Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00489 and MPMX19_00490 are separated by 58 nucleotides MPMX19_00490 and MPMX19_00491 are separated by 19 nucleotides MPMX19_00491 and MPMX19_00492 are separated by 119 nucleotides
MPMX19_00489: MPMX19_00489 - hypothetical protein, at 489,828 to 490,760
_00489
MPMX19_00490: MPMX19_00490 - hypothetical protein, at 490,819 to 491,505
_00490
MPMX19_00491: MPMX19_00491 - hypothetical protein, at 491,525 to 492,484
_00491
MPMX19_00492: MPMX19_00492 - Cobalamin biosynthesis protein CbiB, at 492,604 to 493,587
_00492
Position (kb) 491
492
493 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 490.583 kb on + strand, within MPMX19_00489 at 490.583 kb on + strand, within MPMX19_00489 at 490.583 kb on + strand, within MPMX19_00489 at 490.583 kb on + strand, within MPMX19_00489 at 490.584 kb on - strand, within MPMX19_00489 at 490.584 kb on - strand, within MPMX19_00489 at 490.584 kb on - strand, within MPMX19_00489 at 490.584 kb on - strand, within MPMX19_00489 at 490.584 kb on - strand, within MPMX19_00489 at 490.656 kb on + strand, within MPMX19_00489 at 490.656 kb on + strand, within MPMX19_00489 at 490.656 kb on + strand, within MPMX19_00489 at 490.656 kb on + strand, within MPMX19_00489 at 490.657 kb on - strand, within MPMX19_00489 at 490.657 kb on - strand, within MPMX19_00489 at 490.657 kb on - strand, within MPMX19_00489 at 490.657 kb on - strand, within MPMX19_00489 at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.720 kb on + strand at 490.721 kb on - strand at 490.721 kb on - strand at 490.721 kb on - strand at 490.721 kb on - strand at 490.721 kb on - strand at 491.080 kb on + strand, within MPMX19_00490 at 491.080 kb on + strand, within MPMX19_00490 at 491.080 kb on + strand, within MPMX19_00490 at 491.080 kb on + strand, within MPMX19_00490 at 491.080 kb on + strand, within MPMX19_00490 at 491.080 kb on + strand, within MPMX19_00490 at 491.081 kb on - strand, within MPMX19_00490 at 491.081 kb on - strand, within MPMX19_00490 at 491.081 kb on - strand, within MPMX19_00490 at 491.251 kb on + strand, within MPMX19_00490 at 491.251 kb on + strand, within MPMX19_00490 at 491.251 kb on + strand, within MPMX19_00490 at 491.251 kb on + strand, within MPMX19_00490 at 491.251 kb on + strand, within MPMX19_00490 at 491.251 kb on + strand, within MPMX19_00490 at 491.251 kb on + strand, within MPMX19_00490 at 491.251 kb on + strand, within MPMX19_00490 at 491.251 kb on + strand, within MPMX19_00490 at 491.251 kb on + strand, within MPMX19_00490 at 491.252 kb on - strand, within MPMX19_00490 at 491.252 kb on - strand, within MPMX19_00490 at 491.252 kb on - strand, within MPMX19_00490 at 491.252 kb on - strand, within MPMX19_00490 at 491.252 kb on - strand, within MPMX19_00490 at 491.252 kb on - strand, within MPMX19_00490 at 491.252 kb on - strand, within MPMX19_00490 at 491.252 kb on - strand, within MPMX19_00490 at 491.252 kb on - strand, within MPMX19_00490 at 491.294 kb on + strand, within MPMX19_00490 at 491.294 kb on + strand, within MPMX19_00490 at 491.470 kb on + strand at 491.470 kb on + strand at 491.470 kb on + strand at 491.470 kb on + strand at 491.470 kb on + strand at 491.470 kb on + strand at 491.470 kb on + strand at 491.470 kb on + strand at 491.470 kb on + strand at 491.470 kb on + strand at 491.470 kb on + strand at 491.470 kb on + strand at 491.470 kb on + strand at 491.470 kb on + strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.471 kb on - strand at 491.559 kb on + strand at 491.559 kb on + strand at 491.559 kb on + strand at 491.559 kb on + strand at 491.559 kb on + strand at 491.560 kb on - strand at 491.560 kb on - strand at 491.568 kb on + strand at 491.568 kb on + strand at 491.568 kb on + strand at 491.568 kb on + strand at 491.568 kb on + strand at 491.568 kb on + strand at 491.568 kb on + strand at 491.568 kb on + strand at 491.568 kb on + strand at 491.568 kb on + strand at 491.568 kb on + strand at 491.569 kb on - strand at 491.569 kb on - strand at 491.569 kb on - strand at 491.569 kb on - strand at 491.569 kb on - strand at 491.569 kb on - strand at 491.569 kb on - strand at 491.569 kb on - strand at 491.569 kb on - strand at 491.569 kb on - strand at 491.569 kb on - strand at 491.569 kb on - strand at 491.569 kb on - strand at 491.646 kb on + strand, within MPMX19_00491 at 491.646 kb on + strand, within MPMX19_00491 at 491.646 kb on + strand, within MPMX19_00491 at 491.647 kb on - strand, within MPMX19_00491 at 491.673 kb on + strand, within MPMX19_00491 at 491.674 kb on - strand, within MPMX19_00491 at 491.674 kb on - strand, within MPMX19_00491 at 491.674 kb on - strand, within MPMX19_00491 at 491.674 kb on - strand, within MPMX19_00491 at 491.712 kb on + strand, within MPMX19_00491 at 491.712 kb on + strand, within MPMX19_00491 at 491.712 kb on + strand, within MPMX19_00491 at 491.713 kb on - strand, within MPMX19_00491 at 491.713 kb on - strand, within MPMX19_00491 at 491.713 kb on - strand, within MPMX19_00491 at 491.713 kb on - strand, within MPMX19_00491 at 491.713 kb on - strand, within MPMX19_00491 at 491.850 kb on + strand, within MPMX19_00491 at 491.850 kb on + strand, within MPMX19_00491 at 491.850 kb on + strand, within MPMX19_00491 at 491.850 kb on + strand, within MPMX19_00491 at 491.850 kb on + strand, within MPMX19_00491 at 491.851 kb on - strand, within MPMX19_00491 at 491.851 kb on - strand, within MPMX19_00491 at 491.851 kb on - strand, within MPMX19_00491 at 491.851 kb on - strand, within MPMX19_00491 at 491.851 kb on - strand, within MPMX19_00491 at 491.851 kb on - strand, within MPMX19_00491 at 491.907 kb on + strand, within MPMX19_00491 at 491.907 kb on + strand, within