Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00184 and MPMX19_00185 are separated by 274 nucleotides
MPMX19_00184: MPMX19_00184 - hypothetical protein, at 192,824 to 193,495
_00184
MPMX19_00185: MPMX19_00185 - hypothetical protein, at 193,770 to 194,534
_00185
Position (kb) 193
194
195 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 192.786 kb on + strand at 192.787 kb on - strand at 192.804 kb on + strand at 192.881 kb on + strand at 192.990 kb on + strand, within MPMX19_00184 at 192.991 kb on - strand, within MPMX19_00184 at 193.052 kb on - strand, within MPMX19_00184 at 193.068 kb on - strand, within MPMX19_00184 at 193.084 kb on - strand, within MPMX19_00184 at 193.084 kb on - strand, within MPMX19_00184 at 193.172 kb on + strand, within MPMX19_00184 at 193.173 kb on - strand, within MPMX19_00184 at 193.176 kb on + strand, within MPMX19_00184 at 193.242 kb on + strand, within MPMX19_00184 at 193.242 kb on + strand, within MPMX19_00184 at 193.243 kb on - strand, within MPMX19_00184 at 193.243 kb on - strand, within MPMX19_00184 at 193.243 kb on - strand, within MPMX19_00184 at 193.289 kb on - strand, within MPMX19_00184 at 193.309 kb on - strand, within MPMX19_00184 at 193.361 kb on + strand, within MPMX19_00184 at 193.362 kb on - strand, within MPMX19_00184 at 193.436 kb on + strand at 193.436 kb on + strand at 193.436 kb on + strand at 193.436 kb on + strand at 193.436 kb on + strand at 193.436 kb on + strand at 193.436 kb on + strand at 193.436 kb on + strand at 193.437 kb on - strand at 193.437 kb on - strand at 193.437 kb on - strand at 193.437 kb on - strand at 193.445 kb on + strand at 193.445 kb on + strand at 193.445 kb on + strand at 193.445 kb on + strand at 193.446 kb on - strand at 193.446 kb on - strand at 193.446 kb on - strand at 193.446 kb on - strand at 193.446 kb on - strand at 193.458 kb on - strand at 193.515 kb on + strand at 193.515 kb on + strand at 193.515 kb on + strand at 193.516 kb on - strand at 193.516 kb on - strand at 193.516 kb on - strand at 193.516 kb on - strand at 193.553 kb on + strand at 193.553 kb on + strand at 193.554 kb on - strand at 193.693 kb on + strand at 193.693 kb on + strand at 193.693 kb on + strand at 193.693 kb on + strand at 193.694 kb on - strand at 193.694 kb on - strand at 193.724 kb on + strand at 193.724 kb on + strand at 193.805 kb on + strand at 193.805 kb on + strand at 193.805 kb on + strand at 193.805 kb on + strand at 193.805 kb on + strand at 193.805 kb on + strand at 193.805 kb on + strand at 193.805 kb on + strand at 193.805 kb on + strand at 193.806 kb on - strand at 193.806 kb on - strand at 193.806 kb on - strand at 193.806 kb on - strand at 193.806 kb on - strand at 193.806 kb on - strand at 193.806 kb on - strand at 193.806 kb on - strand at 193.806 kb on - strand at 193.806 kb on - strand at 193.806 kb on - strand at 193.846 kb on + strand at 193.846 kb on + strand