Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00782

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00781 and MPMX19_00782 are separated by 166 nucleotidesMPMX19_00782 and MPMX19_00783 are separated by 22 nucleotidesMPMX19_00783 and MPMX19_00784 are separated by 19 nucleotides MPMX19_00781: MPMX19_00781 - hypothetical protein, at 800,174 to 801,046 _00781 MPMX19_00782: MPMX19_00782 - 3-dehydroquinate dehydratase, at 801,213 to 801,662 _00782 MPMX19_00783: MPMX19_00783 - Biotin carboxyl carrier protein of acetyl-CoA carboxylase, at 801,685 to 802,134 _00783 MPMX19_00784: MPMX19_00784 - Biotin carboxylase, at 802,154 to 803,494 _00784 Position (kb) 801 802Strain fitness (log2 ratio) -2 -1 0 1 2at 800.327 kb on + strand, within MPMX19_00781at 800.327 kb on + strand, within MPMX19_00781at 800.327 kb on + strand, within MPMX19_00781at 800.328 kb on - strand, within MPMX19_00781at 800.328 kb on - strand, within MPMX19_00781at 800.328 kb on - strand, within MPMX19_00781at 800.328 kb on - strand, within MPMX19_00781at 800.328 kb on - strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.360 kb on + strand, within MPMX19_00781at 800.361 kb on - strand, within MPMX19_00781at 800.361 kb on - strand, within MPMX19_00781at 800.361 kb on - strand, within MPMX19_00781at 800.361 kb on - strand, within MPMX19_00781at 800.361 kb on - strand, within MPMX19_00781at 800.361 kb on - strand, within MPMX19_00781at 800.361 kb on - strand, within MPMX19_00781at 800.361 kb on - strand, within MPMX19_00781at 800.361 kb on - strand, within MPMX19_00781at 800.361 kb on - strand, within MPMX19_00781at 800.361 kb on - strand, within MPMX19_00781at 800.369 kb on + strand, within MPMX19_00781at 800.369 kb on + strand, within MPMX19_00781at 800.369 kb on + strand, within MPMX19_00781at 800.369 kb on + strand, within MPMX19_00781at 800.369 kb on + strand, within MPMX19_00781at 800.370 kb on - strand, within MPMX19_00781at 800.370 kb on - strand, within MPMX19_00781at 800.447 kb on + strand, within MPMX19_00781at 800.447 kb on + strand, within MPMX19_00781at 800.448 kb on - strand, within MPMX19_00781at 800.480 kb on + strand, within MPMX19_00781at 800.480 kb on + strand, within MPMX19_00781at 800.481 kb on - strand, within MPMX19_00781at 800.481 kb on - strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.522 kb on + strand, within MPMX19_00781at 800.523 kb on - strand, within MPMX19_00781at 800.523 kb on - strand, within MPMX19_00781at 800.523 kb on - strand, within MPMX19_00781at 800.523 kb on - strand, within MPMX19_00781at 800.523 kb on - strand, within MPMX19_00781at 800.523 kb on - strand, within MPMX19_00781at 800.523 kb on - strand, within MPMX19_00781at 800.523 kb on - strand, within MPMX19_00781at 800.523 kb on - strand, within MPMX19_00781at 800.523 kb on - strand, within