Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00414

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00412 and MPMX19_00413 overlap by 1 nucleotidesMPMX19_00413 and MPMX19_00414 are separated by 93 nucleotidesMPMX19_00414 and MPMX19_00415 are separated by 163 nucleotides MPMX19_00412: MPMX19_00412 - Protein translocase subunit SecY, at 411,240 to 412,580 _00412 MPMX19_00413: MPMX19_00413 - Adenylate kinase, at 412,580 to 413,227 _00413 MPMX19_00414: MPMX19_00414 - Pyruvate dehydrogenase complex repressor, at 413,321 to 414,094 _00414 MPMX19_00415: MPMX19_00415 - hypothetical protein, at 414,258 to 415,175 _00415 Position (kb) 413 414 415Strain fitness (log2 ratio) -2 -1 0 1 2at 413.246 kb on + strandat 413.246 kb on + strandat 413.592 kb on + strand, within MPMX19_00414at 413.593 kb on - strand, within MPMX19_00414at 413.593 kb on - strand, within MPMX19_00414at 413.593 kb on - strand, within MPMX19_00414at 413.593 kb on - strand, within MPMX19_00414at 414.141 kb on + strandat 414.141 kb on + strandat 414.141 kb on + strandat 414.217 kb on + strandat 414.217 kb on + strandat 414.217 kb on + strandat 414.218 kb on - strandat 414.282 kb on + strandat 414.282 kb on + strandat 414.282 kb on + strandat 414.282 kb on + strandat 414.282 kb on + strandat 414.282 kb on + strandat 414.282 kb on + strandat 414.282 kb on + strandat 414.283 kb on - strandat 414.283 kb on - strandat 414.283 kb on - strandat 414.283 kb on - strandat 414.283 kb on - strandat 414.283 kb on - strandat 414.430 kb on + strand, within MPMX19_00415at 414.430 kb on + strand, within MPMX19_00415at 414.431 kb on - strand, within MPMX19_00415at 414.431 kb on - strand, within MPMX19_00415at 414.431 kb on - strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.529 kb on + strand, within MPMX19_00415at 414.530 kb on - strand, within MPMX19_00415at 414.530 kb on - strand, within MPMX19_00415at 414.530 kb on - strand, within MPMX19_00415at 414.530 kb on - strand, within MPMX19_00415at 414.530 kb on - strand, within MPMX19_00415at 414.530 kb on - strand, within MPMX19_00415at 414.530 kb on - strand, within MPMX19_00415at 414.530 kb on - strand, within MPMX19_00415at 414.530 kb on - strand, within MPMX19_00415at 414.530 kb on - strand, within MPMX19_00415at 414.631 kb on + strand, within MPMX19_00415at 414.631 kb on + strand, within MPMX19_00415at 414.631 kb on + strand, within MPMX19_00415at 414.631 kb on + strand, within MPMX19_00415at 414.631 kb on + strand, within MPMX19_00415at 414.631 kb on + strand, within MPMX19_00415at 414.631 kb on + strand, within MPMX19_00415at 414.631 kb on + strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.632 kb on - strand, within MPMX19_00415at 414.640 kb on + strand, within MPMX19_00415at 414.640 kb on + strand, within MPMX19_00415at 414.640 kb on + strand, within MPMX19_00415at 414.640 kb on + strand, within MPMX19_00415at 414.640 kb on + strand, within MPMX19_00415at 414.640 kb on + strand, within MPMX19_00415at 414.640 kb on + strand, within MPMX19_00415at 414.640 kb on + strand, within MPMX19_00415at 414.640 kb on + strand, within MPMX19_00415at 414.640 kb on + strand, within MPMX19_00415at 414.640 kb on + strand, within MPMX19_00415at 414.640 kb on + strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.641 kb on - strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.808 kb on + strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.809 kb on - strand, within MPMX19_00415at 414.856 kb on + strand, within