at 193.847 kb on - strand, within MPMX19_00185 at 193.847 kb on - strand, within MPMX19_00185 at 193.847 kb on - strand, within MPMX19_00185 at 193.847 kb on - strand, within MPMX19_00185 at 193.897 kb on - strand, within MPMX19_00185 at 193.897 kb on - strand, within MPMX19_00185 at 193.897 kb on - strand, within MPMX19_00185 at 193.897 kb on - strand, within MPMX19_00185 at 193.914 kb on + strand, within MPMX19_00185 at 193.914 kb on + strand, within MPMX19_00185 at 193.915 kb on - strand, within MPMX19_00185 at 193.915 kb on - strand, within MPMX19_00185 at 193.961 kb on - strand, within MPMX19_00185 at 193.979 kb on - strand, within MPMX19_00185 at 194.018 kb on + strand, within MPMX19_00185 at 194.019 kb on - strand, within MPMX19_00185 at 194.019 kb on - strand, within MPMX19_00185 at 194.019 kb on - strand, within MPMX19_00185 at 194.069 kb on + strand, within MPMX19_00185 at 194.069 kb on + strand, within MPMX19_00185 at 194.069 kb on + strand, within MPMX19_00185 at 194.069 kb on + strand, within MPMX19_00185 at 194.069 kb on + strand, within MPMX19_00185 at 194.069 kb on + strand, within MPMX19_00185 at 194.070 kb on - strand, within MPMX19_00185 at 194.070 kb on - strand, within MPMX19_00185 at 194.070 kb on - strand, within MPMX19_00185 at 194.123 kb on + strand, within MPMX19_00185 at 194.123 kb on + strand, within MPMX19_00185 at 194.123 kb on + strand, within MPMX19_00185 at 194.123 kb on + strand, within MPMX19_00185 at 194.123 kb on + strand, within MPMX19_00185 at 194.123 kb on + strand, within MPMX19_00185 at 194.123 kb on + strand, within MPMX19_00185 at 194.123 kb on + strand, within MPMX19_00185 at 194.123 kb on + strand, within MPMX19_00185 at 194.124 kb on - strand, within MPMX19_00185 at 194.124 kb on - strand, within MPMX19_00185 at 194.124 kb on - strand, within MPMX19_00185 at 194.124 kb on - strand, within MPMX19_00185 at 194.124 kb on - strand, within MPMX19_00185 at 194.124 kb on - strand, within MPMX19_00185 at 194.124 kb on - strand, within MPMX19_00185 at 194.124 kb on - strand, within MPMX19_00185 at 194.169 kb on - strand, within MPMX19_00185 at 194.204 kb on + strand, within MPMX19_00185 at 194.204 kb on + strand, within MPMX19_00185 at 194.204 kb on + strand, within MPMX19_00185 at 194.204 kb on + strand, within MPMX19_00185 at 194.204 kb on + strand, within MPMX19_00185 at 194.204 kb on + strand, within MPMX19_00185 at 194.204 kb on + strand, within MPMX19_00185 at 194.204 kb on + strand, within MPMX19_00185 at 194.204 kb on + strand, within MPMX19_00185 at 194.205 kb on - strand, within MPMX19_00185 at 194.205 kb on - strand, within MPMX19_00185 at 194.205 kb on - strand, within MPMX19_00185 at 194.205 kb on - strand, within MPMX19_00185 at 194.205 kb on - strand, within MPMX19_00185 at 194.205 kb on - strand, within MPMX19_00185 at 194.205 kb on - strand, within MPMX19_00185 at 194.205 kb on - strand, within