Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00812

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00809 and MPMX19_00810 are separated by 18 nucleotidesMPMX19_00810 and MPMX19_00811 are separated by 130 nucleotidesMPMX19_00811 and MPMX19_00812 are separated by 174 nucleotidesMPMX19_00812 and MPMX19_00813 overlap by 4 nucleotidesMPMX19_00813 and MPMX19_00814 are separated by 10 nucleotides MPMX19_00809: MPMX19_00809 - Autoinducer 2 sensor kinase/phosphatase LuxQ, at 832,755 to 833,966 _00809 MPMX19_00810: MPMX19_00810 - hypothetical protein, at 833,985 to 834,302 _00810 MPMX19_00811: MPMX19_00811 - Divalent-cation tolerance protein CutA, at 834,433 to 834,777 _00811 MPMX19_00812: MPMX19_00812 - Molybdopterin molybdenumtransferase, at 834,952 to 836,190 _00812 MPMX19_00813: MPMX19_00813 - HTH-type transcriptional regulator CysL, at 836,187 to 837,092 _00813 MPMX19_00814: MPMX19_00814 - hypothetical protein, at 837,103 to 838,461 _00814 Position (kb) 834 835 836 837Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 833.964 kb on + strandat 833.964 kb on + strandat 833.964 kb on + strandat 833.964 kb on + strandat 833.964 kb on + strandat 833.964 kb on + strandat 833.964 kb on + strandat 833.965 kb on - strandat 833.965 kb on - strandat 833.986 kb on + strandat 833.986 kb on + strandat 833.987 kb on - strandat 833.987 kb on - strandat 833.987 kb on - strandat 833.987 kb on - strandat 833.987 kb on - strandat 833.987 kb on - strandat 834.385 kb on + strandat 834.385 kb on + strandat 834.385 kb on + strandat 834.386 kb on - strandat 834.386 kb on - strandat 834.386 kb on - strandat 834.481 kb on + strand, within MPMX19_00811at 834.481 kb on + strand, within MPMX19_00811at 834.481 kb on + strand, within MPMX19_00811at 834.481 kb on + strand, within MPMX19_00811at 834.481 kb on + strand, within MPMX19_00811at 834.481 kb on + strand, within MPMX19_00811at 834.481 kb on + strand, within MPMX19_00811at 834.481 kb on + strand, within MPMX19_00811at 834.481 kb on + strand, within MPMX19_00811at 834.481 kb on + strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.482 kb on - strand, within MPMX19_00811at 834.483 kb on + strand, within MPMX19_00811at 834.483 kb on + strand, within MPMX19_00811at 834.483 kb on + strand, within MPMX19_00811at 834.483 kb on + strand, within MPMX19_00811at 834.483 kb on + strand, within MPMX19_00811at 834.483 kb on + strand, within MPMX19_00811at 834.483 kb on + strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.484 kb on - strand, within MPMX19_00811at 834.586 kb on + strand, within MPMX19_00811at 834.586 kb on + strand, within MPMX19_00811at 834.586 kb on + strand, within MPMX19_00811at 834.587 kb on - strand, within MPMX19_00811at 834.587 kb on - strand, within MPMX19_00811at 834.587 kb on - strand, within MPMX19_00811at 834.587 kb on - strand, within MPMX19_00811at 834.587 kb on - strand, within MPMX19_00811at 834.695 kb on - strand, within MPMX19_00811at 834.695 kb on - strand, within MPMX19_00811at 834.695 kb on - strand, within MPMX19_00811at 834.695 kb on - strand, within MPMX19_00811at 