MPMX19_00415at 414.856 kb on + strand, within MPMX19_00415at 414.856 kb on + strand, within MPMX19_00415at 414.856 kb on + strand, within MPMX19_00415at 414.857 kb on - strand, within MPMX19_00415at 414.925 kb on + strand, within MPMX19_00415at 414.925 kb on + strand, within MPMX19_00415at 414.925 kb on + strand, within MPMX19_00415at 414.925 kb on + strand, within MPMX19_00415at 414.925 kb on + strand, within MPMX19_00415at 414.925 kb on + strand, within MPMX19_00415at 414.925 kb on + strand, within MPMX19_00415at 414.926 kb on - strand, within MPMX19_00415at 414.926 kb on - strand, within MPMX19_00415at 414.926 kb on - strand, within MPMX19_00415at 414.926 kb on - strand, within MPMX19_00415at 414.926 kb on - strand, within MPMX19_00415at 414.926 kb on - strand, within MPMX19_00415at 414.926 kb on - strand, within MPMX19_00415at 414.926 kb on - strand, within MPMX19_00415at 414.926 kb on - strand, within MPMX19_00415at 414.926 kb on - strand, within MPMX19_00415at 414.993 kb on + strand, within MPMX19_00415at 414.993 kb on + strand, within MPMX19_00415at 414.993 kb on + strand, within MPMX19_00415at 414.993 kb on + strand, within MPMX19_00415at 414.993 kb on + strand, within MPMX19_00415at 414.993 kb on + strand, within MPMX19_00415at 414.993 kb on + strand, within MPMX19_00415at 414.994 kb on - strand, within MPMX19_00415at 414.994 kb on - strand, within MPMX19_00415at 414.994 kb on - strand, within MPMX19_00415

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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413,246 + -2.1
413,246 + -1.8
413,592 + MPMX19_00414 0.35 +0.4
413,593 - MPMX19_00414 0.35 -0.8
413,593 - MPMX19_00414 0.35 -0.0
413,593 - MPMX19_00414 0.35 -0.8
413,593 - MPMX19_00414 0.35 -1.0
414,141 + +0.4
414,141 + -0.2
414,141 + -0.1
414,217 + +0.4
414,217 + -0.8
414,217 + -0.6
414,218 - -1.8
414,282 + +0.6
414,282 + +1.3
414,282 + +0.2
414,282 + +2.0
414,282 + -0.1
414,282 + +0.2
414,282 + -0.0
414,282 + +0.6
414,283 - -1.0
414,283 - +0.2
414,283 - -0.8
414,283 - +1.0
414,283 - +0.1
414,283 - -1.8
414,430 + MPMX19_00415 0.19 +0.4
414,430 + MPMX19_00415 0.19 -0.8
414,431 - MPMX19_00415 0.19 +1.6
414,431 - MPMX19_00415 0.19 -1.0
414,431 - MPMX19_00415 0.19 +0.6
414,529 + MPMX19_00415 0.30 -1.9
414,529 + MPMX19_00415 0.30 +1.0
414,529 + MPMX19_00415 0.30 -1.5
414,529 + MPMX19_00415 0.30 +0.6
414,529 + MPMX19_00415 0.30 -0.8
414,529 + MPMX19_00415 0.30 -1.5
414,529 + MPMX19_00415 0.30 +0.8
414,529 + MPMX19_00415 0.30 +0.7
414,529 + MPMX19_00415 0.30 +0.2
414,529 + MPMX19_00415 0.30 +1.0
414,529 + MPMX19_00415 0.30 +0.8
414,529 + MPMX19_00415 0.30 +1.0
414,529 + MPMX19_00415 0.30 +0.5
414,529 + MPMX19_00415 0.30 +1.7
414,529 + MPMX19_00415 0.30 -0.6
414,529 + MPMX19_00415 0.30 -0.8
414,529 + MPMX19_00415 0.30 +0.1
414,529 + MPMX19_00415 0.30 +0.7
414,530 - MPMX19_00415 0.30 +1.3
414,530 - MPMX19_00415 0.30 -1.1
414,530 - MPMX19_00415 0.30 -0.3
414,530 - MPMX19_00415 0.30 -1.1
414,530 - MPMX19_00415 0.30 -0.4
414,530 - MPMX19_00415 0.30 -0.6
414,530 - MPMX19_00415 0.30 -1.4
414,530 - MPMX19_00415 0.30 -1.4
414,530 - MPMX19_00415 0.30 +0.2
414,530 - MPMX19_00415 0.30 -1.2
414,631 + MPMX19_00415 0.41 -0.5
414,631 + MPMX19_00415 0.41 +0.5
414,631 + MPMX19_00415 0.41 -1.9
414,631 + MPMX19_00415 0.41 -0.2
414,631 + MPMX19_00415 0.41 +0.6
414,631 + MPMX19_00415 0.41 -2.1
414,631 + MPMX19_00415 0.41 -0.5
414,631 + MPMX19_00415 0.41 -0.7
414,632 - MPMX19_00415 0.41 +1.1
414,632 - MPMX19_00415 0.41 -0.6
