891 at 925.262 kb on - strand, within MPMX19_00891 at 925.262 kb on - strand, within MPMX19_00891 at 925.262 kb on - strand, within MPMX19_00891 at 925.262 kb on - strand, within MPMX19_00891 at 925.262 kb on - strand, within MPMX19_00891 at 925.277 kb on - strand, within MPMX19_00891 at 925.306 kb on + strand at 925.306 kb on + strand at 925.306 kb on + strand at 925.306 kb on + strand at 925.306 kb on + strand at 925.307 kb on - strand at 925.307 kb on - strand at 925.307 kb on - strand at 925.367 kb on + strand at 925.367 kb on + strand at 925.367 kb on + strand at 925.367 kb on + strand at 925.367 kb on + strand at 925.367 kb on + strand at 925.367 kb on + strand at 925.367 kb on + strand at 925.368 kb on - strand at 925.368 kb on - strand at 925.368 kb on - strand at 925.368 kb on - strand at 925.368 kb on - strand at 925.368 kb on - strand at 925.721 kb on + strand, within MPMX19_00892 at 925.721 kb on + strand, within MPMX19_00892 at 925.721 kb on + strand, within MPMX19_00892 at 925.721 kb on + strand, within MPMX19_00892 at 925.721 kb on + strand, within MPMX19_00892 at 925.721 kb on + strand, within MPMX19_00892 at 925.721 kb on + strand, within MPMX19_00892 at 925.721 kb on + strand, within MPMX19_00892 at 925.722 kb on - strand, within MPMX19_00892 at 925.722 kb on - strand, within MPMX19_00892 at 925.722 kb on - strand, within MPMX19_00892 at 925.722 kb on - strand, within MPMX19_00892 at 925.722 kb on - strand, within MPMX19_00892 at 925.722 kb on - strand, within MPMX19_00892 at 925.811 kb on + strand, within MPMX19_00892 at 925.812 kb on - strand, within MPMX19_00892 at 925.812 kb on - strand, within MPMX19_00892 at 925.812 kb on - strand, within MPMX19_00892 at 926.102 kb on + strand, within MPMX19_00892 at 926.103 kb on - strand, within MPMX19_00892 at 926.103 kb on - strand, within MPMX19_00892 at 926.165 kb on + strand, within MPMX19_00892 at 926.165 kb on + strand, within MPMX19_00892 at 926.165 kb on + strand, within MPMX19_00892 at 926.165 kb on + strand, within MPMX19_00892 at 926.165 kb on + strand, within MPMX19_00892 at 926.166 kb on - strand, within MPMX19_00892 at 926.366 kb on + strand, within MPMX19_00892 at 926.366 kb on + strand, within MPMX19_00892 at 926.366 kb on + strand, within MPMX19_00892 at 926.366 kb on + strand, within MPMX19_00892 at 926.367 kb on - strand, within MPMX19_00892 at 926.367 kb on - strand, within MPMX19_00892 at 926.367 kb on - strand, within MPMX19_00892 at 926.417 kb on + strand, within MPMX19_00892 at 926.417 kb on + strand, within MPMX19_00892 at 926.418 kb on - strand, within MPMX19_00892 at 926.418 kb on - strand, within MPMX19_00892 at 926.418 kb on - strand, within MPMX19_00892 at 926.418 kb on - strand, within MPMX19_00892 at 926.418 kb on - strand, within MPMX19_00892 at 926.418 kb on - strand, within MPMX19_00892 at 926.441 kb on + strand, within MPMX19_00892 at 926.597 kb on + strand, within MPMX19_00892 at 926.597 kb on + strand, within MPMX19_00892 