MPMX19_00185 at 194.219 kb on + strand, within MPMX19_00185 at 194.219 kb on + strand, within MPMX19_00185 at 194.220 kb on - strand, within MPMX19_00185 at 194.261 kb on + strand, within MPMX19_00185 at 194.261 kb on + strand, within MPMX19_00185 at 194.262 kb on - strand, within MPMX19_00185 at 194.262 kb on - strand, within MPMX19_00185 at 194.287 kb on + strand, within MPMX19_00185 at 194.287 kb on + strand, within MPMX19_00185 at 194.288 kb on - strand, within MPMX19_00185 at 194.288 kb on - strand, within MPMX19_00185 at 194.288 kb on - strand, within MPMX19_00185 at 194.362 kb on + strand, within MPMX19_00185 at 194.362 kb on + strand, within MPMX19_00185 at 194.417 kb on - strand, within MPMX19_00185 at 194.434 kb on + strand, within MPMX19_00185 at 194.477 kb on + strand at 194.477 kb on + strand at 194.478 kb on - strand at 194.505 kb on - strand at 194.523 kb on - strand at 194.523 kb on - strand at 194.523 kb on - strand at 194.523 kb on - strand at 194.533 kb on - strand at 194.533 kb on - strand at 194.533 kb on - strand at 194.533 kb on - strand at 194.533 kb on - strand at 195.368 kb on + strand at 195.377 kb on + strand at 195.466 kb on - strand at 195.466 kb on - strand at 195.476 kb on - strand at 195.487 kb on + strand at 195.488 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 192,786 + +2.0 192,787 - -0.1 192,804 + +0.2 192,881 + +1.3 192,990 + MPMX19_00184 0.25 +0.4 192,991 - MPMX19_00184 0.25 -1.1 193,052 - MPMX19_00184 0.34 -1.3 193,068 - MPMX19_00184 0.36 -1.6 193,084 - MPMX19_00184 0.39 -0.6 193,084 - MPMX19_00184 0.39 -0.2 193,172 + MPMX19_00184 0.52 -0.5 193,173 - MPMX19_00184 0.52 -0.0 193,176 + MPMX19_00184 0.52 -0.8 193,242 + MPMX19_00184 0.62 -1.4 193,242 + MPMX19_00184 0.62 +0.7 193,243 - MPMX19_00184 0.62 -1.7 193,243 - MPMX19_00184 0.62 -0.4 193,243 - MPMX19_00184 0.62 -1.0 193,289 - MPMX19_00184 0.69 -0.2 193,309 - MPMX19_00184 0.72 +0.0 193,361 + MPMX19_00184 0.80 -1.7 193,362 - MPMX19_00184 0.80 -0.3 193,436 + +0.8 193,436 + +0.4 193,436 + -0.2 193,436 + -0.2 193,436 + +0.0 193,436 + -1.7 193,436 + -0.4 193,436 + +0.3 193,437 - +0.2 193,437 - -0.1 193,437 - -0.6 193,437 - +1.4 193,445 + +0.6 193,445 + -1.6 193,445 + -0.6 193,445 + -0.4 193,446 - +1.0 193,446 - -2.1 193,446 - +0.0 193,446 - -0.5 193,446 - +1.4 193,458 - -0.8 193,515 + +2.0 193,515 + +1.5 193,515 + -0.4 193,516 - +0.6 193,516 - -0.7 193,516 - -0.1 193,516 - +0.2 193,553 + +0.1 193,553 + -0.8 193,554 - +1.8 193,693 + +0.4 193,693 + -0.3 193,693 + +0.2 193,693 + -2.5 193,694 - -0.1 193,694 - -2.9 193,724 + -0.8 193,724 + -1.1 193,805 + -0.7 193,805 + -0.1 193,805 + +0.2 193,805 + +0.4 193,805 + +0.4 193,805 + -0.1 193,805 + +0.1 193,805 + -1.1 193,805 + -1.9 193,806 - -0.4 193,806 - -1.0 193,806 - -0.1 193,806 - -0.6 193,806 - -1.5 193,806 - -0.8 193,806 - -1.0 193,806 - -0.1 193,806 - -1.3 193,806 - -1.2 193,806 - +0.6 193,846 + -0.6 193,846 + +0.0 193,847 - MPMX19_00185 0.10 -0.7 193,847 - MPMX19_00185 0.10 -1.1 193,847 - MPMX19_00185 0.10 +1.0 193,847 - MPMX19_00185 0.10 -1.2 193,897 - MPMX19_00185 0.17 +1.6 193,897 - MPMX19_00185 0.17 -0.0 193,897 - MPMX19_00185 0.17 -1.1 193,897 - MPMX19_00185 0.17 -0.3 193,914 + MPMX19_00185 0.19 +1.4 193,914 + MPMX19_00185 0.19 +0.0 193,915 - MPMX19_00185 0.19 -1.6 193,915 - MPMX19_00185 0.19 +0.7 193,961 - MPMX19_00185 0.25 -1.9 193,979 - MPMX19_00185 0.27 +0.8 194,018 + MPMX19_00185 0.32 +0.8 194,019 - MPMX19_00185 0.33 +0.9 194,019 - MPMX19_00185 0.33 -1.0 194,019 - MPMX19_00185 0.33 -0.5 194,069 + MPMX19_00185 0.39 +0.1 194,069 + MPMX19_00185 0.39 +1.3 194,069 + MPMX19_00185 0.39 +1.0 194,069 + MPMX19_00185 0.39 -0.9 194,069 + MPMX19_00185 0.39 -0.6 194,069 + MPMX19_00185 0.39 +0.0 194,070 - MPMX19_00185 0.39 -1.3 194,070 - MPMX19_00185 0.39 -0.3 194,070 - MPMX19_00185 0.39 +0.4 194,123 + MPMX19_00185 0.46 -1.1 194,123 + MPMX19_00185 0.46 +1.0 194,123 + MPMX19_00185 0.46 +0.0 194,123 + MPMX19_00185 0.46 -2.1 194,123 + MPMX19_00185 0.46 -0.9 194,123 + MPMX19_00185 0.46 -0.2 194,123 + MPMX19_00185 0.46 -0.3 194,123 + MPMX19_00185 0.46 -1.5 194,123 + MPMX19_00185 0.46 -0.3 194,124 - MPMX19_00185 0.46 -1.8 194,124 - MPMX19_00185 0.46 +0.1 194,124 - MPMX19_00185 0.46 +0.6 194,124 - MPMX19_00185 0.46 +0.6 194,124 - MPMX19_00185 0.46 +0.7 194,124 - MPMX19_00185 0.46 +1.0 194,124 - MPMX19_00185 0.46 -1.2 194,124 - MPMX19_00185 0.46 +0.1 194,169 - MPMX19_00185 0.52 -0.2 194,204 + MPMX19_00185 0.57 +1.3 194,204 + MPMX19_00185 0.57 +0.4 194,204 + MPMX19_00185 0.57 +0.0 194,204 + MPMX19_00185 0.57 -0.1 194,204 + MPMX19_00185 0.57 -0.1 194,204 + MPMX19_00185 0.57 +1.5 194,204 + MPMX19_00185 0.57 -0.2 194,204 + MPMX19_00185 0.57 +1.0 194,204 + MPMX19_00185 0.57 -0.1 194,205 - MPMX19_00185 0.57 +0.4 194,205 - MPMX19_00185 0.57 -0.1 194,205 - MPMX19_00185 0.57 +0.0 194,205 - MPMX19_00185 0.57 -0.7 194,205 - MPMX19_00185 0.57 +0.6 194,205 - MPMX19_00185 0.57 -1.5 194,205 - MPMX19_00185 0.57 +0.4 194,205 - MPMX19_00185 0.57 -1.2 194,219 + MPMX19_00185 0.59 -0.7 194,219 + MPMX19_00185 0.59 +2.0 194,220 - MPMX19_00185 0.59 +0.8 194,261 + MPMX19_00185 0.64 -2.7 194,261 + MPMX19_00185 0.64 -1.3 194,262 - MPMX19_00185 0.64 -1.9 194,262 - MPMX19_00185 0.64 -0.6 194,287 + MPMX19_00185 0.68 +0.4 194,287 + MPMX19_00185 0.68 +1.7 194,288 - MPMX19_00185 0.68 -0.3 194,288 - MPMX19_00185 0.68 -1.3 194,288 - MPMX19_00185 0.68 +0.0 194,362 + MPMX19_00185 0.77 +0.3 194,362 + MPMX19_00185 0.77 +0.4 194,417 - MPMX19_00185 0.85 -1.8 194,434 + MPMX19_00185 0.87 -0.6 194,477 + -0.4 194,477 + -0.4 194,478 - -0.8 194,505 - -1.6 194,523 - -0.3 194,523 - +0.6 194,523 - -1.8 194,523 - -0.6 194,533 - +0.1 194,533 - -0.1 194,533 - +0.4 194,533 - +0.7 194,533 - +0.1 195,368 + +0.2 195,377 + +0.8 195,466 - -1.9 195,466 - +0.1 195,476 - +1.4 195,487 + +0.2 195,488 - -1.8
Or see this region's nucleotide sequence