Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00784 and MPMX19_00785 are separated by 485 nucleotides MPMX19_00785 and MPMX19_00786 are separated by 234 nucleotides
MPMX19_00784: MPMX19_00784 - Biotin carboxylase, at 802,154 to 803,494
_00784
MPMX19_00785: MPMX19_00785 - hypothetical protein, at 803,980 to 806,463
_00785
MPMX19_00786: MPMX19_00786 - Adaptive-response sensory-kinase SasA, at 806,698 to 808,338
_00786
Position (kb) 803
804
805
806
807 Strain fitness (log2 ratio) -2
-1
0
1
2 at 803.653 kb on - strand at 803.744 kb on + strand at 803.826 kb on + strand at 803.835 kb on + strand at 803.835 kb on + strand at 803.835 kb on + strand at 803.836 kb on - strand at 803.836 kb on - strand at 803.836 kb on - strand at 803.836 kb on - strand at 803.836 kb on - strand at 803.836 kb on - strand at 803.856 kb on - strand at 803.856 kb on - strand at 803.856 kb on - strand at 803.856 kb on - strand at 804.106 kb on + strand at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.256 kb on + strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.257 kb on - strand, within MPMX19_00785 at 804.367 kb on + strand, within MPMX19_00785 at 804.368 kb on - strand, within MPMX19_00785 at 804.368 kb on - strand, within MPMX19_00785 at 804.368 kb on - strand, within MPMX19_00785 at 804.368 kb on - strand, within MPMX19_00785 at 804.368 kb on - strand, within MPMX19_00785 at 804.580 kb on + strand, within MPMX19_00785 at 804.580 kb on + strand, within MPMX19_00785 at 804.580 kb on + strand, within MPMX19_00785 at 804.580 kb on + strand, within MPMX19_00785 at 804.580 kb on + strand, within MPMX19_00785 at 804.580 kb on + strand, within MPMX19_00785 at 804.580 kb on + strand, within MPMX19_00785 at 804.580 kb on + strand, within MPMX19_00785 at 804.580 kb on + strand, within MPMX19_00785 at 804.581 kb on - strand, within MPMX19_00785 at 804.581 kb on - strand, within MPMX19_00785 at 804.581 kb on - strand, within MPMX19_00785 at 804.581 kb on - strand, within MPMX19_00785 at 804.581 kb on - strand, within MPMX19_00785 at 804.581 kb on - strand, within MPMX19_00785 at 804.581 kb on - strand, within MPMX19_00785 at 804.581 kb on - strand, within MPMX19_00785 at 804.581 kb on - strand, within MPMX19_00785 at 804.581 kb on - strand, within MPMX19_00785 at 804.591 kb on + strand, within MPMX19_00785 at 804.591 kb on + strand, within MPMX19_00785 at 804.591 kb on + strand, within MPMX19_00785 at 804.591 kb on + strand, within MPMX19_00785 at 804.591 kb on + strand, within MPMX19_00785 at 804.591 kb on + strand, within MPMX19_00785 at 804.592 kb on - strand, within MPMX19_00785 at 804.592 kb on - strand, within MPMX19_00785 at 804.592 