at 926.597 kb on + strand, within MPMX19_00892 at 926.598 kb on - strand, within MPMX19_00892 at 926.598 kb on - strand, within MPMX19_00892 at 926.598 kb on - strand, within MPMX19_00892 at 926.598 kb on - strand, within MPMX19_00892 at 926.598 kb on - strand, within MPMX19_00892 at 926.609 kb on + strand, within MPMX19_00892 at 926.609 kb on + strand, within MPMX19_00892 at 926.609 kb on + strand, within MPMX19_00892 at 926.609 kb on + strand, within MPMX19_00892 at 926.609 kb on + strand, within MPMX19_00892 at 926.610 kb on - strand, within MPMX19_00892 at 926.610 kb on - strand, within MPMX19_00892 at 926.610 kb on - strand, within MPMX19_00892 at 926.610 kb on - strand, within MPMX19_00892 at 926.610 kb on - strand, within MPMX19_00892 at 926.610 kb on - strand, within MPMX19_00892 at 926.610 kb on - strand, within MPMX19_00892 at 926.610 kb on - strand, within MPMX19_00892 at 926.837 kb on + strand at 926.838 kb on - strand at 926.838 kb on - strand at 926.838 kb on - strand at 926.838 kb on - strand at 926.900 kb on + strand at 926.900 kb on + strand at 926.900 kb on + strand at 926.900 kb on + strand at 926.900 kb on + strand at 927.092 kb on + strand at 927.092 kb on + strand at 927.092 kb on + strand at 927.092 kb on + strand at 927.092 kb on + strand at 927.092 kb on + strand at 927.093 kb on - strand at 927.093 kb on - strand at 927.093 kb on - strand at 927.093 kb on - strand at 927.093 kb on - strand at 927.093 kb on - strand at 927.093 kb on - strand at 927.093 kb on - strand at 927.093 kb on - strand at 927.093 kb on - strand at 927.093 kb on - strand at 927.095 kb on + strand at 927.095 kb on + strand at 927.095 kb on + strand at 927.095 kb on + strand at 927.095 kb on + strand at 927.095 kb on + strand at 927.096 kb on - strand at 927.097 kb on + strand at 927.097 kb on + strand at 927.097 kb on + strand at 927.098 kb on - strand at 927.098 kb on - strand at 927.127 kb on + strand at 927.335 kb on + strand at 927.335 kb on + strand at 927.335 kb on + strand at 927.336 kb on - strand at 927.336 kb on - strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.386 kb on + strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.387 kb on - strand at 927.458 kb on + strand, within MPMX19_00893 at 927.458 kb on + strand, within MPMX19_00893 at 927.458 kb on + strand, within MPMX19_00893 at 927.459 kb on - strand, within MPMX19_00893 at 927.459 kb on - strand, within MPMX19_00893 at 927.476 kb on + strand, within MPMX19_00893 at 927.476 kb on + strand, within MPMX19_00893 at 927.476 kb on + strand, within MPMX19_00893 at 927.477 kb on - strand, within MPMX19_00893 at 927.477 kb on - strand, within MPMX19_00893 at 927.477 kb on - strand, within MPMX19_00893 at 927.477 kb on - strand, within MPMX19_00893 at 927.644 kb on + strand, within MPMX19_00893 at 927.644 kb on + strand, within MPMX19_00893 at 927.645 kb on - strand, within MPMX19_00893 at 927.645 kb on - strand, within MPMX19_00893 at 927.645 kb on - strand, within MPMX19_00893 at 927.645 kb on - strand, within MPMX19_00893 at 927.645 kb on - strand, within MPMX19_00893 at 927.829 kb on - strand, within MPMX19_00893 at 927.829 kb on - strand, within MPMX19_00893
