Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00657

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00656 and MPMX19_00657 are separated by 122 nucleotidesMPMX19_00657 and MPMX19_00658 overlap by 4 nucleotides MPMX19_00656: MPMX19_00656 - Sensor histidine kinase RcsC, at 675,744 to 677,462 _00656 MPMX19_00657: MPMX19_00657 - Response regulator protein TmoT, at 677,585 to 678,181 _00657 MPMX19_00658: MPMX19_00658 - Adaptive-response sensory-kinase SasA, at 678,178 to 680,277 _00658 Position (kb) 677 678 679Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 676.780 kb on + strand, within MPMX19_00656at 676.780 kb on + strand, within MPMX19_00656at 676.780 kb on + strand, within MPMX19_00656at 676.780 kb on + strand, within MPMX19_00656at 676.780 kb on + strand, within MPMX19_00656at 676.780 kb on + strand, within MPMX19_00656at 676.780 kb on + strand, within MPMX19_00656at 676.780 kb on + strand, within MPMX19_00656at 676.780 kb on + strand, within MPMX19_00656at 676.781 kb on - strand, within MPMX19_00656at 676.781 kb on - strand, within MPMX19_00656at 676.781 kb on - strand, within MPMX19_00656at 676.781 kb on - strand, within MPMX19_00656at 676.781 kb on - strand, within MPMX19_00656at 676.781 kb on - strand, within MPMX19_00656at 676.781 kb on - strand, within MPMX19_00656at 676.781 kb on - strand, within MPMX19_00656at 676.781 kb on - strand, within MPMX19_00656at 676.781 kb on - strand, within MPMX19_00656at 676.781 kb on - strand, within MPMX19_00656at 676.781 kb on - strand, within MPMX19_00656at 676.798 kb on + strand, within MPMX19_00656at 676.798 kb on + strand, within MPMX19_00656at 676.798 kb on + strand, within MPMX19_00656at 676.798 kb on + strand, within MPMX19_00656at 676.798 kb on + strand, within MPMX19_00656at 676.798 kb on + strand, within MPMX19_00656at 676.799 kb on - strand, within MPMX19_00656at 676.799 kb on - strand, within MPMX19_00656at 676.799 kb on - strand, within MPMX19_00656at 676.799 kb on - strand, within MPMX19_00656at 676.799 kb on - strand, within MPMX19_00656at 676.799 kb on - strand, within MPMX19_00656at 676.933 kb on + strand, within MPMX19_00656at 676.933 kb on + strand, within MPMX19_00656at 676.933 kb on + strand, within MPMX19_00656at 676.933 kb on + strand, within MPMX19_00656at 676.933 kb on + strand, within MPMX19_00656at 676.933 kb on + strand, within MPMX19_00656at 676.934 kb on - strand, within MPMX19_00656at 676.934 kb on - strand, within MPMX19_00656at 676.934 kb on - strand, within MPMX19_00656at 676.934 kb on - strand, within MPMX19_00656at 676.934 kb on - strand, within MPMX19_00656at 676.934 kb on - strand, within MPMX19_00656at 676.934 kb on - strand, within MPMX19_00656at 676.934 kb on - strand, within MPMX19_00656at 677.119 kb on + strand, within MPMX19_00656at 677.120 kb on - strand, within MPMX19_00656at 