Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00663 and MPMX19_00664 are separated by 44 nucleotides MPMX19_00664 and MPMX19_00665 are separated by 130 nucleotides MPMX19_00665 and MPMX19_00666 are separated by 10 nucleotides
MPMX19_00663: MPMX19_00663 - hypothetical protein, at 686,891 to 687,526
_00663
MPMX19_00664: MPMX19_00664 - hypothetical protein, at 687,571 to 687,858
_00664
MPMX19_00665: MPMX19_00665 - hypothetical protein, at 687,989 to 688,423
_00665
MPMX19_00666: MPMX19_00666 - hypothetical protein, at 688,434 to 688,844
_00666
Position (kb)
686
687
688 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 685.929 kb on + strand at 685.930 kb on - strand at 685.966 kb on + strand at 685.966 kb on + strand at 686.062 kb on - strand at 686.082 kb on + strand at 686.082 kb on + strand at 686.083 kb on - strand at 686.135 kb on - strand at 686.152 kb on + strand at 686.153 kb on - strand at 686.287 kb on - strand at 686.307 kb on + strand at 686.307 kb on + strand at 686.307 kb on + strand at 686.307 kb on + strand at 686.307 kb on + strand at 686.307 kb on + strand at 686.307 kb on + strand at 686.307 kb on + strand at 686.308 kb on - strand at 686.308 kb on - strand at 686.308 kb on - strand at 686.308 kb on - strand at 686.308 kb on - strand at 686.308 kb on - strand at 686.308 kb on - strand at 686.308 kb on - strand at 686.308 kb on - strand at 686.309 kb on + strand at 686.309 kb on + strand at 686.309 kb on + strand at 686.309 kb on + strand at 686.309 kb on + strand at 686.309 kb on + strand at 686.309 kb on + strand at 686.309 kb on + strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.310 kb on - strand at 686.350 kb on + strand at 686.351 kb on - strand at 686.351 kb on - strand at 686.593 kb on + strand at 686.594 kb on - strand at 686.594 kb on - strand at 686.610 kb on + strand at 686.610 kb on + strand at 686.610 kb on + strand at 686.611 kb on - strand at 686.611 kb on - strand at 686.611 kb on - strand at 686.611 kb on - strand at 686.611 kb on - strand at 686.611 kb on - strand at 686.640 kb on - strand at 686.640 kb on - strand at 686.655 kb on + strand at 686.655 kb on + strand at 686.656 kb on - strand at 686.735 kb on - strand at 686.737 kb on + strand at 686.738 kb on - strand at 686.745 kb on - strand at 686.775 kb on + strand at 686.919 kb on + strand at 686.927 kb on - strand at 686.982 kb on - strand, within MPMX19_00663 at 686.982 kb on - strand, within MPMX19_00663 at 686.982 kb on - strand, within MPMX19_00663 at 687.055 kb on - strand, within MPMX19_00663 at 687.059 kb on + strand, within MPMX19_00663 at 687.060 kb on - strand, within MPMX19_00663 at 687.060 kb on - strand, within MPMX19_00663 at 687.244 kb on + strand, within MPMX19_00663 at 687.250 kb on + strand, within MPMX19_00663 at 687.437 kb on + strand, within MPMX19_00663 at 687.542 kb on + strand at 687.576 kb on - strand at 687.632 kb on + strand, within MPMX19_00664 at 687.633 kb on - strand, within MPMX19_00664 at 687.794 kb on + strand, within MPMX19_00664 at 687.794 kb on + strand, within MPMX19_00664 at 687.798 kb on + strand, within MPMX19_00664 at 687.798 kb on + strand, within