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 924,534 - -0.5 924,534 - -1.4 924,828 + MPMX19_00891 0.32 -2.2 924,874 + MPMX19_00891 0.38 -0.1 924,874 + MPMX19_00891 0.38 -0.6 924,875 - MPMX19_00891 0.38 -0.6 925,124 + MPMX19_00891 0.68 +1.9 925,261 + MPMX19_00891 0.85 -0.4 925,261 + MPMX19_00891 0.85 +0.6 925,261 + MPMX19_00891 0.85 -0.8 925,261 + MPMX19_00891 0.85 +1.7 925,261 + MPMX19_00891 0.85 +2.5 925,261 + MPMX19_00891 0.85 +1.4 925,261 + MPMX19_00891 0.85 -2.0 925,261 + MPMX19_00891 0.85 -0.6 925,261 + MPMX19_00891 0.85 -1.9 925,261 + MPMX19_00891 0.85 -0.8 925,261 + MPMX19_00891 0.85 +1.5 925,262 - MPMX19_00891 0.85 -1.1 925,262 - MPMX19_00891 0.85 -0.3 925,262 - MPMX19_00891 0.85 +0.9 925,262 - MPMX19_00891 0.85 -1.1 925,262 - MPMX19_00891 0.85 -1.0 925,262 - MPMX19_00891 0.85 -0.1 925,262 - MPMX19_00891 0.85 +0.6 925,262 - MPMX19_00891 0.85 +0.1 925,262 - MPMX19_00891 0.85 -1.0 925,262 - MPMX19_00891 0.85 -0.3 925,262 - MPMX19_00891 0.85 +1.1 925,277 - MPMX19_00891 0.87 -0.9 925,306 + +0.7 925,306 + +0.8 925,306 + -0.9 925,306 + +0.9 925,306 + +1.3 925,307 - -0.4 925,307 - -0.2 925,307 - -0.1 925,367 + +0.1 925,367 + +0.3 925,367 + -0.3 925,367 + +0.1 925,367 + +1.6 925,367 + +0.9 925,367 + -1.1 925,367 + -1.5 925,368 - +0.6 925,368 - -1.4 925,368 - -0.2 925,368 - -0.8 925,368 - +0.5 925,368 - -0.6 925,721 + MPMX19_00892 0.24 +0.2 925,721 + MPMX19_00892 0.24 -1.8 925,721 + MPMX19_00892 0.24 +0.9 925,721 + MPMX19_00892 0.24 -0.5 925,721 + MPMX19_00892 0.24 -0.2 925,721 + MPMX19_00892 0.24 -0.5 925,721 + MPMX19_00892 0.24 +0.8 925,721 + MPMX19_00892 0.24 -0.3 925,722 - MPMX19_00892 0.24 +0.2 925,722 - MPMX19_00892 0.24 -1.1 925,722 - MPMX19_00892 0.24 +0.7 925,722 - MPMX19_00892 0.24 -0.1 925,722 - MPMX19_00892 0.24 +0.2 925,722 - MPMX19_00892 0.24 -0.3 925,811 + MPMX19_00892 0.30 -1.1 925,812 - MPMX19_00892 0.31 +0.5 925,812 - MPMX19_00892 0.31 -0.8 925,812 - MPMX19_00892 0.31 +0.4 926,102 + MPMX19_00892 0.50 +0.7 926,103 - MPMX19_00892 0.50 -0.1 926,103 - MPMX19_00892 0.50 -1.5 926,165 + MPMX19_00892 0.54 -0.4 926,165 + MPMX19_00892 0.54 -0.3 926,165 + MPMX19_00892 0.54 -0.1 926,165 + MPMX19_00892 0.54 +0.3 926,165 + MPMX19_00892 0.54 -0.3 926,166 - MPMX19_00892 0.54 -1.6 926,366 + MPMX19_00892 0.68 -0.3 926,366 + MPMX19_00892 0.68 -0.2 926,366 + MPMX19_00892 0.68 +1.9 926,366 + MPMX19_00892 0.68 +0.5 926,367 - MPMX19_00892 0.68 +1.1 926,367 - MPMX19_00892 0.68 -0.6 926,367 - MPMX19_00892 0.68 -0.1 926,417 + MPMX19_00892 0.71 +0.8 926,417 + MPMX19_00892 0.71 -1.2 926,418 - MPMX19_00892 0.71 -0.9 926,418 - MPMX19_00892 0.71 +0.9 926,418 - MPMX19_00892 0.71 +0.9 926,418 - MPMX19_00892 0.71 +0.1 926,418 - MPMX19_00892 0.71 +0.1 926,418 - MPMX19_00892 0.71 -1.4 926,441 + MPMX19_00892 