834.695 kb on - strand, within MPMX19_00811at 834.745 kb on + strandat 834.745 kb on + strandat 834.746 kb on - strandat 834.788 kb on + strandat 834.788 kb on + strandat 834.788 kb on + strandat 834.789 kb on - strandat 834.789 kb on - strandat 834.789 kb on - strandat 834.789 kb on - strandat 834.789 kb on - strandat 834.789 kb on - strandat 834.789 kb on - strandat 834.796 kb on + strandat 834.796 kb on + strandat 834.796 kb on + strandat 834.797 kb on - strandat 834.797 kb on - strandat 834.797 kb on - strandat 834.848 kb on - strandat 834.848 kb on - strandat 835.024 kb on + strandat 835.024 kb on + strandat 835.025 kb on - strandat 835.025 kb on - strandat 835.025 kb on - strandat 835.025 kb on - strandat 835.025 kb on - strandat 835.025 kb on - strandat 835.025 kb on - strandat 835.025 kb on - strandat 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.567 kb on + strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.568 kb on - strand, within MPMX19_00812at 835.582 kb on + strand, within MPMX19_00812at 835.582 kb on + strand, within MPMX19_00812at 835.582 kb on + strand, within MPMX19_00812at 835.582 kb on + strand, within MPMX19_00812at 835.582 kb on + strand, within MPMX19_00812at 835.583 kb on - strand, within MPMX19_00812at 836.535 kb on + strand, within MPMX19_00813at 836.535 kb on + strand, within MPMX19_00813at 836.536 kb on - strand, within MPMX19_00813at 836.536 kb on - strand, within MPMX19_00813at 836.536 kb on - strand, within MPMX19_00813at 837.132 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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833,964 + -0.8
833,964 + -0.5
833,964 + +0.0
833,964 + -0.3
833,964 + -1.0
833,964 + -0.1
833,964 + +0.6
833,965 - -0.7
833,965 - +0.2
833,986 + -0.0
833,986 + -0.1
833,987 - +0.5
833,987 - +0.8
833,987 - -0.2
833,987 - -0.8
833,987 - +0.2
833,987 - -0.5
834,385 + -1.6
834,385 + -1.4
834,385 + -1.5
834,386 - +1.7
834,386 - -0.4
834,386 - -0.2
834,481 + MPMX19_00811 0.14 +1.0
834,481 + MPMX19_00811 0.14 -0.4
834,481 + MPMX19_00811 0.14 +1.0
834,481 + MPMX19_00811 0.14 +0.7
834,481 + MPMX19_00811 0.14 -1.1
834,481 + MPMX19_00811 0.14 -0.2
834,481 + MPMX19_00811 0.14 -1.7
834,481 + MPMX19_00811 0.14 +1.0
834,481 + MPMX19_00811 0.14 +1.5
834,481 + MPMX19_00811 0.14 -0.4
834,482 - MPMX19_00811 0.14 -0.4
834,482 - MPMX19_00811 0.14 -0.7
834,482 - MPMX19_00811 0.14 +1.0
834,482 - MPMX19_00811 0.14 -1.4
834,482 - MPMX19_00811 0.14 -1.9
834,482 - MPMX19_00811 0.14 -1.2
834,482 - MPMX19_00811 0.14 +2.0
834,482 - MPMX19_00811 0.14 +0.5
834,482 - MPMX19_00811 0.14 +1.6
834,482 - MPMX19_00811 0.14 -0.3
834,482 - MPMX19_00811 0.14 -0.5
834,482 - MPMX19_00811 0.14 +1.0
834,482 - MPMX19_00811 0.14 -2.8
834,482 - MPMX19_00811 0.14 -0.1
834,482 - MPMX19_00811 0.14 +0.7
834,482 - MPMX19_00811 0.14 -0.8
834,482 - MPMX19_00811 0.14 -0.3
834,482 - MPMX19_00811 0.14 -0.0
834,483 + MPMX19_00811 0.14 -0.7
834,483 + MPMX19_00811 0.14 -0.8
834,483 + MPMX19_00811 0.14 +0.5
834,483 + MPMX19_00811 0.14 -0.3
834,483 + MPMX19_00811 0.14 -0.6
834,483 + MPMX19_00811 0.14 +1.5