MPMX19_00491 at 491.907 kb on + strand, within MPMX19_00491 at 491.907 kb on + strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 491.908 kb on - strand, within MPMX19_00491 at 492.294 kb on + strand, within MPMX19_00491 at 492.294 kb on + strand, within MPMX19_00491 at 492.294 kb on + strand, within MPMX19_00491 at 492.295 kb on - strand, within MPMX19_00491 at 492.295 kb on - strand, within MPMX19_00491 at 492.295 kb on - strand, within MPMX19_00491 at 492.295 kb on - strand, within MPMX19_00491 at 492.295 kb on - strand, within MPMX19_00491 at 492.295 kb on - strand, within MPMX19_00491 at 492.415 kb on + strand at 492.415 kb on + strand at 492.415 kb on + strand at 492.415 kb on + strand at 492.415 kb on + strand at 492.415 kb on + strand at 492.416 kb on - strand at 492.416 kb on - strand at 492.416 kb on - strand at 492.416 kb on - strand at 492.478 kb on + strand at 492.510 kb on + strand at 492.510 kb on + strand at 492.510 kb on + strand at 492.511 kb on - strand at 492.511 kb on - strand at 492.511 kb on - strand at 492.511 kb on - strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.513 kb on + strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.514 kb on - strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.516 kb on + strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.517 kb on - strand at 492.518 kb on + strand at 492.518 kb on + strand at 492.518 kb on + strand at 492.518 kb on + strand at 492.518 kb on + strand at 492.519 kb on - strand at 492.519 kb on - strand at 492.519 kb on - strand at 492.519 kb on - strand at 492.519 kb on - strand at 492.519 kb on - strand at 493.076 kb on + strand, within MPMX19_00492 at 493.077 kb on - strand, within MPMX19_00492 at 493.077 kb on - strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 490,583 + MPMX19_00489 0.81 -2.2 490,583 + MPMX19_00489 0.81 -0.0 490,583 + MPMX19_00489 0.81 +1.6 490,583 + MPMX19_00489 0.81 +1.0 490,584 - MPMX19_00489 0.81 +0.6 490,584 - MPMX19_00489 0.81 -0.0 490,584 - MPMX19_00489 0.81 -0.4 490,584 - MPMX19_00489 0.81 +0.0 490,584 - MPMX19_00489 0.81 -0.0 490,656 + MPMX19_00489 0.89 +0.4 490,656 + MPMX19_00489 0.89 -0.4 490,656 + MPMX19_00489 0.89 +1.1 490,656 + MPMX19_00489 0.89 -0.4 490,657 - MPMX19_00489 0.89 +0.2 490,657 - MPMX19_00489 0.89 -0.8 490,657 - MPMX19_00489 0.89 -0.5 490,657 - MPMX19_00489 0.89 -1.4 490,720 + -1.2 490,720 + +0.7 490,720 + +0.1 490,720 + -0.0 490,720 + +0.5 490,720 + +0.2 490,720 + -0.7 490,720 + -1.5 490,720 + +0.2 490,720 + -0.7 490,720 + -0.4 490,720 + -0.7 490,720 + -0.0 490,720 + -0.1 490,720 + -1.5 490,720 + -0.8 490,721 - -0.6 490,721 - -0.4 490,721 - +0.4 490,721 - -0.8 490,721 - -0.8 491,080 + MPMX19_00490 0.38 -1.1 491,080 + MPMX19_00490 0.38 -0.7 491,080 + MPMX19_00490 0.38 +0.7 491,080 + MPMX19_00490 0.38 -2.1 491,080 + MPMX19_00490 0.38 -0.7 491,080 + MPMX19_00490 0.38 -0.9 491,081 - MPMX19_00490 0.38 -2.3 491,081 - MPMX19_00490 0.38 -1.0 491,081 - MPMX19_00490 0.38 -0.9 491,251 + MPMX19_00490 0.63 -0.4 491,251 + MPMX19_00490 0.63 -0.7 491,251 + MPMX19_00490 0.63 -0.8 491,251 + MPMX19_00490 0.63 -1.1 491,251 + MPMX19_00490 0.63 +1.6 491,251 + MPMX19_00490 0.63 +0.4 491,251 + MPMX19_00490 0.63 +1.0 491,251 + MPMX19_00490 0.63 +1.0 491,251 + MPMX19_00490 0.63 -1.4 491,251 + MPMX19_00490 0.63 +1.0 491,252 - MPMX19_00490 0.63 -1.5 491,252 - MPMX19_00490 0.63 -1.5 491,252 - MPMX19_00490 0.63 -0.2 491,252 - MPMX19_00490 0.63 +0.4 491,252 - MPMX19_00490 0.63 +0.3 491,252 - MPMX19_00490 0.63 +0.6 491,252 - MPMX19_00490 0.63 +0.6 491,252 - MPMX19_00490 0.63 -0.1 491,252 - MPMX19_00490 0.63 -1.6 491,294 + MPMX19_00490 0.69 +0.5 491,294 + MPMX19_00490 0.69 +0.2 491,470 + -1.0 491,470 + +0.7 491,470 + +0.2 491,470 + +0.7 491,470 + +0.6 491,470 + -1.4 491,470 + -1.0 491,470 + -1.6 491,470 + +0.6 491,470 + -1.6 491,470 + -0.6 491,470 + +0.1 491,470 + -0.4 491,470 + +0.0 491,471 - -0.5 491,471 - -0.7 491,471 - -0.1 491,471 - -0.0 491,471 - -0.4 491,471 - -1.4 491,471 - -1.3 491,471 - -1.1 491,471 - -0.1 491,471 - -1.6 491,471 - +0.2 491,471 - -0.0 491,471 - +0.9 491,471 - -0.5 491,471 - -1.1 491,471 - +0.8 491,471 - -1.4 491,471 - -1.1 491,471 - -0.8 491,471 - -0.1 491,471 - -0.2 491,471 - +0.6 491,471 - -0.2 491,471 - -1.0 491,471 - -0.5 491,471 - -0.9 491,471 - +0.5 491,471 - -1.2 491,559 + -1.8 491,559 + -0.4 491,559 + +0.4 491,559 + +0.7 491,559 + -0.2 491,560 - -0.1 491,560 - -0.6 491,568 + +0.5 491,568 + +0.6 491,568 + -0.8 491,568 + +0.5 491,568 + +0.8 491,568 + -0.6 491,568 + -0.8 491,568 + +1.0 491,568 + -0.8 491,568 + -0.0 491,568 + -0.0 491,569 - +1.2 491,569 - -0.1 491,569 - -0.8 491,569 - -0.4 491,569 - -1.7 491,569 - -0.1 491,569 - +0.1 491,569 - +0.2 491,569 - +1.5 491,569 - -1.1 491,569 - -1.2 491,569 - -1.6 491,569 - -1.6 491,646 + MPMX19_00491 0.13 +1.0 491,646 + MPMX19_00491 0.13 +0.8 491,646 + MPMX19_00491 0.13 -0.4 491,647 - MPMX19_00491 0.13 -1.2 491,673 + MPMX19_00491 0.15 -0.5 491,674 - MPMX19_00491 0.16 -0.1 491,674 - MPMX19_00491 0.16 +0.2 491,674 - MPMX19_00491 0.16 -0.8 491,674 - MPMX19_00491 0.16 -1.2 491,712 + MPMX19_00491 0.19 +3.1 491,712 + MPMX19_00491 0.19 +1.5 491,712 + MPMX19_00491 0.19 -1.0 491,713 - MPMX19_00491 0.20 -0.0 491,713 - MPMX19_00491 0.20 +0.2 491,713 - MPMX19_00491 0.20 -2.1 491,713 - MPMX19_00491 0.20 -1.2 491,713 - MPMX19_00491 0.20 -0.3 491,850 + MPMX19_00491 0.34 +0.5 491,850 + MPMX19_00491 0.34 +1.2 491,850 + MPMX19_00491 0.34 +0.4 491,850 + MPMX19_00491 0.34 +0.1 491,850 + MPMX19_00491 0.34 +0.8 491,851 - MPMX19_00491 0.34 -0.8 491,851 - MPMX19_00491 0.34 +0.4 491,851 - MPMX19_00491 0.34 +0.2 491,851 - MPMX19_00491 0.34 +1.0 491,851 - MPMX19_00491 0.34 -2.4 491,851 - MPMX19_00491 0.34 -1.4 491,907 + MPMX19_00491 0.40 -1.0 491,907 + MPMX19_00491 0.40 -0.1 491,907 + MPMX19_00491 0.40 +1.0 491,907 + MPMX19_00491 0.40 -1.9 491,908 - MPMX19_00491 0.40 +0.5 491,908 - MPMX19_00491 0.40 +1.6 491,908 - MPMX19_00491 0.40 +0.6 491,908 - MPMX19_00491 0.40 -0.6 491,908 - MPMX19_00491 0.40 +1.0 491,908 - MPMX19_00491 0.40 -0.5 491,908 - MPMX19_00491 0.40 +1.1 491,908 - MPMX19_00491 0.40 +0.4 491,908 - MPMX19_00491 0.40 +1.6 491,908 - MPMX19_00491 0.40 +0.4 492,294 + MPMX19_00491 0.80 +0.6 492,294 + MPMX19_00491 0.80 -1.2 492,294 + MPMX19_00491 0.80 -0.8 492,295 - MPMX19_00491 0.80 +2.0 492,295 - MPMX19_00491 0.80 -1.8 492,295 - MPMX19_00491 0.80 -2.5 492,295 - MPMX19_00491 0.80 +0.9 492,295 - MPMX19_00491 0.80 -1.8 492,295 - MPMX19_00491 0.80 -0.0 492,415 + -0.2 492,415 + +0.1 492,415 + -0.3 492,415 + -0.4 492,415 + -0.1 492,415 + +1.1 492,416 - -0.2 492,416 - -0.1 492,416 - -0.4 492,416 - +0.4 492,478 + -0.0 492,510 + -2.1 492,510 + -1.5 492,510 + -0.7 492,511 - +0.6 492,511 - +0.7 492,511 - -0.0 492,511 - +0.8 492,513 + +1.0 492,513 + -0.2 492,513 + -0.1 492,513 + +0.1 492,513 + +1.4 492,513 + -0.4 492,513 + -0.8 492,513 + +0.1 492,513 + -2.2 492,513 + -1.0 492,513 + -1.0 492,513 + -0.4 492,513 + -1.8 492,513 + +0.9 492,513 + -0.8 492,513 + -0.4 492,514 - -0.8 492,514 - +0.8 492,514 - +0.1 492,514 - -1.4 492,514 - -0.0 492,514 - +0.4 492,514 - -0.8 492,514 - -1.5 492,514 - +0.7 492,514 - +0.8 492,514 - -1.0 492,514 - -0.4 492,514 - -0.1 492,514 - +0.2 492,514 - -2.1 492,514 - -0.6 492,514 - +2.0 492,514 - -0.6 492,514 - -1.4 492,514 - +2.0 492,514 - +0.5 492,514 - -0.1 492,514 - -0.9 492,514 - +0.3 492,516 + -2.2 492,516 + -1.7 492,516 + +1.4 492,516 + -0.2 492,516 + +0.5 492,516 + -0.4 492,516 + -0.9 492,516 + +0.3 492,516 + -2.2 492,516 + +0.3 492,516 + -1.0 492,516 + -0.4 492,516 + -1.2 492,516 + +0.3 492,516 + +0.1 492,516 + -0.5 492,517 - +0.5 492,517 - +0.2 492,517 - +0.8 492,517 - -0.6 492,517 - -0.0 492,517 - +0.7 492,517 - -1.0 492,517 - -0.8 492,517 - +0.9 492,517 - -0.6 492,517 - +1.2 492,517 - +0.6 492,517 - -0.7 492,517 - -1.0 492,517 - -1.9 492,517 - -0.5 492,518 + -0.7 492,518 + -0.9 492,518 + -0.0 492,518 + -1.3 492,518 + -2.7 492,519 - -0.0 492,519 - -0.2 492,519 - +1.0 492,519 - -0.4 492,519 - -0.6 492,519 - +0.8 493,076 + MPMX19_00492 0.48 -0.4 493,077 - MPMX19_00492 0.48 +0.4 493,077 - MPMX19_00492 0.48 -0.6 493,166 + MPMX19_00492 0.57 -0.2 493,166 + MPMX19_00492 0.57 -0.3 493,166 + MPMX19_00492 0.57 +1.4 493,166 + MPMX19_00492 0.57 +0.2 493,166 + MPMX19_00492 0.57 -0.1 493,166 + MPMX19_00492 0.57 -2.6 493,166 + MPMX19_00492 0.57 +0.2 493,167 - MPMX19_00492 0.57 -0.2 493,167 - MPMX19_00492 0.57 -0.4 493,167 - MPMX19_00492 0.57 +0.3 493,167 - MPMX19_00492 0.57 +0.3 493,167 - MPMX19_00492 0.57 -1.2 493,167 - MPMX19_00492 0.57 -0.4
Or see this region's nucleotide sequence