MPMX19_00781at 800.523 kb on - strand, within MPMX19_00781at 800.524 kb on + strand, within MPMX19_00781at 800.524 kb on + strand, within MPMX19_00781at 800.524 kb on + strand, within MPMX19_00781at 800.525 kb on - strand, within MPMX19_00781at 800.594 kb on + strand, within MPMX19_00781at 800.594 kb on + strand, within MPMX19_00781at 800.594 kb on + strand, within MPMX19_00781at 800.594 kb on + strand, within MPMX19_00781at 800.594 kb on + strand, within MPMX19_00781at 800.594 kb on + strand, within MPMX19_00781at 800.594 kb on + strand, within MPMX19_00781at 800.594 kb on + strand, within MPMX19_00781at 800.594 kb on + strand, within MPMX19_00781at 800.594 kb on + strand, within MPMX19_00781at 800.594 kb on + strand, within MPMX19_00781at 800.594 kb on + strand, within MPMX19_00781at 800.595 kb on - strand, within MPMX19_00781at 800.595 kb on - strand, within MPMX19_00781at 800.595 kb on - strand, within MPMX19_00781at 800.595 kb on - strand, within MPMX19_00781at 800.595 kb on - strand, within MPMX19_00781at 800.595 kb on - strand, within MPMX19_00781at 800.595 kb on - strand, within MPMX19_00781at 800.595 kb on - strand, within MPMX19_00781at 800.595 kb on - strand, within MPMX19_00781at 800.595 kb on - strand, within MPMX19_00781at 800.595 kb on - strand, within MPMX19_00781at 800.699 kb on + strand, within MPMX19_00781at 800.699 kb on + strand, within MPMX19_00781at 800.700 kb on - strand, within MPMX19_00781at 800.700 kb on - strand, within MPMX19_00781at 800.700 kb on - strand, within MPMX19_00781at 800.700 kb on - strand, within MPMX19_00781at 801.002 kb on + strandat 801.002 kb on + strandat 801.003 kb on - strandat 801.003 kb on - strandat 801.003 kb on - strandat 801.047 kb on + strandat 801.047 kb on + strandat 801.047 kb on + strandat 801.048 kb on - strandat 801.048 kb on - strandat 801.174 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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800,327 + MPMX19_00781 0.18 -0.9
800,327 + MPMX19_00781 0.18 -0.1
800,327 + MPMX19_00781 0.18 +0.6
800,328 - MPMX19_00781 0.18 +1.2
800,328 - MPMX19_00781 0.18 -0.8
800,328 - MPMX19_00781 0.18 +0.6
800,328 - MPMX19_00781 0.18 -0.4
800,328 - MPMX19_00781 0.18 -0.5
800,360 + MPMX19_00781 0.21 -0.5
800,360 + MPMX19_00781 0.21 -0.9
800,360 + MPMX19_00781 0.21 -1.5
800,360 + MPMX19_00781 0.21 -0.3
800,360 + MPMX19_00781 0.21 -0.3
800,360 + MPMX19_00781 0.21 -0.6
800,360 + MPMX19_00781 0.21 +0.6
800,360 + MPMX19_00781 0.21 -0.9
800,360 + MPMX19_00781 0.21 -0.4
800,360 + MPMX19_00781 0.21 -0.5
800,360 + MPMX19_00781 0.21 -0.1
800,360 + MPMX19_00781 0.21 -1.8
800,360 + MPMX19_00781 0.21 -1.2
800,360 + MPMX19_00781 0.21 -1.7
800,361 - MPMX19_00781 0.21 -0.2
800,361 - MPMX19_00781 0.21 -1.0
800,361 - MPMX19_00781 0.21 -1.0
800,361 - MPMX19_00781 0.21 -0.3
