Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00807 and MPMX19_00808 are separated by 275 nucleotides MPMX19_00808 and MPMX19_00809 are separated by 314 nucleotides MPMX19_00809 and MPMX19_00810 are separated by 18 nucleotides MPMX19_00810 and MPMX19_00811 are separated by 130 nucleotides MPMX19_00811 and MPMX19_00812 are separated by 174 nucleotides
MPMX19_00807: MPMX19_00807 - Fumonisin B1 esterase, at 830,024 to 831,952
_00807
MPMX19_00808: MPMX19_00808 - hypothetical protein, at 832,228 to 832,440
_00808
MPMX19_00809: MPMX19_00809 - Autoinducer 2 sensor kinase/phosphatase LuxQ, at 832,755 to 833,966
_00809
MPMX19_00810: MPMX19_00810 - hypothetical protein, at 833,985 to 834,302
_00810
MPMX19_00811: MPMX19_00811 - Divalent-cation tolerance protein CutA, at 834,433 to 834,777
_00811
MPMX19_00812: MPMX19_00812 - Molybdopterin molybdenumtransferase, at 834,952 to 836,190
_00812
Position (kb) 832
833
834 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 831.934 kb on + strand at 831.988 kb on + strand at 832.027 kb on + strand at 832.191 kb on - strand at 832.191 kb on - strand at 832.191 kb on - strand at 832.200 kb on + strand at 832.200 kb on + strand at 832.200 kb on + strand at 832.201 kb on - strand at 832.201 kb on - strand at 832.201 kb on - strand at 832.201 kb on - strand at 832.201 kb on - strand at 832.201 kb on - strand at 832.201 kb on - strand at 832.201 kb on - strand at 832.201 kb on - strand at 832.201 kb on - strand at 832.234 kb on + strand at 832.235 kb on - strand at 832.235 kb on - strand at 832.416 kb on + strand, within MPMX19_00808 at 832.416 kb on + strand, within MPMX19_00808 at 832.417 kb on - strand, within MPMX19_00808 at 832.570 kb on + strand at 832.570 kb on + strand at 832.570 kb on + strand at 832.570 kb on + strand at 832.570 kb on + strand at 832.571 kb on - strand at 832.571 kb on - strand at 832.571 kb on - strand at 832.571 kb on - strand at 832.583 kb on + strand at 832.619 kb on + strand at 832.619 kb on + strand at 832.619 kb on + strand at 832.619 kb on + strand at 832.619 kb on + strand at 832.619 kb on + strand at 832.619 kb on + strand at 832.619 kb on + strand at 832.620 kb on - strand at 832.620 kb on - strand at 832.620 kb on - strand at 832.620 kb on - strand at 832.620 kb on - strand at 832.620 kb on - strand at 832.620 kb on - strand at 832.620 kb on - strand at 832.620 kb on - strand at 832.620 kb on - strand at 832.653 kb on + strand at 832.653 kb on + strand at 832.653 kb on + strand at 832.654 kb on - strand at 832.654 kb on - strand at 832.669 kb on + strand at 832.669 kb on + strand at 832.669 kb on + strand at 832.669 kb on + strand at 832.670 kb on - strand at 832.675 kb on + strand at 832.676 kb on - strand at 832.676 kb on - strand at 832.935 kb on - strand, within MPMX19_00809 at 832.935 kb on - strand, within MPMX19_00809 at 833.094 kb on + strand, within MPMX19_00809 at 833.094 kb on + strand, within MPMX19_00809 at 833.094 kb on + strand, within MPMX19_00809 at 833.094 kb on + strand, within MPMX19_00809 at 833.217 kb on + strand, within MPMX19_00809 at 833.217 kb on + strand, within MPMX19_00809 at 833.217 kb on + strand, within MPMX19_00809 at 833.218 kb on - strand, within MPMX19_00809 at 833.218 kb on - strand, within MPMX19_00809 at 833.218 kb on - strand, within MPMX19_00809 at 833.218 kb on - strand, within MPMX19_00809 at 833.218 kb on - strand, within MPMX19_00809 at 833.218 kb on - strand, within MPMX19_00809 at 833.727 kb on + strand, within MPMX19_00809 at 833.784 kb on + strand, within MPMX19_00809 at 833.784 kb on + strand, within MPMX19_00809 at 833.785 kb on - strand, within MPMX19_00809 at 833.785 kb on - strand, within