677.120 kb on - strand, within MPMX19_00656at 677.215 kb on + strand, within MPMX19_00656at 677.216 kb on - strand, within MPMX19_00656at 677.216 kb on - strand, within MPMX19_00656at 677.216 kb on - strand, within MPMX19_00656at 677.216 kb on - strand, within MPMX19_00656at 677.216 kb on - strand, within MPMX19_00656at 677.449 kb on - strandat 677.449 kb on - strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.515 kb on + strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.516 kb on - strandat 677.518 kb on + strandat 677.518 kb on + strandat 677.518 kb on + strandat 677.518 kb on + strandat 677.518 kb on + strandat 677.519 kb on - strandat 677.519 kb on - strandat 677.519 kb on - strandat 677.519 kb on - strandat 677.519 kb on - strandat 677.553 kb on + strandat 677.553 kb on + strandat 677.553 kb on + strandat 677.553 kb on + strandat 677.553 kb on + strandat 677.553 kb on + strandat 677.553 kb on + strandat 677.554 kb on - strandat 677.554 kb on - strandat 677.554 kb on - strandat 677.554 kb on - strandat 677.554 kb on - strandat 677.554 kb on - strandat 677.954 kb on + strand, within MPMX19_00657at 677.954 kb on + strand, within MPMX19_00657at 677.954 kb on + strand, within MPMX19_00657at 678.224 kb on + strandat 678.224 kb on + strandat 678.224 kb on + strandat 678.225 kb on - strandat 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.408 kb on + strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.409 kb on - strand, within MPMX19_00658at 678.941 kb on + strand, within MPMX19_00658at 678.941 kb on + strand, within MPMX19_00658at 678.941 kb on + strand, within MPMX19_00658at 678.941 kb on + strand, within MPMX19_00658at 678.941 kb on + strand, within MPMX19_00658at 678.941 kb on + strand, within MPMX19_00658at 678.941 kb on + strand, within MPMX19_00658at 678.941 kb on + strand, within MPMX19_00658at 678.941 kb on + strand, within MPMX19_00658at 678.941 kb on + strand, within MPMX19_00658at 678.941 kb on + strand, within MPMX19_00658at 678.941 kb on + strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 678.942 kb on - strand, within MPMX19_00658at 679.145 kb on + strand, within MPMX19_00658at 679.145 kb on + strand, within MPMX19_00658at 679.145 kb on + strand, within MPMX19_00658at 679.145 kb on + strand, within MPMX19_00658at 679.145 kb on + strand, within MPMX19_00658at 679.146 kb on - strand, within MPMX19_00658at 679.146 kb on - strand, within MPMX19_00658at 679.146 kb on - strand, within MPMX19_00658at 679.146 kb on - strand, within MPMX19_00658at 679.146 kb on - strand, within MPMX19_00658at 679.146 kb on - strand, within MPMX19_00658at 679.146 kb on - strand, within MPMX19_00658at 679.146 kb on - strand, within MPMX19_00658at 679.146 kb on - strand, within MPMX19_00658at 679.146 kb on - strand, within MPMX19_00658