800,361 - MPMX19_00781 0.21 -0.9
800,361 - MPMX19_00781 0.21 +0.2
800,361 - MPMX19_00781 0.21 +0.0
800,361 - MPMX19_00781 0.21 -0.9
800,361 - MPMX19_00781 0.21 -0.4
800,361 - MPMX19_00781 0.21 -0.8
800,361 - MPMX19_00781 0.21 -0.7
800,369 + MPMX19_00781 0.22 -0.3
800,369 + MPMX19_00781 0.22 -0.2
800,369 + MPMX19_00781 0.22 -0.4
800,369 + MPMX19_00781 0.22 -0.1
800,369 + MPMX19_00781 0.22 -1.4
800,370 - MPMX19_00781 0.22 -0.6
800,370 - MPMX19_00781 0.22 +0.6
800,447 + MPMX19_00781 0.31 +0.6
800,447 + MPMX19_00781 0.31 -0.0
800,448 - MPMX19_00781 0.31 -1.9
800,480 + MPMX19_00781 0.35 -1.2
800,480 + MPMX19_00781 0.35 -0.2
800,481 - MPMX19_00781 0.35 -1.5
800,481 - MPMX19_00781 0.35 +1.6
800,522 + MPMX19_00781 0.40 -0.5
800,522 + MPMX19_00781 0.40 +0.3
800,522 + MPMX19_00781 0.40 +1.0
800,522 + MPMX19_00781 0.40 -0.8
800,522 + MPMX19_00781 0.40 +0.0
800,522 + MPMX19_00781 0.40 -0.4
800,522 + MPMX19_00781 0.40 +0.8
800,522 + MPMX19_00781 0.40 +0.6
800,522 + MPMX19_00781 0.40 -0.7
800,522 + MPMX19_00781 0.40 -1.1
800,522 + MPMX19_00781 0.40 -0.0
800,522 + MPMX19_00781 0.40 -0.6
800,522 + MPMX19_00781 0.40 -0.5
800,522 + MPMX19_00781 0.40 -0.4
800,523 - MPMX19_00781 0.40 -0.2
800,523 - MPMX19_00781 0.40 +0.3
800,523 - MPMX19_00781 0.40 -0.7
800,523 - MPMX19_00781 0.40 -1.0
800,523 - MPMX19_00781 0.40 +0.7
800,523 - MPMX19_00781 0.40 -1.3
800,523 - MPMX19_00781 0.40 -0.4
800,523 - MPMX19_00781 0.40 -0.3
800,523 - MPMX19_00781 0.40 -0.4
800,523 - MPMX19_00781 0.40 -0.1
800,523 - MPMX19_00781 0.40 -0.9
800,524 + MPMX19_00781 0.40 +1.0
800,524 + MPMX19_00781 0.40 -2.4
800,524 + MPMX19_00781 0.40 +0.2
800,525 - MPMX19_00781 0.40 +0.4
800,594 + MPMX19_00781 0.48 -1.0
800,594 + MPMX19_00781 0.48 -0.1
800,594 + MPMX19_00781 0.48 -0.4
800,594 + MPMX19_00781 0.48 -0.4
800,594 + MPMX19_00781 0.48 -0.0
800,594 + MPMX19_00781 0.48 -1.2
800,594 + MPMX19_00781 0.48 -1.7
800,594 + MPMX19_00781 0.48 -1.0
800,594 + MPMX19_00781 0.48 -0.5
800,594 + MPMX19_00781 0.48 -0.8
800,594 + MPMX19_00781 0.48 -0.4
800,594 + MPMX19_00781 0.48 -1.0
800,595 - MPMX19_00781 0.48 -1.6
800,595 - MPMX19_00781 0.48 +1.0
800,595 - MPMX19_00781 0.48 +1.1
800,595 - MPMX19_00781 0.48 -1.5
800,595 - MPMX19_00781 0.48 -0.6
800,595 - MPMX19_00781 0.48 -0.2
800,595 - MPMX19_00781 0.48 +0.4
800,595 - MPMX19_00781 0.48 -0.2
800,595 - MPMX19_00781 0.48 +2.3
800,595 - MPMX19_00781 0.48 -0.3
800,595 - MPMX19_00781 0.48 -0.7
800,699 + MPMX19_00781 0.60 -0.5
800,699 + MPMX19_00781 0.60 -0.0
800,700 - MPMX19_00781 0.60 +0.2
800,700 - MPMX19_00781 0.60 +0.2
800,700 - MPMX19_00781 0.60 -0.8
800,700 - MPMX19_00781 0.60 -0.7
801,002 + +0.3
801,002 + -0.7
801,003 - -0.4
801,003 - +0.4
801,003 - -0.5
801,047 + -0.6
801,047 + +0.6
801,047 + +0.2
801,048 - -0.4
801,048 - +0.1
801,174 + +1.1

Or see this region's nucleotide sequence