kb on - strand, within MPMX19_00785 at 804.592 kb on - strand, within MPMX19_00785 at 804.592 kb on - strand, within MPMX19_00785 at 804.630 kb on + strand, within MPMX19_00785 at 804.630 kb on + strand, within MPMX19_00785 at 804.630 kb on + strand, within MPMX19_00785 at 804.630 kb on + strand, within MPMX19_00785 at 804.630 kb on + strand, within MPMX19_00785 at 804.630 kb on + strand, within MPMX19_00785 at 804.630 kb on + strand, within MPMX19_00785 at 804.630 kb on + strand, within MPMX19_00785 at 804.630 kb on + strand, within MPMX19_00785 at 804.630 kb on + strand, within MPMX19_00785 at 804.630 kb on + strand, within MPMX19_00785 at 804.630 kb on + strand, within MPMX19_00785 at 804.631 kb on - strand, within MPMX19_00785 at 804.631 kb on - strand, within MPMX19_00785 at 804.631 kb on - strand, within MPMX19_00785 at 804.631 kb on - strand, within MPMX19_00785 at 804.631 kb on - strand, within MPMX19_00785 at 804.631 kb on - strand, within MPMX19_00785 at 804.631 kb on - strand, within MPMX19_00785 at 804.631 kb on - strand, within MPMX19_00785 at 804.631 kb on - strand, within MPMX19_00785 at 804.631 kb on - strand, within MPMX19_00785 at 804.631 kb on - strand, within MPMX19_00785 at 804.763 kb on + strand, within MPMX19_00785 at 804.763 kb on + strand, within MPMX19_00785 at 804.763 kb on + strand, within MPMX19_00785 at 804.763 kb on + strand, within MPMX19_00785 at 804.763 kb on + strand, within MPMX19_00785 at 804.764 kb on - strand, within MPMX19_00785 at 804.764 kb on - strand, within MPMX19_00785 at 804.764 kb on - strand, within MPMX19_00785 at 804.764 kb on - strand, within MPMX19_00785 at 804.764 kb on - strand, within MPMX19_00785 at 804.764 kb on - strand, within MPMX19_00785 at 804.764 kb on - strand, within MPMX19_00785 at 804.764 kb on - strand, within MPMX19_00785 at 804.764 kb on - strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.994 kb on + strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 804.995 kb on - strand, within MPMX19_00785 at 805.243 kb on + strand, within MPMX19_00785 at 805.243 kb on + strand, within MPMX19_00785 at 805.243 kb on + strand, within MPMX19_00785 at 805.243 kb on + strand, within MPMX19_00785 at 805.243 kb on + strand, within MPMX19_00785 at 805.243 kb on + strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.244 kb on - strand, within MPMX19_00785 at 805.993 kb on + strand, within MPMX19_00785 at 805.993 kb on + strand, within MPMX19_00785 at 805.993 kb on + strand, within MPMX19_00785 at 805.993 kb on + strand, within MPMX19_00785 at 805.993 kb on + strand, within MPMX19_00785 at 805.994 kb on - strand, within MPMX19_00785 at 805.994 kb on - strand, within MPMX19_00785 at 805.994 kb on - strand, within MPMX19_00785 at 806.317 kb on + strand at 806.516 kb on + strand at 806.516 kb on + strand at 806.517 kb on - strand at 806.517 kb on - strand at 806.549 kb on + strand at 806.550 kb on - strand at 806.597 kb on + strand at 806.597 kb on + strand at 806.597 kb on + strand at 806.598 kb on - strand at 806.651 kb on + strand at 806.651 kb on + strand at 806.652 kb on - strand at 806.824 kb on + strand at 806.824 kb on + strand at 806.824 kb on + strand at 806.824 kb on + strand at 806.824 kb on + strand at 806.824 kb on + strand at 806.824 kb on + strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 807.016 kb on + strand, within MPMX19_00786 at 807.165 kb on + strand, within MPMX19_00786 at 807.457 kb on + strand, within MPMX19_00786 at 807.457 kb on + strand, within MPMX19_00786 at 807.457 kb on + strand, within MPMX19_00786 at 807.457 kb on + strand, within MPMX19_00786 at 807.457 kb on + strand, within MPMX19_00786 at 807.457 kb on + strand, within MPMX19_00786
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 803,653 - -0.3 803,744 + -0.0 803,826 + -0.6 803,835 + -0.4 803,835 + -1.6 803,835 + -1.8 803,836 - -1.2 803,836 - +0.1 803,836 - -1.5 803,836 - -0.2 803,836 - +0.2 803,836 - -0.6 803,856 - +1.1 803,856 - -1.6 803,856 - +0.7 803,856 - +1.0 804,106 + -1.0 804,256 + MPMX19_00785 0.11 -0.6 804,256 + MPMX19_00785 0.11 -2.5 804,256 + MPMX19_00785 0.11 -0.0 804,256 + MPMX19_00785 0.11 +0.6 804,256 + MPMX19_00785 0.11 -1.3 804,256 + MPMX19_00785 0.11 -0.5 804,256 + MPMX19_00785 0.11 +1.0 804,256 + MPMX19_00785 0.11 -0.8 804,256 + MPMX19_00785 0.11 -0.8 804,256 + MPMX19_00785 0.11 +0.1 804,256 + MPMX19_00785 0.11 +0.0 804,256 + MPMX19_00785 0.11 +1.1 804,256 + MPMX19_00785 0.11 -0.2 804,256 + MPMX19_00785 0.11 +0.4 804,256 + MPMX19_00785 0.11 -0.3 804,256 + MPMX19_00785 0.11 -0.8 804,257 - MPMX19_00785 0.11 +0.4 804,257 - MPMX19_00785 0.11 +0.3 804,257 - MPMX19_00785 0.11 -0.7 804,257 - MPMX19_00785 0.11 -0.0 804,257 - MPMX19_00785 0.11 +0.6 804,257 - MPMX19_00785 0.11 -0.5 804,257 - MPMX19_00785 0.11 -0.2 804,257 - MPMX19_00785 0.11 -2.2 804,257 - MPMX19_00785 0.11 -2.1 804,257 - MPMX19_00785 0.11 -0.9 804,257 - MPMX19_00785 0.11 +0.2 804,257 - MPMX19_00785 0.11 +0.6 804,257 - MPMX19_00785 0.11 -1.3 804,257 - MPMX19_00785 0.11 +0.4 804,367 + MPMX19_00785 0.16 +0.1 804,368 - MPMX19_00785 0.16 -0.9 804,368 - MPMX19_00785 0.16 -1.6 804,368 - MPMX19_00785 0.16 -0.6 804,368 - MPMX19_00785 0.16 +0.4 804,368 - MPMX19_00785 0.16 -0.8 804,580 + MPMX19_00785 0.24 -0.7 804,580 + MPMX19_00785 0.24 -0.6 804,580 + MPMX19_00785 0.24 -0.7 804,580 + MPMX19_00785 0.24 -1.0 804,580 + MPMX19_00785 0.24 +1.4 804,580 + MPMX19_00785 0.24 +0.4 804,580 + MPMX19_00785 0.24 +0.0 804,580 + MPMX19_00785 0.24 -1.2 804,580 + MPMX19_00785 0.24 -0.6 804,581 - MPMX19_00785 0.24 +1.0 804,581 - MPMX19_00785 0.24 +0.1 804,581 - MPMX19_00785 0.24 -2.0 804,581 - MPMX19_00785 0.24 -0.2 804,581 - MPMX19_00785 0.24 +0.1 804,581 - MPMX19_00785 0.24 -0.5 804,581 - MPMX19_00785 0.24 -0.8 804,581 - MPMX19_00785 0.24 -1.7 804,581 - MPMX19_00785 0.24 -0.4 804,581 - MPMX19_00785 0.24 -1.2 804,591 + MPMX19_00785 0.25 -0.0 804,591 + MPMX19_00785 0.25 -0.6 804,591 + MPMX19_00785 0.25 -1.5 804,591 + MPMX19_00785 0.25 -0.8 804,591 + MPMX19_00785 0.25 +0.0 804,591 + MPMX19_00785 0.25 -1.8 804,592 - MPMX19_00785 0.25 -0.4 804,592 - MPMX19_00785 0.25 -0.7 804,592 - MPMX19_00785 0.25 -0.1 804,592 - MPMX19_00785 0.25 -0.8 804,592 - MPMX19_00785 0.25 -1.0 804,630 + MPMX19_00785 0.26 -0.9 804,630 + MPMX19_00785 0.26 -0.5 804,630 + MPMX19_00785 0.26 +1.0 804,630 + MPMX19_00785 0.26 -0.5 804,630 + MPMX19_00785 0.26 +0.6 804,630 + MPMX19_00785 0.26 -1.8 804,630 + MPMX19_00785 0.26 +0.5 804,630 + MPMX19_00785 0.26 -1.5 804,630 + MPMX19_00785 0.26 -1.9 804,630 + MPMX19_00785 0.26 +0.5 804,630 + MPMX19_00785 0.26 -0.0 804,630 + MPMX19_00785 0.26 +1.1 804,631 - MPMX19_00785 0.26 -0.6 804,631 - MPMX19_00785 0.26 -0.2 804,631 - MPMX19_00785 0.26 -0.0 804,631 - MPMX19_00785 0.26 -2.0 804,631 - MPMX19_00785 0.26 +0.2 804,631 - MPMX19_00785 0.26 +0.4 804,631 - MPMX19_00785 0.26 -0.0 804,631 - MPMX19_00785 0.26 -2.1 804,631 - MPMX19_00785 0.26 -1.2 804,631 - MPMX19_00785 0.26 -0.1 804,631 - MPMX19_00785 0.26 +1.2 804,763 + MPMX19_00785 0.32 -0.1 804,763 + MPMX19_00785 0.32 +0.4 804,763 + MPMX19_00785 0.32 +1.2 804,763 + MPMX19_00785 0.32 -0.7 804,763 + MPMX19_00785 0.32 -0.9 804,764 - MPMX19_00785 0.32 -0.3 804,764 - MPMX19_00785 0.32 +0.5 804,764 - MPMX19_00785 0.32 +0.2 804,764 - MPMX19_00785 0.32 -2.0 804,764 - MPMX19_00785 0.32 -1.4 804,764 - MPMX19_00785 0.32 -1.0 804,764 - MPMX19_00785 0.32 -0.5 804,764 - MPMX19_00785 0.32 -2.4 804,764 - MPMX19_00785 0.32 -0.1 804,994 + MPMX19_00785 0.41 -1.1 804,994 + MPMX19_00785 0.41 +0.5 804,994 + MPMX19_00785 0.41 -0.6 804,994 + MPMX19_00785 0.41 -0.2 804,994 + MPMX19_00785 0.41 +1.0 804,994 + MPMX19_00785 0.41 -1.2 804,994 + MPMX19_00785 0.41 +0.2 804,994 + MPMX19_00785 0.41 +1.1 804,994 + MPMX19_00785 0.41 -2.4 804,994 + MPMX19_00785 0.41 +1.1 804,994 + MPMX19_00785 0.41 +0.8 804,994 + MPMX19_00785 0.41 -1.9 804,994 + MPMX19_00785 0.41 +0.6 804,994 + MPMX19_00785 0.41 -1.7 804,994 + MPMX19_00785 0.41 -1.6 804,994 + MPMX19_00785 0.41 +0.6 804,995 - MPMX19_00785 0.41 -0.0 804,995 - MPMX19_00785 