Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00763 and MPMX19_00764 are separated by 261 nucleotides MPMX19_00764 and MPMX19_00765 overlap by 1 nucleotides MPMX19_00765 and MPMX19_00766 are separated by 81 nucleotides MPMX19_00766 and MPMX19_00767 are separated by 168 nucleotides
MPMX19_00763: MPMX19_00763 - hypothetical protein, at 779,412 to 781,043
_00763
MPMX19_00764: MPMX19_00764 - ECF RNA polymerase sigma factor EcfG, at 781,305 to 781,814
_00764
MPMX19_00765: MPMX19_00765 - hypothetical protein, at 781,814 to 782,770
_00765
MPMX19_00766: MPMX19_00766 - hypothetical protein, at 782,852 to 783,496
_00766
MPMX19_00767: MPMX19_00767 - hypothetical protein, at 783,665 to 784,492
_00767
Position (kb)
781
782
783 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 780.925 kb on - strand at 780.943 kb on - strand at 780.943 kb on - strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.123 kb on + strand at 781.123 kb on + strand at 781.124 kb on - strand at 781.124 kb on - strand at 781.124 kb on - strand at 781.124 kb on - strand at 781.124 kb on - strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.288 kb on - strand at 781.686 kb on + strand, within MPMX19_00764 at 781.686 kb on + strand, within MPMX19_00764 at 781.686 kb on + strand, within MPMX19_00764 at 781.687 kb on - strand, within MPMX19_00764 at 781.687 kb on - strand, within MPMX19_00764 at 781.687 kb on - strand, within MPMX19_00764 at 781.687 kb on - strand, within MPMX19_00764 at 781.793 kb on + strand at 782.836 kb on + strand at 782.836 kb on + strand at 782.836 kb on + strand at 782.836 kb on + strand at 782.836 kb on + strand at 782.836 kb on + strand at 782.837 kb on - strand at 782.837 kb on - strand at 782.837 kb on - strand at 782.837 kb on - strand at 782.837 kb on - strand at 782.853 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 783.076 kb on - strand, within MPMX19_00766 at 783.318 kb on + strand, within MPMX19_00766 at 783.399 kb on + strand, within MPMX19_00766 at 783.399 kb on + strand, within MPMX19_00766 at 783.399 kb on + strand, within MPMX19_00766 at 783.400 kb on - strand, within MPMX19_00766 at 783.400 kb on - strand, within MPMX19_00766 at 783.560 kb on + strand at 783.560 kb on + strand at 783.560 kb on + strand at 783.560 kb on + strand at 783.560 kb on + strand at 783.560 kb on + strand at 783.560 kb on + strand at 783.561 kb on - strand at 783.561 kb on - strand at 783.561 kb on - strand at 783.561 kb on - strand at 783.572 kb on + strand at 783.572 kb on + strand at 783.572 kb on + strand at 783.572 kb on + strand at 783.572 kb on + strand at 783.572 kb on + strand at 783.572 kb on + strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.634 kb on + strand at 783.634 kb on + strand at 783.634 kb on + strand at 783.635 kb on - strand at 783.635 kb on - strand at 783.635 kb on - strand at 783.635 kb on - strand at 783.635 kb on - strand at 783.635 kb on - strand at 783.635 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 780,925 - -0.5 780,943 - -1.0 780,943 - -0.8 781,111 + +0.4 781,111 + -2.0 781,111 + -0.3 781,111 + +0.3 781,111 + -1.8 781,111 + +0.0 781,111 + -1.1 781,112 - +0.9 781,112 - -1.2 781,112 - +1.0 781,112 - -1.8 781,112 - -1.5 781,112 - -2.8 781,112 - -0.8 781,123 + -0.0 781,123 + +0.1 781,124 - -2.7 781,124 - -1.5 781,124 - -0.8 781,124 - -0.2 781,124 - +1.0 781,153 + -2.0 781,153 + +0.2 781,153 + -2.0 781,153 + +1.0 781,153 + +1.2 781,153 + -0.8 781,153 + +0.7 781,154 - -0.5 781,154 - +1.3 781,154 - -1.6 781,154 - +2.0 781,154 - -0.0 781,154 - -1.0 781,154 - -0.8 781,154 - +0.3 781,154 - -1.0 781,154 - -0.8 781,154 - -0.7 781,288 - +0.4 781,686 + MPMX19_00764 0.75 -1.5 781,686 + MPMX19_00764 0.75 -0.6 781,686 + MPMX19_00764 0.75 -0.2 781,687 - MPMX19_00764 0.75 -1.0 781,687 - MPMX19_00764 0.75 -1.6 781,687 - MPMX19_00764 0.75 +0.1 781,687 - MPMX19_00764 0.75 -0.6 781,793 + -0.4 782,836 + +1.2 782,836 + +0.0 782,836 + -1.5 782,836 + -0.2 782,836 + +1.1 782,836 + -0.8 782,837 - -1.2 782,837 - -1.0 782,837 - +0.6 782,837 - -0.0 782,837 - -0.2 782,853 + -0.6 782,868 + +1.0 782,868 + -0.2 782,868 + -0.4 782,868 + -0.7 782,868 + -0.8 782,868 + +0.8 782,868 + +0.3 782,868 + +0.2 782,868 + -1.0 782,868 + +0.5 782,868 + +0.1 782,868 + -0.8 782,869 - +0.2 782,869 - +0.1 782,869 - -1.5 782,869 - +0.5 782,869 - -0.3 782,869 - -0.5 782,869 - -1.3 782,869 - -0.0 782,869 - -1.0 782,869 - -0.5 782,869 - -0.7 783,076 - MPMX19_00766 0.35 +0.2 783,318 + MPMX19_00766 0.72 -0.0 783,399 + MPMX19_00766 0.85 -0.8 783,399 + MPMX19_00766 0.85 -1.7 783,399 + MPMX19_00766 0.85 -0.2 783,400 - MPMX19_00766 0.85 -1.5 783,400 - MPMX19_00766 0.85 -1.5 783,560 + +0.5 783,560 + +1.7 783,560 + -0.5 783,560 + -1.2 783,560 + +0.2 783,560 + -0.1 783,560 + +0.7 783,561 - +0.1 783,561 - +0.6 783,561 - +0.2 783,561 - -1.2 783,572 + -0.8 783,572 + +1.0 783,572 + -0.2 783,572 + -1.2 783,572 + +0.8 783,572 + +0.8 783,572 + -1.6 783,573 - -0.8 783,573 - -0.1 783,573 - +0.5 783,573 - -0.0 783,573 - -0.8 783,573 - -0.2 783,573 - -0.6 783,573 - -1.5 783,573 - -2.1 783,573 - -1.9 783,584 + -0.4 783,584 + -0.5 783,584 + +0.1 783,584 + +1.7 783,584 + -0.5 783,584 + +1.0 783,584 + +0.0 783,584 + +0.5 783,584 + -0.6 783,584 + +0.0 783,584 + -0.3 783,585 - -0.8 783,585 - +0.1 783,585 - -1.2 783,585 - +0.2 783,585 - +0.9 783,585 - +0.8 783,585 - +0.3 783,585 - -0.9 783,585 - -1.7 783,634 + -0.5 783,634 + +0.4 783,634 + +0.0 783,635 - -1.3 783,635 - +0.1 783,635 - -0.3 783,635 - -0.2 783,635 - +0.5 783,635 - -0.8 783,635 - -0.2
Or see this region's nucleotide sequence