MPMX19_00809 at 833.785 kb on - strand, within MPMX19_00809 at 833.964 kb on + strand at 833.964 kb on + strand at 833.964 kb on + strand at 833.964 kb on + strand at 833.964 kb on + strand at 833.964 kb on + strand at 833.964 kb on + strand at 833.965 kb on - strand at 833.965 kb on - strand at 833.986 kb on + strand at 833.986 kb on + strand at 833.987 kb on - strand at 833.987 kb on - strand at 833.987 kb on - strand at 833.987 kb on - strand at 833.987 kb on - strand at 833.987 kb on - strand at 834.385 kb on + strand at 834.385 kb on + strand at 834.385 kb on + strand at 834.386 kb on - strand at 834.386 kb on - strand at 834.386 kb on - strand at 834.481 kb on + strand, within MPMX19_00811 at 834.481 kb on + strand, within MPMX19_00811 at 834.481 kb on + strand, within MPMX19_00811 at 834.481 kb on + strand, within MPMX19_00811 at 834.481 kb on + strand, within MPMX19_00811 at 834.481 kb on + strand, within MPMX19_00811 at 834.481 kb on + strand, within MPMX19_00811 at 834.481 kb on + strand, within MPMX19_00811 at 834.481 kb on + strand, within MPMX19_00811 at 834.481 kb on + strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.482 kb on - strand, within MPMX19_00811 at 834.483 kb on + strand, within MPMX19_00811 at 834.483 kb on + strand, within MPMX19_00811 at 834.483 kb on + strand, within MPMX19_00811 at 834.483 kb on + strand, within MPMX19_00811 at 834.483 kb on + strand, within MPMX19_00811 at 834.483 kb on + strand, within MPMX19_00811 at 834.483 kb on + strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.484 kb on - strand, within MPMX19_00811 at 834.586 kb on + strand, within MPMX19_00811 at 834.586 kb on + strand, within MPMX19_00811 at 834.586 kb on + strand, within MPMX19_00811 at 834.587 kb on - strand, within MPMX19_00811 at 834.587 kb on - strand, within MPMX19_00811 at 834.587 kb on - strand, within MPMX19_00811 at 834.587 kb on - strand, within MPMX19_00811 at 834.587 kb on - strand, within MPMX19_00811 at 834.695 kb on - strand, within MPMX19_00811 at 834.695 kb on - strand, within MPMX19_00811 at 834.695 kb on - strand, within MPMX19_00811 at 834.695 kb on - strand, within MPMX19_00811 at 834.695 kb on - strand, within MPMX19_00811 at 834.745 kb on + strand at 834.745 kb on + strand at 834.746 kb on - strand at 834.788 kb on + strand at 834.788 kb on + strand at 834.788 kb on + strand at 834.789 kb on - strand at 834.789 kb on - strand at 834.789 kb on - strand at 834.789 kb on - strand at 834.789 kb on - strand at 834.789 kb on - strand at 834.789 kb on - strand at 834.796 kb on + strand at 834.796 kb on + strand at 834.796 kb on + strand at 834.797 kb on - strand at 834.797 kb on - strand at 834.797 kb on - strand at 834.848 kb on - strand at 834.848 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 831,934 + +0.2 831,988 + -1.6 832,027 + -0.8 832,191 - -0.8 832,191 - +0.5 832,191 - -0.6 832,200 + -0.5 832,200 + +0.1 832,200 + -0.4 832,201 - -1.1 832,201 - -0.0 832,201 - -0.2 832,201 - +0.1 832,201 - +0.5 832,201 - +0.7 832,201 - -0.8 832,201 - -2.1 832,201 - -0.2 832,201 - +0.5 832,234 + -0.4 832,235 - -0.5 832,235 - -0.2 832,416 + MPMX19_00808 0.88 +0.5 832,416 + MPMX19_00808 0.88 -1.4 832,417 - MPMX19_00808 0.89 -1.0 832,570 + -0.1 832,570 + +1.1 832,570 + -1.0 832,570 + -0.5 832,570 + +1.5 832,571 - +0.4 832,571 - -0.4 832,571 - -0.2 832,571 - +0.1 832,583 + +0.4 832,619 + +0.1 832,619 + +1.7 832,619 + -1.5 832,619 + +0.8 832,619 + -1.0 832,619 + -0.6 832,619 + -1.7 832,619 + +0.2 832,620 - -1.3 832,620 - +0.5 832,620 - -0.5 832,620 - +1.2 832,620 - -0.3 832,620 - -1.0 832,620 - +0.7 832,620 - -0.0 832,620 - -1.3 832,620 - -0.0 832,653 + +0.1 832,653 + -0.8 832,653 + -0.1 832,654 - +0.7 832,654 - +0.4 832,669 + -0.9 832,669 + +0.5 832,669 + -0.4 832,669 + -0.1 832,670 - -1.2 832,675 + -0.0 832,676 - -0.0 832,676 - -1.5 832,935 - MPMX19_00809 0.15 +0.4 832,935 - MPMX19_00809 0.15 -1.2 833,094 + MPMX19_00809 0.28 -0.5 833,094 + MPMX19_00809 0.28 -1.9 833,094 + MPMX19_00809 0.28 +1.0 833,094 + MPMX19_00809 0.28 -0.6 833,217 + MPMX19_00809 0.38 -0.6 833,217 + MPMX19_00809 0.38 -1.0 833,217 + MPMX19_00809 0.38 -0.2 833,218 - MPMX19_00809 0.38 +0.7 833,218 - MPMX19_00809 0.38 -0.8 833,218 - MPMX19_00809 0.38 -0.9 833,218 - MPMX19_00809 0.38 -0.7 833,218 - MPMX19_00809 0.38 -0.1 833,218 - MPMX19_00809 0.38 -1.2 833,727 + MPMX19_00809 0.80 +0.2 833,784 + MPMX19_00809 0.85 +0.4 833,784 + MPMX19_00809 0.85 -0.4 833,785 - MPMX19_00809 0.85 +0.2 833,785 - MPMX19_00809 0.85 +0.2 833,785 - MPMX19_00809 0.85 -0.6 833,964 + -0.8 833,964 + -0.5 833,964 + +0.0 833,964 + -0.3 833,964 + -1.0 833,964 + -0.1 833,964 + +0.6 833,965 - -0.7 833,965 - +0.2 833,986 + -0.0 833,986 + -0.1 833,987 - +0.5 833,987 - +0.8 833,987 - -0.2 833,987 - -0.8 833,987 - +0.2 833,987 - -0.5 834,385 + -1.6 834,385 + -1.4 834,385 + -1.5 834,386 - +1.7 834,386 - -0.4 834,386 - -0.2 834,481 + MPMX19_00811 0.14 +1.0 834,481 + MPMX19_00811 0.14 -0.4 834,481 + MPMX19_00811 0.14 +1.0 834,481 + MPMX19_00811 0.14 +0.7 834,481 + MPMX19_00811 0.14 -1.1 834,481 + MPMX19_00811 0.14 -0.2 834,481 + MPMX19_00811 0.14 -1.7 834,481 + MPMX19_00811 0.14 +1.0 834,481 + MPMX19_00811 0.14 +1.5 834,481 + MPMX19_00811 0.14 -0.4 834,482 - MPMX19_00811 0.14 -0.4 834,482 - MPMX19_00811 0.14 -0.7 834,482 - MPMX19_00811 0.14 +1.0 834,482 - MPMX19_00811 0.14 -1.4 834,482 - MPMX19_00811 0.14 -1.9 834,482 - MPMX19_00811 0.14 -1.2 834,482 - MPMX19_00811 0.14 +2.0 834,482 - MPMX19_00811 0.14 +0.5 834,482 - MPMX19_00811 0.14 +1.6 834,482 - MPMX19_00811 0.14 -0.3 834,482 - MPMX19_00811 0.14 -0.5 834,482 - MPMX19_00811 0.14 +1.0 834,482 - MPMX19_00811 0.14 -2.8 834,482 - MPMX19_00811 0.14 -0.1 834,482 - MPMX19_00811 0.14 +0.7 834,482 - MPMX19_00811 0.14 -0.8 834,482 - MPMX19_00811 0.14 -0.3 834,482 - MPMX19_00811 0.14 -0.0 834,483 + MPMX19_00811 0.14 -0.7 834,483 + MPMX19_00811 0.14 -0.8 834,483 + MPMX19_00811 0.14 +0.5 834,483 + MPMX19_00811 0.14 -0.3 834,483 + MPMX19_00811 0.14 -0.6 834,483 + MPMX19_00811 0.14 +1.5 834,483 + MPMX19_00811 0.14 -0.6 834,484 - MPMX19_00811 0.15 -1.0 834,484 - MPMX19_00811 0.15 -1.4 834,484 - MPMX19_00811 0.15 +0.5 834,484 - MPMX19_00811 0.15 +0.2 834,484 - MPMX19_00811 0.15 -0.5 834,484 - MPMX19_00811 0.15 +0.0 834,484 - MPMX19_00811 0.15 +0.2 834,484 - MPMX19_00811 0.15 +0.4 834,484 - MPMX19_00811 0.15 +0.5 834,484 - MPMX19_00811 0.15 -1.2 834,484 - MPMX19_00811 0.15 -1.5 834,484 - MPMX19_00811 0.15 -0.0 834,484 - MPMX19_00811 0.15 +0.8 834,484 - MPMX19_00811 0.15 -0.3 834,484 - MPMX19_00811 0.15 -0.8 834,484 - MPMX19_00811 0.15 -1.4 834,586 + MPMX19_00811 0.44 -0.6 834,586 + MPMX19_00811 0.44 -0.8 834,586 + MPMX19_00811 0.44 -1.8 834,587 - MPMX19_00811 0.45 -0.7 834,587 - MPMX19_00811 0.45 -0.8 834,587 - MPMX19_00811 0.45 +0.4 834,587 - MPMX19_00811 0.45 +0.8 834,587 - MPMX19_00811 0.45 +0.2 834,695 - MPMX19_00811 0.76 +0.4 834,695 - MPMX19_00811 0.76 +0.1 834,695 - MPMX19_00811 0.76 -1.0 834,695 - MPMX19_00811 0.76 -0.5 834,695 - MPMX19_00811 0.76 +0.4 834,745 + +2.5 834,745 + -0.9 834,746 - -1.2 834,788 + +0.1 834,788 + +1.0 834,788 + +0.8 834,789 - -0.4 834,789 - -0.7 834,789 - +0.4 834,789 - +0.4 834,789 - +0.2 834,789 - -0.4 834,789 - +0.6 834,796 + +1.5 834,796 + +0.2 834,796 + -0.6 834,797 - +0.3 834,797 - -1.6 834,797 - -1.0 834,848 - -0.3 834,848 - -2.2
Or see this region's nucleotide sequence