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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676,780 + MPMX19_00656 0.60 -1.1
676,780 + MPMX19_00656 0.60 -0.1
676,780 + MPMX19_00656 0.60 +1.1
676,780 + MPMX19_00656 0.60 +0.0
676,780 + MPMX19_00656 0.60 +1.0
676,780 + MPMX19_00656 0.60 -0.0
676,780 + MPMX19_00656 0.60 -0.0
676,780 + MPMX19_00656 0.60 +0.4
676,780 + MPMX19_00656 0.60 -1.2
676,781 - MPMX19_00656 0.60 -0.0
676,781 - MPMX19_00656 0.60 -0.8
676,781 - MPMX19_00656 0.60 +1.2
676,781 - MPMX19_00656 0.60 -0.0
676,781 - MPMX19_00656 0.60 -1.6
676,781 - MPMX19_00656 0.60 -1.7
676,781 - MPMX19_00656 0.60 -0.0
676,781 - MPMX19_00656 0.60 +0.1
676,781 - MPMX19_00656 0.60 +1.0
676,781 - MPMX19_00656 0.60 -1.3
676,781 - MPMX19_00656 0.60 -0.6
676,781 - MPMX19_00656 0.60 +0.3
676,798 + MPMX19_00656 0.61 -0.0
676,798 + MPMX19_00656 0.61 -0.1
676,798 + MPMX19_00656 0.61 -1.1
676,798 + MPMX19_00656 0.61 -0.5
676,798 + MPMX19_00656 0.61 -0.8
676,798 + MPMX19_00656 0.61 -0.7
676,799 - MPMX19_00656 0.61 -0.2
676,799 - MPMX19_00656 0.61 -0.4
676,799 - MPMX19_00656 0.61 -0.4
676,799 - MPMX19_00656 0.61 -0.6
676,799 - MPMX19_00656 0.61 +0.8
676,799 - MPMX19_00656 0.61 +0.4
676,933 + MPMX19_00656 0.69 +0.1
676,933 + MPMX19_00656 0.69 -0.3
676,933 + MPMX19_00656 0.69 -1.2
676,933 + MPMX19_00656 0.69 +0.6
676,933 + MPMX19_00656 0.69 -1.1
676,933 + MPMX19_00656 0.69 -0.4
676,934 - MPMX19_00656 0.69 -0.9
676,934 - MPMX19_00656 0.69 +0.5
676,934 - MPMX19_00656 0.69 -0.7
676,934 - MPMX19_00656 0.69 +0.4
676,934 - MPMX19_00656 0.69 +1.1
676,934 - MPMX19_00656 0.69 -1.4
676,934 - MPMX19_00656 0.69 -0.8
676,934 - MPMX19_00656 0.69 -1.7
677,119 + MPMX19_00656 0.80 -0.1
677,120 - MPMX19_00656 0.80 -1.2
677,120 - MPMX19_00656 0.80 -0.0
677,215 + MPMX19_00656 0.86 +1.0
677,216 - MPMX19_00656 0.86 -0.6
677,216 - MPMX19_00656 0.86 -0.0
677,216 - MPMX19_00656 0.86 +0.2
677,216 - MPMX19_00656 0.86 -0.4
677,216 - MPMX19_00656 0.86 -0.4
677,449 - +2.0
677,449 - +0.5
677,515 + -0.8
677,515 + +2.3
677,515 + -0.0
677,515 + -1.1
677,515 + -0.1
677,515 + +0.7
677,515 + -0.1
677,515 + +1.2
677,515 + -0.7
677,515 + +0.6
677,515 + +0.6
677,515 + -1.0
677,515 + +1.2
677,515 + -0.0
677,515 + -0.4
677,515 + -0.6
677,515 + -0.0
677,515 + +0.6
677,515 + +0.7
677,515 + -1.2
677,515 + +0.4
677,515 + +1.0
677,515 + -1.6
677,516 - -1.3
677,516 - -1.5
677,516 - +0.1
677,516 - +0.9
677,516 - +0.6
677,516 - +1.0
677,516 - -0.5
677,516 - +0.6
677,516 - -0.0
677,516 - +1.4
677,516 - +1.2
677,516 - -0.5
677,516 - -1.0
677,516 - +0.1
677,516 - -0.2
677,516 - -0.8
677,516 - -0.7
677,516 - -0.7
677,516 - -1.8
677,516 - -1.6
677,516 - -0.1
677,516 - -2.0
677,516 - +0.2
677,516 - -0.6
677,516 - -0.2
677,516 - -1.8
677,516 - +0.4
677,518 + -0.7
677,518 + +0.6
677,518 + +0.4
677,518 + -1.6
677,518 + -2.4
677,519 - -0.1
677,519 - -0.2
677,519 - +0.7