0.41 -0.9 804,995 - MPMX19_00785 0.41 -1.4 804,995 - MPMX19_00785 0.41 -1.4 804,995 - MPMX19_00785 0.41 +0.6 804,995 - MPMX19_00785 0.41 -1.7 804,995 - MPMX19_00785 0.41 +1.5 804,995 - MPMX19_00785 0.41 +0.4 804,995 - MPMX19_00785 0.41 +0.4 804,995 - MPMX19_00785 0.41 +0.2 804,995 - MPMX19_00785 0.41 +0.5 804,995 - MPMX19_00785 0.41 -0.8 804,995 - MPMX19_00785 0.41 +2.3 804,995 - MPMX19_00785 0.41 +1.6 804,995 - MPMX19_00785 0.41 -0.7 804,995 - MPMX19_00785 0.41 +1.3 804,995 - MPMX19_00785 0.41 +1.0 805,243 + MPMX19_00785 0.51 +0.4 805,243 + MPMX19_00785 0.51 -2.0 805,243 + MPMX19_00785 0.51 -1.6 805,243 + MPMX19_00785 0.51 +0.2 805,243 + MPMX19_00785 0.51 -0.3 805,243 + MPMX19_00785 0.51 -2.7 805,244 - MPMX19_00785 0.51 -0.1 805,244 - MPMX19_00785 0.51 -1.6 805,244 - MPMX19_00785 0.51 -0.6 805,244 - MPMX19_00785 0.51 -0.7 805,244 - MPMX19_00785 0.51 -0.4 805,244 - MPMX19_00785 0.51 +0.0 805,244 - MPMX19_00785 0.51 +0.8 805,244 - MPMX19_00785 0.51 -0.0 805,244 - MPMX19_00785 0.51 +0.2 805,244 - MPMX19_00785 0.51 -1.0 805,244 - MPMX19_00785 0.51 +1.1 805,244 - MPMX19_00785 0.51 -1.1 805,244 - MPMX19_00785 0.51 -0.3 805,244 - MPMX19_00785 0.51 +0.8 805,244 - MPMX19_00785 0.51 +0.0 805,993 + MPMX19_00785 0.81 +1.0 805,993 + MPMX19_00785 0.81 +0.4 805,993 + MPMX19_00785 0.81 -1.6 805,993 + MPMX19_00785 0.81 -1.0 805,993 + MPMX19_00785 0.81 +0.5 805,994 - MPMX19_00785 0.81 -0.8 805,994 - MPMX19_00785 0.81 -0.5 805,994 - MPMX19_00785 0.81 +0.6 806,317 + -1.0 806,516 + -1.3 806,516 + +0.7 806,517 - +0.0 806,517 - +0.1 806,549 + -0.3 806,550 - +0.5 806,597 + -1.6 806,597 + -1.2 806,597 + -1.4 806,598 - -0.2 806,651 + +0.6 806,651 + -0.0 806,652 - +1.2 806,824 + +1.6 806,824 + -0.4 806,824 + -1.5 806,824 + -0.0 806,824 + +0.4 806,824 + -0.6 806,824 + -0.6 806,825 - -0.4 806,825 - -0.7 806,825 - +1.7 806,825 - +0.5 806,825 - -2.0 806,825 - +0.8 806,825 - -0.6 806,825 - -1.4 806,825 - +0.5 806,825 - +0.2 806,825 - -0.4 806,825 - -0.0 806,825 - +2.0 806,825 - -0.0 806,845 + +0.3 806,845 + -0.0 806,845 + +1.1 806,845 + +0.5 806,845 + +1.0 806,845 + +1.1 806,845 + -0.2 806,845 + -0.3 806,845 + -0.6 806,845 + -2.5 806,845 + +1.5 806,845 + -0.9 806,845 + -1.2 806,845 + +0.8 806,845 + -0.0 806,846 - +0.8 806,846 - -0.5 806,846 - -0.8 806,846 - -0.5 806,846 - -0.5 806,846 - +1.0 806,846 - +0.6 806,846 - -0.0 806,846 - -1.2 806,846 - +1.0 807,016 + MPMX19_00786 0.19 -1.4 807,165 + MPMX19_00786 0.28 +0.9 807,457 + MPMX19_00786 0.46 -0.5 807,457 + MPMX19_00786 0.46 -0.6 807,457 + MPMX19_00786 0.46 +2.5 807,457 + MPMX19_00786 0.46 +0.1 807,457 + MPMX19_00786 0.46 +1.4 807,457 + MPMX19_00786 0.46 -0.3
Or see this region's nucleotide sequence