0.73 +1.4 926,597 + MPMX19_00892 0.83 -0.1 926,597 + MPMX19_00892 0.83 -0.3 926,597 + MPMX19_00892 0.83 +1.1 926,598 - MPMX19_00892 0.83 -0.3 926,598 - MPMX19_00892 0.83 -1.4 926,598 - MPMX19_00892 0.83 +0.5 926,598 - MPMX19_00892 0.83 +0.9 926,598 - MPMX19_00892 0.83 +0.5 926,609 + MPMX19_00892 0.84 -0.5 926,609 + MPMX19_00892 0.84 +1.2 926,609 + MPMX19_00892 0.84 -0.9 926,609 + MPMX19_00892 0.84 +0.1 926,609 + MPMX19_00892 0.84 -1.4 926,610 - MPMX19_00892 0.84 -0.0 926,610 - MPMX19_00892 0.84 -0.3 926,610 - MPMX19_00892 0.84 -0.7 926,610 - MPMX19_00892 0.84 +0.4 926,610 - MPMX19_00892 0.84 -0.2 926,610 - MPMX19_00892 0.84 +0.2 926,610 - MPMX19_00892 0.84 +0.7 926,610 - MPMX19_00892 0.84 -0.2 926,837 + -2.2 926,838 - +0.4 926,838 - -0.3 926,838 - -0.5 926,838 - -0.6 926,900 + +0.6 926,900 + +0.1 926,900 + -0.1 926,900 + +0.2 926,900 + -0.7 927,092 + -0.1 927,092 + +1.7 927,092 + -0.2 927,092 + +0.1 927,092 + +0.8 927,092 + +0.1 927,093 - +0.1 927,093 - -0.7 927,093 - -0.9 927,093 - -0.8 927,093 - -0.9 927,093 - -1.0 927,093 - -1.3 927,093 - -1.9 927,093 - -1.1 927,093 - +0.4 927,093 - -1.5 927,095 + +0.8 927,095 + +0.4 927,095 + -0.4 927,095 + -0.5 927,095 + -1.1 927,095 + -0.4 927,096 - -0.9 927,097 + -1.5 927,097 + +0.6 927,097 + +0.5 927,098 - -0.0 927,098 - -0.7 927,127 + +0.3 927,335 + -0.2 927,335 + -0.3 927,335 + +0.4 927,336 - -1.5 927,336 - -0.2 927,386 + -0.9 927,386 + -0.3 927,386 + -0.2 927,386 + +0.7 927,386 + +0.3 927,386 + -2.1 927,386 + +0.1 927,386 + +0.0 927,386 + -1.1 927,386 + -1.1 927,386 + +1.2 927,386 + -1.2 927,386 + -2.7 927,386 + -1.4 927,386 + -0.8 927,386 + -1.1 927,386 + -0.1 927,386 + -0.5 927,386 + +0.3 927,386 + +1.2 927,386 + -0.1 927,386 + -0.1 927,386 + +0.1 927,386 + -0.8 927,386 + -2.2 927,386 + -0.1 927,387 - +1.5 927,387 - +0.7 927,387 - -1.1 927,387 - -1.9 927,387 - -0.3 927,387 - +0.6 927,387 - -1.8 927,387 - +0.4 927,387 - -1.5 927,387 - -0.2 927,387 - -1.7 927,387 - +0.2 927,387 - -2.5 927,387 - +0.6 927,387 - +0.2 927,387 - -0.3 927,387 - +0.7 927,387 - +0.1 927,387 - -0.4 927,387 - +0.4 927,387 - -1.2 927,387 - +0.0 927,387 - -0.4 927,387 - -1.2 927,387 - -0.5 927,387 - -0.2 927,387 - -0.6 927,387 - +0.4 927,387 - +0.9 927,387 - -1.8 927,387 - -0.6 927,458 + MPMX19_00893 0.13 -0.6 927,458 + MPMX19_00893 0.13 +0.4 927,458 + MPMX19_00893 0.13 -1.1 927,459 - MPMX19_00893 0.13 -0.2 927,459 - MPMX19_00893 0.13 -1.1 927,476 + MPMX19_00893 0.14 +1.2 927,476 + MPMX19_00893 0.14 -2.2 927,476 + MPMX19_00893 0.14 +0.4 927,477 - MPMX19_00893 0.14 -1.4 927,477 - MPMX19_00893 0.14 +0.4 927,477 - MPMX19_00893 0.14 -0.8 927,477 - MPMX19_00893 0.14 +0.6 927,644 + MPMX19_00893 0.25 -1.1 927,644 + MPMX19_00893 0.25 -0.6 927,645 - MPMX19_00893 0.26 +0.7 927,645 - MPMX19_00893 0.26 -0.3 927,645 - MPMX19_00893 0.26 -0.2 927,645 - MPMX19_00893 0.26 -0.6 927,645 - MPMX19_00893 0.26 -0.1 927,829 - MPMX19_00893 0.38 +0.6 927,829 - MPMX19_00893 0.38 +0.2
Or see this region's nucleotide sequence