Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00716 and MPMX19_00717 are separated by 209 nucleotides MPMX19_00717 and MPMX19_00718 are separated by 41 nucleotides
MPMX19_00716: MPMX19_00716 - Hydrogenase maturation factor HypD, at 739,157 to 740,269
_00716
MPMX19_00717: MPMX19_00717 - hypothetical protein, at 740,479 to 741,300
_00717
MPMX19_00718: MPMX19_00718 - hypothetical protein, at 741,342 to 743,027
_00718
Position (kb) 740
741
742 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 739.781 kb on + strand, within MPMX19_00716 at 739.781 kb on + strand, within MPMX19_00716 at 739.781 kb on + strand, within MPMX19_00716 at 739.781 kb on + strand, within MPMX19_00716 at 739.782 kb on - strand, within MPMX19_00716 at 739.782 kb on - strand, within MPMX19_00716 at 739.782 kb on - strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.045 kb on + strand, within MPMX19_00716 at 740.046 kb on - strand, within MPMX19_00716 at 740.046 kb on - strand, within MPMX19_00716 at 740.046 kb on - strand, within MPMX19_00716 at 740.046 kb on - strand, within MPMX19_00716 at 740.046 kb on - strand, within MPMX19_00716 at 740.240 kb on + strand at 740.240 kb on + strand at 740.240 kb on + strand at 740.240 kb on + strand at 740.240 kb on + strand at 740.240 kb on + strand at 740.240 kb on + strand at 740.240 kb on + strand at 740.240 kb on + strand at 740.240 kb on + strand at 740.240 kb on + strand at 740.240 kb on + strand at 740.240 kb on + strand at 740.240 kb on + strand at 740.241 kb on - strand at 740.241 kb on - strand at 740.241 kb on - strand at 740.241 kb on - strand at 740.241 kb on - strand at 740.241 kb on - strand at 740.241 kb on - strand at 740.241 kb on - strand at 740.241 kb on - strand at 740.241 kb on - strand at 740.241 kb on - strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.246 kb on + strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.247 kb on - strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.446 kb on + strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.447 kb on - strand at 740.464 kb on - strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.485 kb on + strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.486 kb on - strand at 740.743 kb on + strand, within MPMX19_00717 at 740.743 kb on + strand, within MPMX19_00717 at 740.743 kb on + strand, within MPMX19_00717 at 740.743 kb on + strand, within MPMX19_00717 at 740.744 kb on - strand, within MPMX19_00717 at 740.744 kb on - strand, within MPMX19_00717 at 740.744 kb on - strand, within MPMX19_00717 at 740.744 kb on - strand, within MPMX19_00717 at 740.744 kb on - strand, within MPMX19_00717 at 740.744 kb on - strand, within MPMX19_00717 at 740.809 kb on + strand, within MPMX19_00717 at 740.809 kb on + strand, within MPMX19_00717 at 740.809 kb on + strand, within MPMX19_00717 at 740.809 kb on + strand, within MPMX19_00717 at 740.809 kb on + strand, within MPMX19_00717 at 740.809 kb on + strand, within MPMX19_00717 at 740.809 kb on + strand, within MPMX19_00717 at 740.809 kb on + strand, within MPMX19_00717 at 740.809 kb on + strand, within MPMX19_00717 at 740.809 kb on + strand, within MPMX19_00717 at 740.810 kb on - strand, within MPMX19_00717 at 740.810 kb on - strand, within MPMX19_00717 at 740.810 kb on - strand, within MPMX19_00717 at 740.810 kb on - strand, within MPMX19_00717 at 740.899 kb on + strand, within MPMX19_00717 at 740.899 kb on + strand, within MPMX19_00717 at 740.900 kb on - strand, within MPMX19_00717 at 740.900 kb on - strand, within MPMX19_00717 at 740.900 kb on - strand, within MPMX19_00717 at 741.217 kb on + strand, within MPMX19_00717 at 741.217 kb on + strand, within MPMX19_00717 at 741.217 kb on + strand, within MPMX19_00717 at 741.217 kb on + strand, within MPMX19_00717 at 741.218 kb on - strand at 741.218 kb on - strand at 741.218 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 739,781 + MPMX19_00716 0.56 -0.9 739,781 + MPMX19_00716 0.56 -0.6 739,781 + MPMX19_00716 0.56 -0.5 739,781 + MPMX19_00716 0.56 +0.2 739,782 - MPMX19_00716 