677,519 - -1.2
677,519 - -2.5
677,553 + +0.7
677,553 + +0.6
677,553 + +0.4
677,553 + +1.0
677,553 + -0.8
677,553 + +0.6
677,553 + +0.6
677,554 - -0.3
677,554 - +0.2
677,554 - -1.4
677,554 - -2.1
677,554 - -0.7
677,554 - -1.5
677,954 + MPMX19_00657 0.62 +0.5
677,954 + MPMX19_00657 0.62 +0.4
677,954 + MPMX19_00657 0.62 +0.4
678,224 + +1.4
678,224 + +0.2
678,224 + +1.6
678,225 - -1.2
678,408 + MPMX19_00658 0.11 -0.5
678,408 + MPMX19_00658 0.11 +0.2
678,408 + MPMX19_00658 0.11 -1.4
678,408 + MPMX19_00658 0.11 -0.5
678,408 + MPMX19_00658 0.11 +0.2
678,408 + MPMX19_00658 0.11 +0.4
678,408 + MPMX19_00658 0.11 +0.2
678,408 + MPMX19_00658 0.11 -0.6
678,408 + MPMX19_00658 0.11 -0.9
678,408 + MPMX19_00658 0.11 -0.4
678,408 + MPMX19_00658 0.11 -1.2
678,408 + MPMX19_00658 0.11 +0.4
678,408 + MPMX19_00658 0.11 -0.2
678,408 + MPMX19_00658 0.11 -0.5
678,408 + MPMX19_00658 0.11 -0.6
678,409 - MPMX19_00658 0.11 -0.4
678,409 - MPMX19_00658 0.11 -1.1
678,409 - MPMX19_00658 0.11 -0.9
678,409 - MPMX19_00658 0.11 -0.5
678,409 - MPMX19_00658 0.11 -0.2
678,409 - MPMX19_00658 0.11 -1.2
678,409 - MPMX19_00658 0.11 +0.5
678,409 - MPMX19_00658 0.11 -2.8
678,409 - MPMX19_00658 0.11 -0.8
678,409 - MPMX19_00658 0.11 +0.7
678,409 - MPMX19_00658 0.11 -1.6
678,409 - MPMX19_00658 0.11 +1.5
678,409 - MPMX19_00658 0.11 +0.3
678,409 - MPMX19_00658 0.11 -0.1
678,409 - MPMX19_00658 0.11 -0.8
678,941 + MPMX19_00658 0.36 +0.3
678,941 + MPMX19_00658 0.36 +0.6
678,941 + MPMX19_00658 0.36 -0.9
678,941 + MPMX19_00658 0.36 -1.5
678,941 + MPMX19_00658 0.36 +0.4
678,941 + MPMX19_00658 0.36 +0.2
678,941 + MPMX19_00658 0.36 -0.4
678,941 + MPMX19_00658 0.36 -1.3
678,941 + MPMX19_00658 0.36 -0.1
678,941 + MPMX19_00658 0.36 +0.2
678,941 + MPMX19_00658 0.36 -0.8
678,941 + MPMX19_00658 0.36 -0.7
678,942 - MPMX19_00658 0.36 -1.8
678,942 - MPMX19_00658 0.36 -0.8
678,942 - MPMX19_00658 0.36 +1.7
678,942 - MPMX19_00658 0.36 -0.9
678,942 - MPMX19_00658 0.36 -0.0
678,942 - MPMX19_00658 0.36 -1.5
678,942 - MPMX19_00658 0.36 +1.2
678,942 - MPMX19_00658 0.36 -1.1
678,942 - MPMX19_00658 0.36 +0.6
678,942 - MPMX19_00658 0.36 -0.6
678,942 - MPMX19_00658 0.36 +0.0
678,942 - MPMX19_00658 0.36 -0.5
678,942 - MPMX19_00658 0.36 -0.8
678,942 - MPMX19_00658 0.36 +0.9
678,942 - MPMX19_00658 0.36 -1.4
678,942 - MPMX19_00658 0.36 +1.2
679,145 + MPMX19_00658 0.46 -0.2
679,145 + MPMX19_00658 0.46 -0.1
679,145 + MPMX19_00658 0.46 +1.4
679,145 + MPMX19_00658 0.46 -0.3
679,145 + MPMX19_00658 0.46 -0.6
679,146 - MPMX19_00658 0.46 -0.4
679,146 - MPMX19_00658 0.46 +1.2
679,146 - MPMX19_00658 0.46 +0.4
679,146 - MPMX19_00658 0.46 -1.2
679,146 - MPMX19_00658 0.46 -0.8
679,146 - MPMX19_00658 0.46 +0.5
679,146 - MPMX19_00658 0.46 -0.1
679,146 - MPMX19_00658 0.46 -2.1
679,146 - MPMX19_00658 0.46 -0.5
679,146 - MPMX19_00658 0.46 +0.4

Or see this region's nucleotide sequence