Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00517 and MPMX19_00518 are separated by 4 nucleotides MPMX19_00518 and MPMX19_00519 are separated by 151 nucleotides
MPMX19_00517: MPMX19_00517 - HTH-type transcriptional activator AmpR, at 524,332 to 525,222
_00517
MPMX19_00518: MPMX19_00518 - hypothetical protein, at 525,227 to 525,478
_00518
MPMX19_00519: MPMX19_00519 - Glucose-6-phosphate isomerase, at 525,630 to 527,294
_00519
Position (kb)
525
526 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 524.292 kb on + strand at 524.292 kb on + strand at 524.292 kb on + strand at 524.292 kb on + strand at 524.292 kb on + strand at 524.292 kb on + strand at 524.292 kb on + strand at 524.292 kb on + strand at 524.292 kb on + strand at 524.292 kb on + strand at 524.292 kb on + strand at 524.292 kb on + strand at 524.293 kb on - strand at 524.293 kb on - strand at 524.293 kb on - strand at 524.293 kb on - strand at 524.293 kb on - strand at 524.344 kb on + strand at 524.344 kb on + strand at 524.344 kb on + strand at 524.344 kb on + strand at 524.758 kb on + strand, within MPMX19_00517 at 524.758 kb on + strand, within MPMX19_00517 at 524.758 kb on + strand, within MPMX19_00517 at 524.758 kb on + strand, within MPMX19_00517 at 524.758 kb on + strand, within MPMX19_00517 at 524.758 kb on + strand, within MPMX19_00517 at 524.758 kb on + strand, within MPMX19_00517 at 524.758 kb on + strand, within MPMX19_00517 at 524.758 kb on + strand, within MPMX19_00517 at 524.759 kb on - strand, within MPMX19_00517 at 524.759 kb on - strand, within MPMX19_00517 at 524.905 kb on + strand, within MPMX19_00517 at 524.906 kb on - strand, within MPMX19_00517 at 525.124 kb on + strand, within MPMX19_00517 at 525.124 kb on + strand, within MPMX19_00517 at 525.124 kb on + strand, within MPMX19_00517 at 525.125 kb on - strand, within MPMX19_00517 at 525.125 kb on - strand, within MPMX19_00517 at 525.125 kb on - strand, within MPMX19_00517 at 525.125 kb on - strand, within MPMX19_00517 at 525.444 kb on + strand, within MPMX19_00518 at 525.444 kb on + strand, within MPMX19_00518 at 525.444 kb on + strand, within MPMX19_00518 at 525.444 kb on + strand, within MPMX19_00518 at 525.444 kb on + strand, within MPMX19_00518 at 525.444 kb on + strand, within MPMX19_00518 at 525.444 kb on + strand, within MPMX19_00518 at 525.444 kb on + strand, within MPMX19_00518 at 525.445 kb on - strand, within MPMX19_00518 at 525.445 kb on - strand, within MPMX19_00518 at 525.445 kb on - strand, within MPMX19_00518 at 525.445 kb on - strand, within MPMX19_00518 at 525.445 kb on - strand, within MPMX19_00518 at 525.445 kb on - strand, within MPMX19_00518 at 525.445 kb on - strand, within MPMX19_00518 at 525.445 kb on - strand, within MPMX19_00518 at 525.464 kb on + strand at 525.464 kb on + strand at 525.464 kb on + strand at 525.465 kb on - strand at 525.593 kb on + strand at 525.593 kb on + strand at 525.593 kb on + strand at 525.593 kb on + strand at 525.594 kb on - strand at 525.594 kb on - strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.595 kb on + strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.596 kb