834,483 + MPMX19_00811 0.14 -0.6
834,484 - MPMX19_00811 0.15 -1.0
834,484 - MPMX19_00811 0.15 -1.4
834,484 - MPMX19_00811 0.15 +0.5
834,484 - MPMX19_00811 0.15 +0.2
834,484 - MPMX19_00811 0.15 -0.5
834,484 - MPMX19_00811 0.15 +0.0
834,484 - MPMX19_00811 0.15 +0.2
834,484 - MPMX19_00811 0.15 +0.4
834,484 - MPMX19_00811 0.15 +0.5
834,484 - MPMX19_00811 0.15 -1.2
834,484 - MPMX19_00811 0.15 -1.5
834,484 - MPMX19_00811 0.15 -0.0
834,484 - MPMX19_00811 0.15 +0.8
834,484 - MPMX19_00811 0.15 -0.3
834,484 - MPMX19_00811 0.15 -0.8
834,484 - MPMX19_00811 0.15 -1.4
834,586 + MPMX19_00811 0.44 -0.6
834,586 + MPMX19_00811 0.44 -0.8
834,586 + MPMX19_00811 0.44 -1.8
834,587 - MPMX19_00811 0.45 -0.7
834,587 - MPMX19_00811 0.45 -0.8
834,587 - MPMX19_00811 0.45 +0.4
834,587 - MPMX19_00811 0.45 +0.8
834,587 - MPMX19_00811 0.45 +0.2
834,695 - MPMX19_00811 0.76 +0.4
834,695 - MPMX19_00811 0.76 +0.1
834,695 - MPMX19_00811 0.76 -1.0
834,695 - MPMX19_00811 0.76 -0.5
834,695 - MPMX19_00811 0.76 +0.4
834,745 + +2.5
834,745 + -0.9
834,746 - -1.2
834,788 + +0.1
834,788 + +1.0
834,788 + +0.8
834,789 - -0.4
834,789 - -0.7
834,789 - +0.4
834,789 - +0.4
834,789 - +0.2
834,789 - -0.4
834,789 - +0.6
834,796 + +1.5
834,796 + +0.2
834,796 + -0.6
834,797 - +0.3
834,797 - -1.6
834,797 - -1.0
834,848 - -0.3
834,848 - -2.2
835,024 + -1.0
835,024 + -1.8
835,025 - +0.5
835,025 - -1.2
835,025 - -0.3
835,025 - -0.9
835,025 - -0.1
835,025 - +0.2
835,025 - -0.4
835,025 - -0.8
835,567 + MPMX19_00812 0.50 -1.0
835,567 + MPMX19_00812 0.50 +0.5
835,567 + MPMX19_00812 0.50 +0.6
835,567 + MPMX19_00812 0.50 -0.5
835,567 + MPMX19_00812 0.50 +0.5
835,567 + MPMX19_00812 0.50 -1.7
835,567 + MPMX19_00812 0.50 +2.0
835,567 + MPMX19_00812 0.50 +0.8
835,567 + MPMX19_00812 0.50 +0.4
835,567 + MPMX19_00812 0.50 +0.5
835,567 + MPMX19_00812 0.50 -0.6
835,567 + MPMX19_00812 0.50 -0.6
835,567 + MPMX19_00812 0.50 -0.3
835,567 + MPMX19_00812 0.50 +0.4
835,567 + MPMX19_00812 0.50 +0.7
835,567 + MPMX19_00812 0.50 -1.7
835,567 + MPMX19_00812 0.50 -0.8
835,568 - MPMX19_00812 0.50 -0.2
835,568 - MPMX19_00812 0.50 +0.9
835,568 - MPMX19_00812 0.50 +0.1
835,568 - MPMX19_00812 0.50 +1.0
835,568 - MPMX19_00812 0.50 +0.5
835,568 - MPMX19_00812 0.50 -0.8
835,568 - MPMX19_00812 0.50 +1.0
835,568 - MPMX19_00812 0.50 -0.4
835,568 - MPMX19_00812 0.50 -0.4
835,568 - MPMX19_00812 0.50 +0.4
835,568 - MPMX19_00812 0.50 +1.1
835,568 - MPMX19_00812 0.50 -0.7
835,568 - MPMX19_00812 0.50 -0.2
835,568 - MPMX19_00812 0.50 +0.8
835,568 - MPMX19_00812 0.50 +2.0
835,568 - MPMX19_00812 0.50 +1.7
835,568 - MPMX19_00812 0.50 -0.3
835,568 - MPMX19_00812 0.50 -0.2
835,568 - MPMX19_00812 0.50 -1.9
835,568 - MPMX19_00812 0.50 +0.4
835,582 + MPMX19_00812 0.51 -1.1
835,582 + MPMX19_00812 0.51 -0.8
835,582 + MPMX19_00812 0.51 +0.2
835,582 + MPMX19_00812 0.51 +0.4
835,582 + MPMX19_00812 0.51 +0.2
835,583 - MPMX19_00812 0.51 -0.8
836,535 + MPMX19_00813 0.38 +0.2
836,535 + MPMX19_00813 0.38 +2.5
836,536 - MPMX19_00813 0.39 -0.0
836,536 - MPMX19_00813 0.39 -0.0
836,536 - MPMX19_00813 0.39 +0.4
837,132 - -0.5

Or see this region's nucleotide sequence