MPMX19_00664 at 687.798 kb on + strand, within MPMX19_00664 at 687.827 kb on - strand, within MPMX19_00664 at 687.843 kb on + strand at 687.880 kb on - strand at 688.004 kb on + strand at 688.008 kb on + strand at 688.011 kb on - strand at 688.011 kb on - strand at 688.011 kb on - strand at 688.011 kb on - strand at 688.050 kb on + strand, within MPMX19_00665 at 688.055 kb on + strand, within MPMX19_00665 at 688.055 kb on + strand, within MPMX19_00665 at 688.056 kb on - strand, within MPMX19_00665 at 688.077 kb on - strand, within MPMX19_00665 at 688.179 kb on - strand, within MPMX19_00665 at 688.237 kb on - strand, within MPMX19_00665 at 688.237 kb on - strand, within MPMX19_00665 at 688.426 kb on + strand at 688.427 kb on - strand at 688.427 kb on - strand at 688.445 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 685,929 + -1.9 685,930 - +1.1 685,966 + -0.8 685,966 + +0.5 686,062 - -0.3 686,082 + -1.2 686,082 + -1.6 686,083 - +0.3 686,135 - -1.5 686,152 + -2.4 686,153 - +0.4 686,287 - +0.8 686,307 + -0.7 686,307 + -1.0 686,307 + -1.2 686,307 + +0.0 686,307 + +0.5 686,307 + +0.2 686,307 + +1.0 686,307 + -2.0 686,308 - -0.4 686,308 - -0.2 686,308 - -0.1 686,308 - -0.6 686,308 - -1.0 686,308 - +3.6 686,308 - +0.0 686,308 - -0.0 686,308 - -0.2 686,309 + +0.6 686,309 + -0.5 686,309 + -2.1 686,309 + +0.8 686,309 + -1.2 686,309 + -0.8 686,309 + -1.6 686,309 + +0.7 686,310 - -0.2 686,310 - +0.7 686,310 - -0.8 686,310 - -0.3 686,310 - -0.5 686,310 - +1.1 686,310 - +1.0 686,310 - -1.7 686,310 - -0.1 686,310 - +1.4 686,310 - -0.1 686,310 - -0.4 686,310 - -0.4 686,310 - +0.5 686,310 - -2.1 686,310 - -1.9 686,350 + -1.0 686,351 - -0.1 686,351 - +0.4 686,593 + +1.0 686,594 - -1.0 686,594 - +0.1 686,610 + +1.4 686,610 + -0.6 686,610 + -1.1 686,611 - -0.6 686,611 - -0.2 686,611 - +0.5 686,611 - -0.6 686,611 - -0.4 686,611 - +1.0 686,640 - -1.4 686,640 - +1.3 686,655 + -1.4 686,655 + -1.5 686,656 - -0.0 686,735 - -2.1 686,737 + -1.4 686,738 - -0.8 686,745 - -1.0 686,775 + -0.0 686,919 + -0.6 686,927 - -0.8 686,982 - MPMX19_00663 0.14 +0.6 686,982 - MPMX19_00663 0.14 +1.9 686,982 - MPMX19_00663 0.14 -1.5 687,055 - MPMX19_00663 0.26 -0.2 687,059 + MPMX19_00663 0.26 +0.3 687,060 - MPMX19_00663 0.27 -0.7 687,060 - MPMX19_00663 0.27 +0.1 687,244 + MPMX19_00663 0.56 -3.4 687,250 + MPMX19_00663 0.56 -1.9 687,437 + MPMX19_00663 0.86 +0.8 687,542 + -1.8 687,576 - -1.1 687,632 + MPMX19_00664 0.21 -0.4 687,633 - MPMX19_00664 0.22 +0.6 687,794 + MPMX19_00664 0.77 -1.3 687,794 + MPMX19_00664 0.77 -0.8 687,798 + MPMX19_00664 0.79 -0.7 687,798 + MPMX19_00664 0.79 +1.1 687,798 + MPMX19_00664 0.79 -1.6 687,827 - MPMX19_00664 0.89 +0.5 687,843 + +0.4 687,880 - +0.6 688,004 + -2.2 688,008 + -1.3 688,011 - -1.5 688,011 - -0.0 688,011 - -1.2 688,011 - -1.2 688,050 + MPMX19_00665 0.14 -1.0 688,055 + MPMX19_00665 0.15 -0.9 688,055 + MPMX19_00665 0.15 -1.2 688,056 - MPMX19_00665 0.15 -0.1 688,077 - MPMX19_00665 0.20 +0.7 688,179 - MPMX19_00665 0.44 +0.1 688,237 - MPMX19_00665 0.57 +0.6 688,237 - MPMX19_00665 0.57 -0.4 688,426 + -1.2 688,427 - +0.2 688,427 - -1.1 688,445 - -0.4
Or see this region's nucleotide sequence