414,632 - MPMX19_00415 0.41 +2.0
414,632 - MPMX19_00415 0.41 -0.4
414,632 - MPMX19_00415 0.41 +0.6
414,632 - MPMX19_00415 0.41 +0.2
414,632 - MPMX19_00415 0.41 +0.8
414,632 - MPMX19_00415 0.41 -0.7
414,632 - MPMX19_00415 0.41 -0.5
414,632 - MPMX19_00415 0.41 +0.5
414,632 - MPMX19_00415 0.41 -0.9
414,632 - MPMX19_00415 0.41 +1.0
414,632 - MPMX19_00415 0.41 -0.4
414,632 - MPMX19_00415 0.41 -0.5
414,640 + MPMX19_00415 0.42 -0.1
414,640 + MPMX19_00415 0.42 -1.2
414,640 + MPMX19_00415 0.42 -1.6
414,640 + MPMX19_00415 0.42 -1.4
414,640 + MPMX19_00415 0.42 +1.2
414,640 + MPMX19_00415 0.42 -0.2
414,640 + MPMX19_00415 0.42 -0.1
414,640 + MPMX19_00415 0.42 -2.6
414,640 + MPMX19_00415 0.42 +0.0
414,640 + MPMX19_00415 0.42 -1.3
414,640 + MPMX19_00415 0.42 +0.6
414,640 + MPMX19_00415 0.42 +0.1
414,641 - MPMX19_00415 0.42 +0.1
414,641 - MPMX19_00415 0.42 -1.0
414,641 - MPMX19_00415 0.42 -1.4
414,641 - MPMX19_00415 0.42 +0.2
414,641 - MPMX19_00415 0.42 -1.2
414,641 - MPMX19_00415 0.42 -0.5
414,641 - MPMX19_00415 0.42 -0.7
414,641 - MPMX19_00415 0.42 +0.3
414,641 - MPMX19_00415 0.42 +0.4
414,641 - MPMX19_00415 0.42 -1.2
414,641 - MPMX19_00415 0.42 -2.2
414,641 - MPMX19_00415 0.42 -1.8
414,641 - MPMX19_00415 0.42 -2.2
414,641 - MPMX19_00415 0.42 +1.4
414,641 - MPMX19_00415 0.42 -1.6
414,641 - MPMX19_00415 0.42 -0.4
414,641 - MPMX19_00415 0.42 +1.2
414,808 + MPMX19_00415 0.60 +0.6
414,808 + MPMX19_00415 0.60 +0.2
414,808 + MPMX19_00415 0.60 -0.8
414,808 + MPMX19_00415 0.60 +0.2
414,808 + MPMX19_00415 0.60 -0.8
414,808 + MPMX19_00415 0.60 +1.4
414,808 + MPMX19_00415 0.60 +0.9
414,808 + MPMX19_00415 0.60 -0.8
414,808 + MPMX19_00415 0.60 -0.7
414,808 + MPMX19_00415 0.60 -1.1
414,808 + MPMX19_00415 0.60 -1.6
414,808 + MPMX19_00415 0.60 +0.4
414,808 + MPMX19_00415 0.60 -0.6
414,808 + MPMX19_00415 0.60 +2.0
414,808 + MPMX19_00415 0.60 -1.5
414,808 + MPMX19_00415 0.60 +0.7
414,808 + MPMX19_00415 0.60 -0.5
414,808 + MPMX19_00415 0.60 +0.2
414,808 + MPMX19_00415 0.60 -0.4
414,809 - MPMX19_00415 0.60 -1.7
414,809 - MPMX19_00415 0.60 +0.5
414,809 - MPMX19_00415 0.60 -0.4
414,809 - MPMX19_00415 0.60 +1.2
414,809 - MPMX19_00415 0.60 +1.0
414,809 - MPMX19_00415 0.60 +0.6
414,809 - MPMX19_00415 0.60 -0.6
414,809 - MPMX19_00415 0.60 -0.4
414,809 - MPMX19_00415 0.60 +0.6
414,809 - MPMX19_00415 0.60 -1.1
414,809 - MPMX19_00415 0.60 -0.6
414,809 - MPMX19_00415 0.60 +0.6
414,809 - MPMX19_00415 0.60 -0.8
414,856 + MPMX19_00415 0.65 +0.6
414,856 + MPMX19_00415 0.65 -0.7
414,856 + MPMX19_00415 0.65 -0.9
414,856 + MPMX19_00415 0.65 -0.3
414,857 - MPMX19_00415 0.65 -0.5
414,925 + MPMX19_00415 0.73 -0.6
414,925 + MPMX19_00415 0.73 -1.9
414,925 + MPMX19_00415 0.73 -1.2
414,925 + MPMX19_00415 0.73 +0.2
414,925 + MPMX19_00415 0.73 -0.6
414,925 + MPMX19_00415 0.73 +0.5
414,925 + MPMX19_00415 0.73 -0.5
414,926 - MPMX19_00415 0.73 +0.4
414,926 - MPMX19_00415 0.73 +0.1
414,926 - MPMX19_00415 0.73 +0.2
414,926 - MPMX19_00415 0.73 -0.6
414,926 - MPMX19_00415 0.73 -0.6
414,926 - MPMX19_00415 0.73 -0.6
414,926 - MPMX19_00415 0.73 +0.6
414,926 - MPMX19_00415 0.73 -0.4
414,926 - MPMX19_00415 0.73 -1.7
414,926 - MPMX19_00415 0.73 -0.0
414,993 + MPMX19_00415 0.80 -1.4
414,993 + MPMX19_00415 0.80 +0.3
414,993 + MPMX19_00415 0.80 -0.5
414,993 + MPMX19_00415 0.80 +0.1
414,993 + MPMX19_00415 0.80 -1.0
414,993 + MPMX19_00415 0.80 +1.6
414,993 + MPMX19_00415 0.80 -1.6
414,994 - MPMX19_00415 0.80 -1.0
414,994 - MPMX19_00415 0.80 -1.2
414,994 - MPMX19_00415 0.80 -1.0

Or see this region's nucleotide sequence