Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00803 and MPMX19_00804 are separated by 293 nucleotides MPMX19_00804 and MPMX19_00805 overlap by 1 nucleotides
MPMX19_00803: MPMX19_00803 - hypothetical protein, at 823,895 to 825,967
_00803
MPMX19_00804: MPMX19_00804 - Glutamate-pyruvate aminotransferase AlaC, at 826,261 to 827,535
_00804
MPMX19_00805: MPMX19_00805 - Homoserine dehydrogenase, at 827,535 to 828,839
_00805
Position (kb) 826
827
828 Strain fitness (log2 ratio) -2
-1
0
1
2 at 825.291 kb on + strand, within MPMX19_00803 at 825.291 kb on + strand, within MPMX19_00803 at 825.291 kb on + strand, within MPMX19_00803 at 825.291 kb on + strand, within MPMX19_00803 at 825.291 kb on + strand, within MPMX19_00803 at 825.291 kb on + strand, within MPMX19_00803 at 825.291 kb on + strand, within MPMX19_00803 at 825.291 kb on + strand, within MPMX19_00803 at 825.291 kb on + strand, within MPMX19_00803 at 825.291 kb on + strand, within MPMX19_00803 at 825.291 kb on + strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.292 kb on - strand, within MPMX19_00803 at 825.504 kb on + strand, within MPMX19_00803 at 825.504 kb on + strand, within MPMX19_00803 at 825.504 kb on + strand, within MPMX19_00803 at 825.504 kb on + strand, within MPMX19_00803 at 825.504 kb on + strand, within MPMX19_00803 at 825.504 kb on + strand, within MPMX19_00803 at 825.504 kb on + strand, within MPMX19_00803 at 825.504 kb on + strand, within MPMX19_00803 at 825.504 kb on + strand, within MPMX19_00803 at 825.504 kb on + strand, within MPMX19_00803 at 825.504 kb on + strand, within MPMX19_00803 at 825.505 kb on - strand, within MPMX19_00803 at 825.505 kb on - strand, within MPMX19_00803 at 825.505 kb on - strand, within MPMX19_00803 at 825.505 kb on - strand, within MPMX19_00803 at 825.505 kb on - strand, within MPMX19_00803 at 825.505 kb on - strand, within MPMX19_00803 at 825.505 kb on - strand, within MPMX19_00803 at 825.505 kb on - strand, within MPMX19_00803 at 825.505 kb on - strand, within MPMX19_00803 at 825.970 kb on + strand at 825.970 kb on + strand at 825.970 kb on + strand at 825.970 kb on + strand at 825.970 kb on + strand at 825.970 kb on + strand at 825.971 kb on - strand at 825.971 kb on - strand at 825.971 kb on - strand at 825.971 kb on - strand at 825.971 kb on - strand at 826.027 kb on + strand at 826.027 kb on + strand at 826.027 kb on + strand at 826.027 kb on + strand at 826.027 kb on + strand at 826.028 kb on - strand at 826.028 kb on - strand at 826.028 kb on - strand at 826.028 kb on - strand at 826.028 kb on - strand at 826.028 kb on - strand at 826.028 kb on - strand at 826.028 kb on - strand at 826.028 kb on - strand at 826.036 kb on + strand at 826.036 kb on + strand at 826.036 kb on + strand at 826.036 kb on + strand at 826.037 kb on - strand at 826.037 kb on - strand at 826.037 kb on - strand at 826.037 kb on - strand at 826.037 kb on - strand at 826.037 kb on - strand at 826.055 kb on + strand at 826.055 kb on + strand at 826.055 kb on + strand at 826.055 kb on + strand at 826.056 kb on - strand at 826.056 kb on - strand at 826.056 kb on - strand at 826.056 kb on - strand at 826.088 kb on + strand at 826.089 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 825,291 + MPMX19_00803 0.67 +0.4 825,291 + MPMX19_00803 0.67 -0.6 825,291 + MPMX19_00803 0.67 -1.0 825,291 + MPMX19_00803 0.67 -0.8 825,291 + MPMX19_00803 0.67 -0.9 825,291 + MPMX19_00803 0.67 -0.8 825,291 + MPMX19_00803 0.67 -1.2 825,291 + MPMX19_00803 0.67 +0.6 825,291 + MPMX19_00803 0.67 +0.2 825,291 + MPMX19_00803 0.67 -1.4 825,291 + MPMX19_00803 0.67 +0.6 825,292 - MPMX19_00803 0.67 +0.1 825,292 - MPMX19_00803 0.67 +0.8 825,292 - MPMX19_00803 0.67 -0.8 825,292 - MPMX19_00803 0.67 -0.8 825,292 - MPMX19_00803 0.67 +1.0 825,292 - MPMX19_00803 0.67 -0.5 825,292 - MPMX19_00803 0.67 +1.0 825,292 - MPMX19_00803 0.67 -1.0 825,292 - MPMX19_00803 0.67 +0.3 825,292 - MPMX19_00803 0.67 +0.2 825,292 - MPMX19_00803 0.67 -1.2 825,292 - MPMX19_00803 0.67 +0.3 825,292 - MPMX19_00803 0.67 -0.8 825,292 - MPMX19_00803 0.67 +0.8 825,292 - MPMX19_00803 0.67 +0.8 825,292 - MPMX19_00803 0.67 -0.4 825,504 + MPMX19_00803 0.78 +1.2 825,504 + MPMX19_00803 0.78 -0.1 825,504 + MPMX19_00803 0.78 -1.0 825,504 + MPMX19_00803 0.78 -1.6 825,504 + MPMX19_00803 0.78 +0.2 825,504 + MPMX19_00803 0.78 -1.7 825,504 + MPMX19_00803 0.78 -2.5 825,504 + MPMX19_00803 0.78 +0.7 825,504 + MPMX19_00803 0.78 +1.0 825,504 + MPMX19_00803 0.78 +0.2 825,504 + MPMX19_00803 0.78 -0.1 825,505 - MPMX19_00803 0.78 -0.9 825,505 - MPMX19_00803 0.78 -0.8 825,505 - MPMX19_00803 0.78 +1.0 825,505 - MPMX19_00803 0.78 -0.9 825,505 - MPMX19_00803 0.78 -1.0 825,505 - MPMX19_00803 0.78 +0.0 825,505 - MPMX19_00803 0.78 -1.0 825,505 - MPMX19_00803 0.78 +0.1 825,505 - MPMX19_00803 0.78 -0.0 825,970 + -1.2 825,970 + -0.6 825,970 + -0.0 825,970 + -2.4 825,970 + +1.4 825,970 + +2.0 825,971 - -0.7 825,971 - -0.8 825,971 - +1.0 825,971 - -1.1 825,971 - -1.2 826,027 + +0.9 826,027 + -0.0 826,027 + -0.0 826,027 + -0.2 826,027 + -0.9 826,028 - +1.6 826,028 - -0.2 826,028 - -2.3 826,028 - -0.6 826,028 - -0.0 826,028 - -0.0 826,028 - -1.1 826,028 - -1.0 826,028 - +0.1 826,036 + +0.3 826,036 + +1.7 826,036 + -1.4 826,036 + -1.0 826,037 - +0.4 826,037 - -0.2 826,037 - -1.0 826,037 - -2.0 826,037 - -0.4 826,037 - +1.4 826,055 + +1.0 826,055 + -0.8 826,055 + +0.8 826,055 + +1.1 826,056 - -1.2 826,056 - -0.8 826,056 - -0.6 826,056 - +0.4 826,088 + +1.0 826,089 - -0.6
Or see this region's nucleotide sequence