0.56 -0.0 739,782 - MPMX19_00716 0.56 +1.2 739,782 - MPMX19_00716 0.56 +0.4 740,045 + MPMX19_00716 0.80 -1.6 740,045 + MPMX19_00716 0.80 +0.7 740,045 + MPMX19_00716 0.80 -1.2 740,045 + MPMX19_00716 0.80 +0.2 740,045 + MPMX19_00716 0.80 -0.4 740,045 + MPMX19_00716 0.80 -1.4 740,045 + MPMX19_00716 0.80 +0.1 740,046 - MPMX19_00716 0.80 -0.4 740,046 - MPMX19_00716 0.80 -1.6 740,046 - MPMX19_00716 0.80 -1.5 740,046 - MPMX19_00716 0.80 +0.4 740,046 - MPMX19_00716 0.80 -0.0 740,240 + -0.3 740,240 + -0.1 740,240 + -0.5 740,240 + +0.2 740,240 + -0.3 740,240 + +1.0 740,240 + +0.2 740,240 + -0.6 740,240 + +0.2 740,240 + -2.2 740,240 + -0.4 740,240 + -0.0 740,240 + -1.4 740,240 + -1.0 740,241 - -0.0 740,241 - +1.4 740,241 - -1.2 740,241 - -0.0 740,241 - -0.1 740,241 - -1.7 740,241 - -2.0 740,241 - -1.5 740,241 - -2.4 740,241 - +0.3 740,241 - -0.6 740,246 + +0.6 740,246 + +0.3 740,246 + +0.6 740,246 + +0.6 740,246 + -0.3 740,246 + +0.2 740,246 + -1.5 740,246 + +1.8 740,246 + -2.4 740,246 + -2.4 740,246 + -2.0 740,246 + -0.3 740,246 + -0.1 740,246 + -1.6 740,246 + -0.4 740,246 + -1.9 740,246 + +0.4 740,246 + +0.2 740,246 + +0.8 740,246 + -0.5 740,246 + -1.4 740,246 + -1.4 740,246 + -0.3 740,246 + +0.2 740,246 + -0.1 740,246 + -1.7 740,246 + -0.0 740,246 + -1.8 740,246 + -1.9 740,246 + -0.2 740,246 + -0.0 740,246 + +0.6 740,246 + -0.7 740,246 + -1.6 740,246 + -0.7 740,246 + +0.3 740,246 + -0.5 740,246 + +0.0 740,247 - -0.6 740,247 - -1.4 740,247 - -0.1 740,247 - +0.6 740,247 - -1.2 740,247 - -0.1 740,247 - -0.6 740,247 - -1.5 740,247 - -0.4 740,247 - -0.1 740,247 - -1.2 740,247 - +0.2 740,247 - +0.2 740,247 - -0.7 740,247 - -1.0 740,247 - -0.0 740,247 - -0.5 740,247 - +0.4 740,247 - +0.8 740,247 - -1.6 740,247 - -0.8 740,247 - +0.5 740,247 - +1.6 740,247 - +2.6 740,247 - -0.6 740,247 - -1.1 740,247 - +0.4 740,247 - +0.6 740,247 - -0.4 740,247 - -1.8 740,247 - -1.0 740,247 - +0.6 740,247 - -0.3 740,446 + +1.2 740,446 + -1.0 740,446 + -0.4 740,446 + -1.9 740,446 + -0.0 740,446 + -0.4 740,446 + +1.1 740,446 + -0.8 740,446 + +1.3 740,446 + +0.8 740,446 + -1.5 740,446 + -0.7 740,446 + -0.7 740,446 + -0.8 740,446 + +0.1 740,447 - -1.2 740,447 - -1.4 740,447 - -0.8 740,447 - -0.6 740,447 - -0.2 740,447 - -0.0 740,447 - -1.0 740,447 - -1.0 740,447 - -0.3 740,447 - -0.2 740,447 - -3.1 740,447 - +0.0 740,447 - -1.0 740,447 - -0.4 740,447 - +1.2 740,447 - +0.5 740,447 - +1.2 740,447 - -0.0 740,447 - +2.0 740,464 - +0.2 740,485 + +0.4 740,485 + -1.0 740,485 + -1.4 740,485 + +0.2 740,485 + -0.2 740,485 + -0.0 740,485 + +0.9 740,485 + -1.9 740,485 + -0.4 740,485 + -1.7 740,485 + -1.5 740,485 + +0.0 740,485 + +0.4 740,485 + +0.7 740,486 - +2.0 740,486 - -0.6 740,486 - -0.2 740,486 - -0.3 740,486 - -1.7 740,486 - +0.6 740,486 - -0.7 740,486 - +1.0 740,486 - +0.1 740,486 - +1.5 740,486 - -1.0 740,486 - +0.2 740,486 - +1.4 740,486 - -0.3 740,486 - -0.8 740,743 + MPMX19_00717 0.32 +0.7 740,743 + MPMX19_00717 0.32 -1.0 740,743 + MPMX19_00717 0.32 -0.0 740,743 + MPMX19_00717 0.32 -0.2 740,744 - MPMX19_00717 0.32 +0.6 740,744 - MPMX19_00717 0.32 -0.4 740,744 - MPMX19_00717 0.32 +0.8 740,744 - MPMX19_00717 0.32 -0.9 740,744 - MPMX19_00717 0.32 -0.0 740,744 - MPMX19_00717 0.32 +1.0 740,809 + MPMX19_00717 0.40 +0.8 740,809 + MPMX19_00717 0.40 -0.6 740,809 + MPMX19_00717 0.40 -0.4 740,809 + MPMX19_00717 0.40 -1.2 740,809 + MPMX19_00717 0.40 -0.0 740,809 + MPMX19_00717 0.40 -0.6 740,809 + MPMX19_00717 0.40 +0.2 740,809 + MPMX19_00717 0.40 +0.4 740,809 + MPMX19_00717 0.40 +1.0 740,809 + MPMX19_00717 0.40 -0.8 740,810 - MPMX19_00717 0.40 -0.4 740,810 - MPMX19_00717 0.40 +1.6 740,810 - MPMX19_00717 0.40 +0.2 740,810 - MPMX19_00717 0.40 +1.0 740,899 + MPMX19_00717 0.51 -0.1 740,899 + MPMX19_00717 0.51 +0.4 740,900 - MPMX19_00717 0.51 -2.1 740,900 - MPMX19_00717 0.51 +1.6 740,900 - MPMX19_00717 0.51 -0.9 741,217 + MPMX19_00717 0.90 -0.7 741,217 + MPMX19_00717 0.90 +1.2 741,217 + MPMX19_00717 0.90 -1.2 741,217 + MPMX19_00717 0.90 -1.7 741,218 - -0.6 741,218 - -0.5 741,218 - +0.3
Or see this region's nucleotide sequence