on - strand at 525.599 kb on + strand at 525.600 kb on - strand at 525.600 kb on - strand at 525.600 kb on - strand at 525.600 kb on - strand at 525.600 kb on - strand at 525.600 kb on - strand at 525.605 kb on + strand at 525.605 kb on + strand at 525.605 kb on + strand at 525.606 kb on - strand at 525.631 kb on + strand at 525.631 kb on + strand at 525.631 kb on + strand at 525.632 kb on - strand at 525.632 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 524,292 + +0.7 524,292 + +0.3 524,292 + -0.2 524,292 + +0.5 524,292 + +1.3 524,292 + +0.7 524,292 + -0.1 524,292 + -1.5 524,292 + +1.8 524,292 + +0.7 524,292 + +0.6 524,292 + -0.7 524,293 - -0.0 524,293 - -1.8 524,293 - +1.2 524,293 - -0.7 524,293 - +1.1 524,344 + +0.7 524,344 + -0.4 524,344 + -0.2 524,344 + -0.8 524,758 + MPMX19_00517 0.48 +1.7 524,758 + MPMX19_00517 0.48 -0.8 524,758 + MPMX19_00517 0.48 -1.4 524,758 + MPMX19_00517 0.48 -1.4 524,758 + MPMX19_00517 0.48 +0.8 524,758 + MPMX19_00517 0.48 -0.1 524,758 + MPMX19_00517 0.48 -1.5 524,758 + MPMX19_00517 0.48 +0.4 524,758 + MPMX19_00517 0.48 +0.5 524,759 - MPMX19_00517 0.48 +1.1 524,759 - MPMX19_00517 0.48 -1.0 524,905 + MPMX19_00517 0.64 -1.5 524,906 - MPMX19_00517 0.64 -0.8 525,124 + MPMX19_00517 0.89 -1.1 525,124 + MPMX19_00517 0.89 -0.5 525,124 + MPMX19_00517 0.89 +1.6 525,125 - MPMX19_00517 0.89 -1.2 525,125 - MPMX19_00517 0.89 +0.1 525,125 - MPMX19_00517 0.89 -0.5 525,125 - MPMX19_00517 0.89 -0.7 525,444 + MPMX19_00518 0.86 -0.5 525,444 + MPMX19_00518 0.86 -0.6 525,444 + MPMX19_00518 0.86 +0.2 525,444 + MPMX19_00518 0.86 -2.9 525,444 + MPMX19_00518 0.86 +1.4 525,444 + MPMX19_00518 0.86 -0.7 525,444 + MPMX19_00518 0.86 +0.7 525,444 + MPMX19_00518 0.86 -0.5 525,445 - MPMX19_00518 0.87 +1.1 525,445 - MPMX19_00518 0.87 -0.2 525,445 - MPMX19_00518 0.87 -0.3 525,445 - MPMX19_00518 0.87 -0.3 525,445 - MPMX19_00518 0.87 -1.9 525,445 - MPMX19_00518 0.87 -0.6 525,445 - MPMX19_00518 0.87 -1.5 525,445 - MPMX19_00518 0.87 +0.0 525,464 + -0.6 525,464 + -1.4 525,464 + -0.8 525,465 - -1.2 525,593 + -0.2 525,593 + +0.4 525,593 + -2.1 525,593 + -0.8 525,594 - +0.2 525,594 - -0.4 525,595 + -0.0 525,595 + -0.6 525,595 + -1.7 525,595 + -0.9 525,595 + -0.0 525,595 + -1.5 525,595 + -2.2 525,595 + -0.2 525,595 + -0.6 525,595 + -0.6 525,595 + -0.2 525,595 + -0.6 525,595 + -0.4 525,595 + -0.8 525,595 + +1.2 525,595 + +0.2 525,595 + -0.2 525,595 + -2.2 525,595 + -0.4 525,595 + -0.5 525,595 + -1.5 525,595 + -2.0 525,595 + -0.8 525,596 - +0.9 525,596 - +1.0 525,596 - -1.2 525,596 - -1.5 525,596 - -0.5 525,596 - -1.1 525,596 - -1.5 525,596 - +0.6 525,596 - +1.1 525,596 - -0.4 525,596 - -1.5 525,596 - +1.2 525,596 - -0.8 525,596 - -0.8 525,596 - -1.2 525,596 - -0.8 525,596 - +0.9 525,596 - +2.3 525,596 - -2.3 525,596 - -0.8 525,596 - -1.4 525,596 - +0.6 525,596 - +1.3 525,596 - -0.6 525,596 - -0.9 525,596 - -1.0 525,599 + -0.7 525,600 - +0.6 525,600 - -2.0 525,600 - -2.4 525,600 - +0.1 525,600 - -1.7 525,600 - -1.4 525,605 + -0.3 525,605 + -0.9 525,605 + -1.5 525,606 - +0.3 525,631 + -0.9 525,631 + +0.2 525,631 + -0.0 525,632 - -1.3 525,632 - -1.4
Or see this region's nucleotide sequence